EMLSAT00000000983, EMLSAT00000000983-696830 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000983
Unique NameEMLSAT00000000983-696830
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s116supercontigLSalAtl2s116:1924518..1926575 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000983 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000983EMLSAG00000000983-683749Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004354EMLSAE00000004354-713282Lepeophtheirus salmonisexon
EMLSAE00000004355EMLSAE00000004355-713283Lepeophtheirus salmonisexon
EMLSAE00000004356EMLSAE00000004356-713284Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780901auto780901Lepeophtheirus salmonispolypeptide
EMLSAP00000000983EMLSAP00000000983Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000983

>EMLSAP00000000983 ID=EMLSAP00000000983|Name=EMLSAP00000000983|organism=Lepeophtheirus salmonis|type=polypeptide|length=644bp
MWIRPRSLTRSLFLRLVASCYAMAFTSLYIQIPGLYGKNGVSPVHKNNDG
RSDSFWDRPTLVWLVVDLLGISHEHSLDLMCIVGTLISCVSIFVRGFLGM
YEGKSMVKHKNDEGIPFSLFFLGGRFLWFQWDILLLEVGFLCILVAPFRE
DGKSRPWDRLNMECVRWLLFRMMFANGLVKLTSECPSWWNLTAMPLHYES
QCIPTPASWFTFNLLPESFHKFSVAXTFMIEIPMTFLFYAPTVGLRRFSY
SQQIFLMIIIMVTGNYNFFNFLFMALCISLSDDSWWNKALRTKRHFLVRF
VFSCFNISVILSLVTGFVYYFMNDKYEFEIQFKLKELKXFXAITTSFGIA
VAAFFFLLSILEMIILIINSLKQGFFTFLQNLYWGSIYGLMAAGIFIKSV
PVFVGGLDGAIMPPIIAQMDTTILDRLDSFHLVNSYGLFRRMTGVGGRPE
VVILGSDDRQNWEEYQFLYKPGNITAMPRYVLPHQPRLDWQMWFIALQGK
FNLDRWFVTMCHRFLQGQRTVLDLLDRRNNPFDKRAPPKYLKAHLYHYHF
TTSSEDITKQWWTRELIDPEFINIIDEPTIKNYLXKIDXRPXVTEMRTNQ
SLKKSLNWLRVRTNEFEPHIVVWTLSMLYLPVISKIVFGWIRIF
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mRNA from alignment at LSalAtl2s116:1924518..1926575-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000983-696830 ID=EMLSAT00000000983-696830|Name=EMLSAT00000000983|organism=Lepeophtheirus salmonis|type=mRNA|length=2058bp|location=Sequence derived from alignment at LSalAtl2s116:1924518..1926575- (Lepeophtheirus salmonis)
ATGTGGATCCGTCCCCGGTCCTTAACCCGGAGCTTGTTTCTCCGTCTCGT
AGCGTCATGCTACGCTATGGCATTTACATCACTCTACATTCAGATACCGG
GCCTGTACGGTAAGAATGGAGTGTCTCCTGTTCATAAGAACAACGATGGT
CGCTCGGACTCCTTTTGGGATAGACCAACACTGGTTTGGCTCGTTGTGGA
CCTCCTTGGGATCAGCCATGAGCATTCATTGGATCTCATGTGCATCGTGG
GGACTCTTATCTCCTGTGTTTCTATTTTTGTTAGAGGCTTCCTGGGMATG
TATGAGGGCAAATCCATGGTGAAGCATAAGAATGATGAGGGGATACCATT
CTCTCTTTTCTTTCGTTCCAGGTGGGAAAATGGGATTTCTCCTCAATTGG
ATATTGTATTTATCTTTATATCAAGTGGGGGGAAGATTTCTGTGGTTCCA
ATGGGATATTTTACTATTGGAAGTGGGGTTTTTATGTATCCTGGTTGCAC
CTTTCCGTGAAGACGGAAAGAGCAGGCCTTGGGATCGTTTGAATATGGAA
TGTGTTCGTTGGCTCCTGTTTCGTATGATGTTTGCCAATGGTCTTGTCAA
ATTAACGTCAGAGTGTCCATCATGGTGGAACTTAACGGCAATGCCTTTGC
ACTATGAATCTCAGTGTATACCCACACCTGCTTCTTGGTTTACATTTAAT
TTACTCCCAGAAAGCTTTCATAAATTCAGTGTGGCTTMGACATTCATGAT
TGAAATTCCCATGACGTTCCTTTTTTATGCTCCTACTGTGGGCCTACGAA
GATTTTCTTACAGTCAACAAATATTTCTCATGATAATAATTATGGTAACG
GGGAACTATAACTTCTTCAATTTCCTCTTTATGGCATTGTGCATCTCTTT
GTCTGATGACTCCTGGTGGAATAAAGCTTTAAGAACGAAAAGGCATTTCT
TGGTCAGATTTGTTTTTAGTTGCTTCAATATTTCTGTAATTCTGAGTCTA
GTCACTGGATTTGTCTATTACTTTATGAATGACAAATACGAATTTGAGAT
TCAATTTAAACTGAAAGAGCTTAAACKCTTCWTAGCCATTACAACCTCTT
TTGGAATAGCCGTTGCCGCATTTTTTTTTCTTCTTTCTATTCTGGAGATG
ATCATTCTTATCATTAATTCCCTTAAACAGGGGTTTTTCACTTTCCTACA
AAATTTGTATTGGGGATCAATATATGGTCTTATGGCTGCGGGMATCTTTA
TTAAAAGTGTGCCCGTGTTCGTTGGTGGGCTTGATGGGGCAATAATGCCT
CCAATTATTGCACAAATGGATACAACTATTCTAGATAGGTTAGATAGTTT
TCATCTTGTGAATTCATATGGGCTTTTTCGCCGAATGACAGGTGTTGGAG
GTAGGCCTGAAGTTGTTATTTTGGGATCTGATGATCGACAAAATTGGGAG
GAATATCAGTTTCTCTATAAGCCTGGAAATATAACTGCAATGCCTCGATA
TGTTCTTCCACATCAACCACGCCTTGATTGGCAAATGTGGTTCATTGCTC
TCCAAGGAAAGTTTAATCTCGATAGATGGTTCGTCACGATGTGTCATCGT
TTTCTACAAGGTATGTTTCTTATTTTTCTAATACGCGACTATAAACTAAT
GTGATGATGGGTTATATTTTAGGCCAACGCACTGTTCTAGACCTTTTAGA
TAGACGTAACAATCCCTTTGATAAAAGGGCTCCTCCCAAATATTTAAAAG
CGCATCTCTATCATTATCACTTTACTACTAGCTCTGAAGACATAACAAAG
CAATGGTGGACACGAGAATTAATCGATCCTGAATTCATTAATATAATTGA
CGAGCCCACTATCAAAAACTATTTGGAWAAAATCGATTKAAGRCCGKAAG
TCACAGAAATGCGCACAAATCAAAGTTTGAAAAAGAGCTTAAATTGGTTA
AGGGTCAGAACAAATGAATTTGAGCCTCACATTGTCGTTTGGACATTATC
CATGTTGTATTTACCTGTCATATCTAAAATCGTATTTGGTTGGATCCGAA
TATTTTGA
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