EMLSAT00000000969, EMLSAT00000000969-696816 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000000969
Unique Name	EMLSAT00000000969-696816
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s116	supercontig	LSalAtl2s116:1255678..1260159 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000000969 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000000969	EMLSAG00000000969-683735	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000004287	EMLSAE00000004287-713215	Lepeophtheirus salmonis	exon
EMLSAE00000004288	EMLSAE00000004288-713216	Lepeophtheirus salmonis	exon
EMLSAE00000004289	EMLSAE00000004289-713217	Lepeophtheirus salmonis	exon
EMLSAE00000004290	EMLSAE00000004290-713218	Lepeophtheirus salmonis	exon
EMLSAE00000004291	EMLSAE00000004291-713219	Lepeophtheirus salmonis	exon
EMLSAE00000004292	EMLSAE00000004292-713220	Lepeophtheirus salmonis	exon
EMLSAE00000004293	EMLSAE00000004293-713221	Lepeophtheirus salmonis	exon
EMLSAE00000004294	EMLSAE00000004294-713222	Lepeophtheirus salmonis	exon
EMLSAE00000004295	EMLSAE00000004295-713223	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto780571	auto780571	Lepeophtheirus salmonis	polypeptide
EMLSAP00000000969	EMLSAP00000000969	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s116:1255678..1260159-

protein sequence of EMLSAP00000000969

>EMLSAP00000000969 ID=EMLSAP00000000969|Name=EMLSAP00000000969|organism=Lepeophtheirus salmonis|type=polypeptide|length=624bp
LYNDNSSSNDSQYFLYNYGRIKDQSIWLKFRLPLLGHIRFNPIVSFFSVV
LIWVFVASCIVMDPKELPFERIKVWIVENFTWLYIGTQDVWAIFIIVLYF
SKYSKIKLGCDDEQPEYNDATWFMMLFACGIGTGLFFYGIHAWIVYCLVG
LILGLLSYREGLPMTMKSCLYPLIGDKIFGWMGDLIDTVSVITTLFGVCT
SLGLGTKQLSKGFVIVVIIWIVTSIATISTLSGVGMGIRRLSEACFLLGV
FLMTKIIQLGFHCDAFEQSGESGGLEDRDRLLPEXNAPEQAXVHVWMNYW
TMFYWGWWTSWCSFVGMFIAKISKGRTIKQFINGTLTAPVLYSFLWLVIF
GGNGKNDVEKTWFDVMRAFGDIGFAFCLISLAGIVLYFVTSSDSGSLVID
CLSSNGDPDPPKIQRLFWAITEGATATALIVAGEDNEGLKMLQNAGLISG
LPFTLIVCLLCVSIWRYVKMVMGDLDVSGPKFKISLFDPFFTKPYLKWSK
GVFKNILYDSSNSFLLPFVALTFISLSIVCIATSVILTGFLALGFWWYLC
FITYMTIVRAKARKILNLTEGNIFEDFFASLFLYPCVSLQLRHQFLTPIL
VQEVVEVPQEGLESNHEEISITKM

mRNA from alignment at LSalAtl2s116:1255678..1260159-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000000969-696816 ID=EMLSAT00000000969-696816|Name=EMLSAT00000000969|organism=Lepeophtheirus salmonis|type=mRNA|length=4482bp|location=Sequence derived from alignment at LSalAtl2s116:1255678..1260159- (Lepeophtheirus salmonis)
