EMLSAT00000000951, EMLSAT00000000951-696798 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000951
Unique Name	EMLSAT00000000951-696798
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1166	supercontig	LSalAtl2s1166:40390..44816 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000951 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000951	EMLSAG00000000951-683717	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000004209	EMLSAE00000004209-713137	Lepeophtheirus salmonis	exon
EMLSAE00000004210	EMLSAE00000004210-713138	Lepeophtheirus salmonis	exon
EMLSAE00000004211	EMLSAE00000004211-713139	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto770308	auto770308	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000951	EMLSAP00000000951	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1166:40390..44816+

protein sequence of EMLSAP00000000951

>EMLSAP00000000951 ID=EMLSAP00000000951|Name=EMLSAP00000000951|organism=Lepeophtheirus salmonis|type=polypeptide|length=520bp
MSAPEVIPAAEGEESGSIPKXXSSVSLSLSCSSATSKASSSIWPNSPEDY
ELREVIGXGAXAVVHAALCKPRNEKCAIKRINLEKWNTSMDELLKEIQAM
SSCNHENVVTYFTSFVFKEELWLVLRLLNSGSLLDIIRHKLKTQDCKSGV
LDEVTIATVLKEVLRGLEYLHNNGHIHRDIKAGNILLGSEGQVQIADFGV
SAWLXTGGEMNRAKSRHTFVGTPCWMAPEVMEQVTGYDYKADIWSFGITA
VELATGTAPYHKYPPMKVLMLTLQNXPPTLDTNAEDKEQYKAFGKTFRKM
ISECLQKDPSKRPTATELLKHQFFKSKAKDRKYLQQNIIASAPTIDSRSQ
KIKNPKRSGTSGRLHKNTEGDWVWSSDEDDDDDDDEETENPRPKKKSIAV
GGDSSTTKTKDSSRSPMVSSNIHKTLNLVLRMRNPKRELNDIRFEYQPSK
DTAEGIANELLGTSLIGKEDLSTMALNLKQLVTNPPPNKVMTFRVVTGFN
GNEEADEKSLLGFAQLSLTD

mRNA from alignment at LSalAtl2s1166:40390..44816+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000951-696798 ID=EMLSAT00000000951-696798|Name=EMLSAT00000000951|organism=Lepeophtheirus salmonis|type=mRNA|length=4427bp|location=Sequence derived from alignment at LSalAtl2s1166:40390..44816+ (Lepeophtheirus salmonis)
ATGAGTGCCCCTGAGGTTATACCCGCCGCAGAAGGAGAAGAGTCGGGCTC
CATCCCCAAANCCAKTTCTTCCGTAAGCCTATCTTTATCCTGCTCTTCCG
CCACATCTAAAGCCTCCTCATCCATTTGGCCCAATTCTCCCGAAGACTAC
GAACTCCGAGAAGTGATTGGCGKGGGAGCAMCTGCCGTAGTGCACGCCGC
ACTCTGCAAACCACGCAATGAAAAATGTGCYATTAAACGAATCAATTTAG
AGAAATGGAACACCTCCATGGATGAGTTGCTCAAGGAAATCCAAGCCATG
