EMLSAT00000000972, EMLSAT00000000972-696819 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000972
Unique NameEMLSAT00000000972-696819
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s116supercontigLSalAtl2s116:1362434..1363722 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000972 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000972EMLSAG00000000972-683738Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004314EMLSAE00000004314-713242Lepeophtheirus salmonisexon
EMLSAE00000004315EMLSAE00000004315-713243Lepeophtheirus salmonisexon
EMLSAE00000004316EMLSAE00000004316-713244Lepeophtheirus salmonisexon
EMLSAE00000004317EMLSAE00000004317-713245Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780687auto780687Lepeophtheirus salmonispolypeptide
EMLSAP00000000972EMLSAP00000000972Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000972

>EMLSAP00000000972 ID=EMLSAP00000000972|Name=EMLSAP00000000972|organism=Lepeophtheirus salmonis|type=polypeptide|length=362bp
MIQSDKSISIIGSGNWGSTIARIIGSTVLQHNTIFKPTVNMWVKDELIDG
KSLVDIINQTHENVKYLPGKKLPYNVIAVSDIVKATATADFIVFVLPHQF
IKSTCSLLKGKLKSNVKGISLIKGFEKHPEGGLKLISQTLKETLDIPISV
LMGANIAHEVADEMFCETTIGCSEGEETENIYKLLFSTSNFRVVVVKDET
TVEICGALKNIVAVGAGFIDGLKMGDNTKAAVIRLGLMEMIRFTELFFST
PASSMSTFFESCGVADLVTTCYGGRNRRVAEAFVQSNKSIAELELEMLGG
QKLQGPETAXEVHHMLKKRNMEDQFPLFTSVYRICEGKIKVHKLIDSLRS
HPEHIVKADAHL
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mRNA from alignment at LSalAtl2s116:1362434..1363722-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000972-696819 ID=EMLSAT00000000972-696819|Name=EMLSAT00000000972|organism=Lepeophtheirus salmonis|type=mRNA|length=1289bp|location=Sequence derived from alignment at LSalAtl2s116:1362434..1363722- (Lepeophtheirus salmonis)
ATGATTCAAAGTGACAAAAGTATATCCATCATCGGATCCGGTAATTGGGG
ATCGACCATAGCTAGAATCATAGGTTCAACTGTACTTCAGCATAATACTA
TTTTCAAACCTACTGTCAACATGTGGGTCAAGGATGAGTTGATTGATGGA
AAAAGTCTAGTGGACATAATCAATCAAACGCATGAAAACGTTAAGTATCT
TCCTGGTAAGTGGATATCAATCTGTATATGTATACATATGTGACTATTAC
CACGTATTTGTTACCTCCATTAATATAGGAAAGAAACTACCATATAATGT
TATCGCCGTCTCGGATATAGTTAAAGCAACTGCAACGGCAGACTTTATAG
TATTTGTTTTGCCTCATCAATTCATTAAATCAACTTGCTCTTTACTTAAA
GGAAAATTGAAATCCAATGTCAAAGGGATCTCTCTAATAAAGGGTATTTG
GTCTCTTTTATCTTCAATCTACATAATATTGAGTTAACATTAATCAAATT
AGGATTTGAGAAGCACCCAGAAGGAGGACTCAAATTAATCTCTCAAACAC
TAAAGGAAACGCTCGATATTCCAATTTCTGTTCTTATGGGAGCAAATATT
GCTCATGAGGTGGCAGATGAAATGTTTTGTGAGACCACAATAGGATGTTC
TGAAGGAGAAGAAACAGAAAACGTAGGATATACTTCAAATAAATAGATAT
TCATATGTTCATTTCCCTTCACTTTCTACTTTAATTTCAGATTTATAAGC
TCCTCTTTTCAACATCCAACTTTCGAGTTGTTGTCGTCAAGGATGAAACA
ACAGTAGAGATATGTGGAGCTTTAAAAAATATAGTTGCGGTAGGTGCAGG
ATTCATTGACGGACTGAAAATGGGGGATAATACAAAGGCTGCTGTCATAA
GACTTGGTCTTATGGAGATGATACGTTTCACAGAATTATTCTTTTCAACT
CCCGCCTCATCCATGTCCACGTTTTTTGAGAGTTGTGGAGTTGCGGATCT
AGTAACAACATGCTATGGGGGTCGTAATAGACGTGTTGCAGAAGCTTTTG
TACAATCAAACAAAAGTATAGCAGAGTTAGAGTTGGAAATGTTGGGAGGT
CAAAAGCTTCAGGGCCCTGAAACGGCGGSTGAGGTTCATCATATGTTAAA
AAAAAGAAATATGGAAGATCAGTTCCCCTTGTTTACATCCGTTTACCGAA
TATGTGAGGGGAAAATTAAAGTACATAAATTAATTGATAGTTTACGATCA
CATCCGGAGCATATTGTCAAAGCAGACGCTCATCTTTAA
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