CTTTACAATGATAATTCCTCATCAAATGACTCACAATATTTTTTGTATAA
TTATGGACGAATTAAAGTAAGTTTTAAATACTGTATACTTGATTTTTGTC
ATTCCGTATATTCCTTTCAAGGATCAGAGCATATGGCTCAAGTTCCGATT
GCCTCTTTTGGGTCATATTCGATTTAATCCCATAGTTTCATTTTTTTCCG
TTGTTTTAATATGGGTTTTTGTGGCCTCATGCATTGTGATGGATCCCAAG
GAGTTGCCATTTGAAAGAATTAAGGTTTGGATCGTTGAGAATTTTACATG
GCTCTATATTGGAACACAGGATGTATGGGCTATATTTATAATTGTCTTAT
ACTTTAGGTAACACAAATCTATATGTTGCAAAATAGTACTTAATACTTAA
TATTATTGTACACTTATAATTCAAAGTAAATATTCGAAAATTAAACTGGG
ATGTGATGACGAACAGCCAGAGTATAATGATGCAACTTGGTTTATGATGC
TCTTTGCTTGTGGAATCGGAACTGGGCTTTTTTTTTATGGTGTAGCTGAG
CCTATTTACCACTATACGACTGAAAATCGATACTATGCAGATCGGGCAAT
GACTGATAACATATTGGCTCAAAATAGTGTGAATGTCACACTTTATCATT
GGGGTACATTGCTTTGCTTTATTCATATACATAATTAGTTCTGTAAACAG
TGTTTATTTTTTAGGTGGTCCGTTAATTTGTAATTGGTAATATAAAAAAG
GGATTTTCTTTTCCTGAGCTGTTGTCATTATCACTATACTCTTGAGTAGA
TAACTTCCTTTCCTCAATAGATTCAATTATATTCCAAACCTGATTGAACA
TTTGTGTGTGCTCATAAAAGACGGATATTAACCTTGAGGATTTGTTGCAG
AGTTATAATTGTAAGTCCTTGTTTGACTCAGATTAGTAAAGTATCTCATT
TTACCATTTGAATTAGCTTAGTAAAACGATAAGTATCCTTAAAACACGTC
AATATTTCCGCATTATTCTTAATTTAGGCCTAATTAAACTATAAATTAGG
CATATTATACTCATCTAACATGATTATGGTGATGTCACTGATAGCTATCC
ATAATGTTGTCTTTTATCAAATATTGTTCTATAGACAATAATGAATAAAA
CATTTTGGCCGAACTGTAAAAATAAAAGAAACCAAAAATGAACGTCGTAA
TCCGAGAAGTTGAAGAATATGTTGGAATAGAGCAGCTTAGCTGTCATGAC
GTTGTGTTAAATCAGCTGCAATCCATCCGTGAGAGGAAGGAAATATATAT
ATATATTTCCATTATGTATATATCAAGGACGTAAAGGCTTGAATTACTTC
GATCCTCAATTCTACTCCAAGTCTAGCAAGGACTTACAACTCCCAATCAA
ACCTTCATTGTTTCTCTTTGCCTTTCATGAGCAAAAGCACTAGTTATTAC
TTTATACTTAGATGTTCTGTCTTCAAGAACTAATACAGCTTTGGAAAAGA
AAAAAAACCCTGTTCATATAGCCTACTGGAAAAAGCCAGTCCCGCTTTCT
AGCACATACTTTTTTGCCTCCGATTCGGACTAGTCCTTGTAATGAAGGAA
GGGGCGTCAAAATTTGGGACCGATATATCTCTGTTCTTACTATTAAAATG
ATTTTCTTATATAATGTTCGTACTCACATACAAACTTAAATAATTATTTA
TAGGGATTCATGCATGGATTGTTTATTGCTTGGTTGGACTCATCCTAGGT
TTGCTATCCTACCGTGAAGGCCTTCCTATGACAATGAAGTCCTGTTTATA
TCCCTTAATTGGAGATAAAATATTTGGTTGGATGGGGGATCTTATCGATA
CTGTCTCAGTTATAACCACTCTCTTTGGTGTTTGTACAAGTTTAGGACTT
GGAACTAAGCAGTTGAGTAAGGGTTTTGTCATAGTCAGTGGAATGGACCA
CCTTGAAGGAAAATTAACTGAGGTTAAACGTATGATTACAATCATCTCTT
ATCTATTGTATTTTTATTAGGTTGTTATCATTTGGATTGTTACATCTATA
GCAACAATCTCCACGTTGTCTGGCGTTGGAATGGGAATTCGGCGTTTATC
TGAGGCCTGTTTTCTCTTGGGCGTCTTTTTAATGACGGTTGCATTTATTC
ANTCCTCAATTTTTGATGAATCTATTTGTTCAATCCATTGGTTATTATTT
CCAGAAAATCATACAATTAGGATTCCATTGTGATGCTTTTGAACAGTCTG