AGCTCTTGTAATCATGAAAATGTTGTTACTTATTTTACGTCCTTCGTGTT
TAAAGAGGAGCTCTGGCTCGTTCTACGTCTCCTCAACTCCGGCTCTCTTC
TCGACATTATACGACATAAATTAAAAACGCAGGATTGTAAGAGTGGAGTT
CTAGATGAGGTCACGATCGCAACTGTTCTTAAAGAAGTCCTTAGAGGCCT
GGAATATCTACATAACAACGGGCATATTCATAGGTAATACATGATATATT
CATTACATATATTTTTAGACTCAGTACTAGAATTAGGGTACATCTCATAA
GAAGTATTAAAGTTAATAATATCGTTGTCATTGATTTTGATGGCTTTTTT
TGTTTCATATATATATATATTGAAGAATTATTAGATTATATTATAATTTG
ATTGATTTCTCATATTGAAGATCTCTTATTCTACATATTTTACTGTAGAA
TTGTCATAATAGTGATTGAAGACATATATCAATTTATTACTAATAGAAGA
TGTGTTCATCTGTTGAGCAATAAATATTAAAATAATTTAGCTGTTATCGC
ATTTTTTTTTCTTATCAAATACTTGAGTAGTTGTTTATTTACTGTAACTC
GATTTTACACTTATGAGTTAAACTTTAAAAAGAATAAGATGATGATACCT
TCTAAATACTATATACATTTCTCGAGATGGTAAAACAATAACACCTCCTT
TCATCCAATGAATAACCATTTGATTTTATCTTCACAGAGATATCAAAGCT
GGAAATATCCTTCTTGGATCCGAAGGTCAAGTTCAAATTGCAGACTTTGG
AGTGTCTGCATGGCTCGKAACAGGAGGGGAAATGAACCGTGCAAAATCTC
GGCATACTTTTGTTGGAACGCCTTGTTGGATGGCTCCCGAGGTGATGGAA
CAAGTCACAGGATATGATTATAAAGCTGATATTTGGAGTTTTGGTATAAC
TGCTGTGGAGTTAGCAACTGGAACCGCTCCATATCATAAATACCCTCCTA
TGAAAGTCCTCATGTTGACTCTTCAAAACGAMCCTCCGACATTAGACACT
AATGCGGAAGATAAAGAGCAATACAAGGCCTTCGGGAAAACCTTTAGGAA
AATGATAAGCGAATGCCTACAAAAAGTAAGGGAATGTGGAGTTATCAAAT
AATGGGTCATTCTTGTTTGTTCAAGTCATATGAATCAGCCAATAATGAAG
AATTTTATTTCTTATTTTTTTATGTTGAATACCAGTTTCTTCTTATTTGG
TAAAATTATTTTGTTTTTTTCCTGATAAGGTCGAAAAAAATATGTACGAT
GTACATATATTATTTTTTACCTTTTTATAGGAAAGAAATATTATAATGCT
TTACTGTGTTGGCTTACACTATATTATGTAAGATCTCAGTTGTTCTTGGA
GCGTTAAGCTTTAATAATCTTGCACGATTTACCTTTACTGATAGTATGGG
CTTGTATTCATGTAGAGTAGAAACTCATAGCTCACTATTTTTATATTTTA
TTTTCCATATATGCGCTGACTCCCCACTTATTTGAGTCTGACGCCACCCT
AAAATAACAAAATAAGATGTTTCATAGATTGATATATCCCTATATTTTAA
GTATATCTATGTTTCCAGGATCCATCAAAACGCCCAACTGCAACAGAGTT
GCTGAAACATCAATTCTTCAAATCAAAGGCCAAGGATCGTAAATATTTAC
AACAAAATATAATAGCATCTGCTCCAACTATCGATTCACGTTCACAAAAA
ATTAAAAACCCCAAACGTTCAGGTACATCTGGGCGTCTTCATAAAAACAC
TGAAGGGGATTGGGTATGGTCCTCTGATGAGGACGATGATGATGATGACG
ATGAAGAAACCGAAAATCCCAGGCCAAAGAAGAAATCCATTGCCGTAGGA
GGAGACTCTAGTACCACAAAGACAAAGGATTCTTCCAGATCCCCTATGGT
TAGTAGTAATATTCATAAAACATTGAATCTTGTGTTAAGGATGAGAAATC
CCAAAAGAGAACTGAACGACATTCGATTCGAGTATCAACCCTCAAAAGAT
ACAGCTGAGGGAATCGCTAATGAACTTCTTGGGACTAGTCTAATCGGCAA