GTGAGTCTGGAGGNTTGGAGGATAGGGATCGKCTCTTGCCCGAGRTAAAT
GCTCCTGAACAAGCTGRTGTTCATGTATGGATGAATTATTGGACCATGTT
TTATTGGGGATGGTGGACATCTTGGTGTTCCTTTGTTGGGATGTTCATTG
CAAAAATATCAAAGGGTCGAACCATTAAACAGTTCATTAATGGTACGCTA
ACTGCTCCTGTATTGTATTCGTTTTTATGGTTGGTTATCTTTGGAGGAAA
TGGTAATTATAGAGTGTGAACTTGTGGATACAAATCAAAACCTTTTTGTT
TACTCTAGGGCTTTTATTGGAGAGGACTTCTGCAGCTAAGGGATATTGTT
GTCTTCTAGAAGACCAAGGACAATCTTTTATGAATATTCCTCAAATAGAA
GCTATCATTGATACAAAATCACTCGCAAAGCAACCCATTATACATAATCA
ATCTGATTTTCTTTGTAGTGGGGATATAGGATGTGGTCCCTGTTCTTCAT
CTTTCTTAAAAATGAAAGAGGCATCAAATGAAACCTACGAAGACCTTTTG
AATGAGTATAAACTAATGAAAGACGATTTTGTCCGAGCAAGTCCAGATAG
GAAGTTCTCCAGGTATTAACCAAAGGTGGGCAGGAGTATTTACACAAGTT
TTGTTTTACTGCGTAGATTCTGCAAGCGGGATTTTTTCAACTAAGTGTTG
AGTTTTTTTGTGAGTCAAAGCATTTTTACACAACATTTATTAATAACATT
TTGCTCTCACTCTTCCAAATAAAGGCCGGGAGCAGCGACGCAAAGTGATC
CAGGATTTTTACTCGGCCGGTTCCACCACAAAGTACAACATATATACATT
ATCCAAAGTTATGAAACGGTGGCAGAAGCATCAAGCATCATGCTCCGTGC
AGTCCTCACAAGGTCAAAATCACACTTCAAAAAAGGTCACTCTGCGCGTT
CTCCGCCTTCCGTCGTAGCCTGGACTTCTTCATTAAAGCTAATGGCGGCC
ATATTCAGTAGAAAGTGTCCAGAAGTAGGCCCTGCAAATTGTTAAAAAAA
ACACCTCTACTCAGCTATGCTAAAAAAATATAATTATGGAGCTTCAAAGT
TTTGTGTAAATACTTCTSCCCGCCTCTGTCTTTATCCAAAGGCTGTGAAT
AATGATAGTAACTCTACAAACTTTAGATTATCATGCAACATCAAAGGGAA
AAATGACGTAGAGAAAACATGGTTTGACGTCATGAGAGCCTTTGGGGACA
TTGGTTTTGCATTTTGTCTAATATCCTTAGCCGGGATTGTCTTGTATTTT
GTCACTTCTTCGGACTCGGGATCTTTAGTGATCGATTGTCTCTCTTCAAA
TGGTGATCCTGATCCACCCAAGATACAACGTTTGTTCTGGGCCATTACGG
AAGGAGCTACTGCAACTGCACTCATCGTCGCCGGAGAAGATAATGAGGGT
CTTAAAATGCTTCAAAATGCAGGTCTGATATCGGGGCTTCCATTCACACT
TATTGTGTGTTTGCTATGTGTATCTATATGGAGGTAGAGAGGCTTTTTAG
GATAAATAATACTAGGGGATTCAAATGTCTTTATTTTTTTTGTATTTGTA
GGTACGTTAAAATGGTCATGGGAGATCTGGATGTGTCAGGGCCCAAGTTT
AAAATTAGTCTCTTTGATCCTTTTTTCACAAAACCCTATCTTAAATGGAG
TAAGGGAGTCTTTAAAAATATGTATTTTTTTGTTTATTGAAGTTATAATC
GAGGTTTGTCTGGCTCCTTTGACCATTGGGAAAGTGGCTGKCATGTAAGA
TACATTACTTTGTTCATAGAGACGTCACATTGTTCTTTCTTTCAACAATA
ATTATACAATTCTTTTGATTTCAGATTATACGACTCATCAAATTCGTTTC
TTCTTCCATTTGTTGCTCTAACCTTCATTTCCCTAAGCATTGTTTGCATC
GCAACTTCTGTTATATTAACTGGCTTCTTGGCCCTTGGCTTTTGGTGGTA
TCTCTGCTTCATTACCTATATGACAATTGTGCGAGCAAAAGCCAGAAAGA
TATTAAACCTGACGGAAGGAAATATTTTTGAAGACTTTTTCGCCTCATTG
TTCCTATATCCTTGTGTTTCATTACAGCTGAGACATCAATTTCTAACACC
AATCCTAGTCCAAGAAGTCGTGGAAGTCCCTCAAGAAGGGTTGGAGAGTA
ATCACGAAGAAATCTCAATTACAAAAATGTGA

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