AGAAGACCTTTCAACAATGGCGCTTAATTTAAAGCAACTAGTTACTAATC
CCCCACCCAATAAGGTAATGACTTTCCGTGTGGTGACAGGATTTAATGGT
AATGAGGAAGCTGACGAAAAATCTCTTCTTGGCTTTGCTCAACTTAGTTT
GACGGATTAATTATTMCCTGCCATTATACATCACTGACTTTTTAAAATTA
TACATAAGGATAAATGCATTGAGATATATTTATATATTATATTATGTATT
AGTTCTGTCCCCTACACTACCCTATTATTAGAGAAAGGTTAATGAGTGAC
TTAAAATTTGTTTTCTTCTTAATATACATAATACCTTCAACTTCAATATA
TTTTCGTAGCTTATTATGATAACTTTACGTTTCTTTTTTGATTTTATCCC
ATGCCTTAAAAAATACATTTGGAGTATATATATATATATATANAAAAAAA
CAAAAAAAAAMAMAAAACACTTAAGTAGTATAATCCAGTGCTTTTATATT
AATTCATATTAAATTATGCAAAAAATGAGACGACGTTGAAAATAATTTAT
TTTCTTCAGGTTTTTATAAAAAGACCATTAAAGATACTCCATATCAATCC
ATGGCCATCAAAATGTTATTCATACTTACATATATAAGTTGAGACCTAAA
TATATAGTATTGCTAAGAGATGTCTCACTTACTTATCAATCAATACATAG
TATAAATTGTCCATTGGCCGCATATCGTATACATCTTTCTAATTAAGTGC
ATATCTTGTTTAATGAGAGCTAATTAAATAAAATTGATATTTTTTATATA
ACAATAGCTAGATGATTTTTCTTCCAAGTTTTGTGTGAATCAAGACCTAG
AATTAATATTATAATAGTTTATAACAAAGTGCGTGTTATTTGCTCATATC
ATTAAGTATTTATTTGAGTAAAATTACAAGAGTCATCTAATWCATAACAC
CTGGTCCCTATTATATATTTATATATGCTGAAGGGCCTGATAATCACTAC
TTTATGTTACAGGAGATCAAAAATATGTGATAATTTGAATTATTTTTTTT
CATTTTAATCAAAAACTCTTTCCTGAATTTTTTTACCTAATTAGATTTAC
TTAAAAAAAAAGAGGGAAAATTACTGGGATTTTGGCATCGTGGAACAGTA
TGTATACAACAAAAATAAATAAGAAATGTTTGTGCATGAATGACTCAAGA
GAAGCTCAAGTCCTTTGTAAGACGATCTAGTGTTGTAAGAATTAATTCCA
AATCAGGGGGGCTCTCCATTTCATGAGTTGAGTTTTTCCTATAAATGAGG
TCAACATCCTCACTTTGAATGGCAGAGCAAAGCTTTTTAGAATCTTCAGG
ATTCACTTCCTCATCCATGAGTCCATGAATTATCCGTACAGGACAATTGA
TGTTAATTGAATCTTTTTCAAGGGTTAAATGATATTGAAGGGAGTCTTCA
GCAAAATCTCTTTTTAGGAGAGCATCTCCAAACTTCCCATCCACAATGTG
AATGTCTCCTGTTTCAATCCTGTGTTGAATATCTGTTGGAAGAGTCTTGA
TATGCCTATGAATTTAATCAATTAATTAATGTAACTACTACTTATAACGA
GCCAGCTTTACCTTTGATAATAAGGATACACGTAGTTCATGGCCGGGGAT
AGGAGAATGAGACCATGGACTCTTTCTTTTAAACGTTCAGCTGCGAGAAC
AGATAGCCAACCTCCCATAGAGGAGCCAACAATGACAAGAGGGGAATTCT
CCGTTAATTCTTCAACTACTTTAATTGTATCTTCAACCCAATGACTAAAA
AGAACCTTGTCTTTATTACAAACCCCACTACGAGCGGATTCACCCATACA
TTCATGGTCATATATTATCCCAGGATGATCTGTTGTATCACAGAAGCGCA
TGATGCAACCCGCTTTCATTCCCGACATATGAGAATAGGAATGAAGTCCA
GGGACCATCAAAATCTAAAATAAAAGGCATCCAGTTACAGAATAATATTA
TAATAATTCATATTTATTAATGATGAA

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