EMLSAT00000000984, EMLSAT00000000984-696831 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000984
Unique NameEMLSAT00000000984-696831
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s116supercontigLSalAtl2s116:1926863..1929443 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000984 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000984EMLSAG00000000984-683750Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004357EMLSAE00000004357-713285Lepeophtheirus salmonisexon
EMLSAE00000004358EMLSAE00000004358-713286Lepeophtheirus salmonisexon
EMLSAE00000004359EMLSAE00000004359-713287Lepeophtheirus salmonisexon
EMLSAE00000004360EMLSAE00000004360-713288Lepeophtheirus salmonisexon
EMLSAE00000004361EMLSAE00000004361-713289Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780903auto780903Lepeophtheirus salmonispolypeptide
EMLSAP00000000984EMLSAP00000000984Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000984

>EMLSAP00000000984 ID=EMLSAP00000000984|Name=EMLSAP00000000984|organism=Lepeophtheirus salmonis|type=polypeptide|length=570bp
MKEKEPYAQRLLSNLNALRLEGTLCDVEILSATEDEFVYAHRSVLAAASP
YFHAMFNGGLAENNKETIVLRSLDANTLRGLIGFIYSGSLPLNHENVQEI
LISADMIGLPEVVNLCTDYLVSEMDSSNVISVYLFASDHHCLDLKSISER
FIFENFVSVSKESEEFATLSKDILLSFLKSENLRVDSETQVFIAAMDWIT
TDISKRRRFVFDIIKYIRLPLVPLTFIDSYIQDTPDISLKVALSSVKRDM
INGKGNLVSSLSPIPREAAKRNIYLIGGGRREIRSAWTRSEFTFHTVEMF
DTFASKWKKATTMKVGRILPGLAILNGKIYVCGGELESEIFANGEIYDPI
QNSWSSMAPMTIPRCEFGMTALNEFIYAFGGWVGEDIGGSIERYDPRSNQ
WTVIAEMLVPRFSMGIISYEGLIYIVGGCTNTRMHMQELVSFNPETNEWT
NHASMLVPRSQMGCAVLEHHLYVVGGTNRKNDVLQSVERYSXNENKREEI
PPMSEHXARPXVAXANGKLYVFGGDQINDVNFYRSRTTISSSEVFDPATN
SWKESVSLPESRSEAGAIVL
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mRNA from alignment at LSalAtl2s116:1926863..1929443+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000984-696831 ID=EMLSAT00000000984-696831|Name=EMLSAT00000000984|organism=Lepeophtheirus salmonis|type=mRNA|length=2581bp|location=Sequence derived from alignment at LSalAtl2s116:1926863..1929443+ (Lepeophtheirus salmonis)
TAGACTTCCAGCTTCCTCAAAAAAACATTTACTAGTTATTGTCTTCATTC
TTCATCTATTCCTTGTTGCTTTTACTTATTATTAGTACATAAAAGGATCC
TTTTTTCCTTGCATCTCTCATTTTGTTTCTGTTTGTCACTCTCTCTCTCT
CTCTCTTTGCTTTTTCCTCTTTCTCTTTGTTCCCCTGTCACTGAGAGAAT
CCTCTCCTCAGTTGTTGAACAATCGACCTTCCGTACTTTCACTAGGTCTG
GATCGAATTGTCATCCTCCTTTGTCCAGTTTGCAATACGAACTATTAACT
CAAATCCTTCTATTTTCCCTTCCAAGGATCCTTTTCTTGTGACTCTTTAT
TTATTTTATAGCAATGAAGGAAAAAGAGCCGTATGCCCAAAGACTTTTGA
GTAATTTGAACGCATTACGGTTGGAAGGGACCCTCTGCGATGTTGAGATC
CTCTCTGCAACGGAAGATGAGTTTGTTTACGCTCATAGAAGTGTTTTGGC
GGCGGCAAGTCCCTACTTCCATGCCATGTTTAATGGGGGACTCGCAGAAA
ATAACAAGGCTAGTTCCAAATATATGATCAATAATAATATTTCCTACACT
TTGATATATTAATTCGTAGTTCGAATCACTTCCAATTCTCTTCACCTTAT
TATTATGCCATGTTTTTTTTCTAACAAATTGTAGCTTAAAATGAGTCCCG
GATGTGTAAGATATTCCATGAGAAGAGAATTCATGGAATGTCCAAAGCAT
CACAAGAAGAATATGAAAATGATAAATAAATAATTAATAAGATGTCCAAA
AGTAGGAAGGCCTTAAATGTGCCCATGCCCTCCCATTAGAAGGATATATG
CATGCATCTTTAATATCCTAAAAAATATGAAGATATCAAAATAGTACATA
ATTATAAAACAATGACTAATTAATTAATTATATAAATACGTTGAACAGGA
AACAATTGTTTTACGATCGCTTGATGCCAACACTCTAAGAGGATTAATTG
GTTTTATATACTCTGGATCTCTTCCACTCAATCACGAAAATGTCCAGGAA
ATCCTCATATCAGCAGATATGATCGGATTGCCGGAAGTTGTGAACCTATG
CACTGACTACTTGGTTTCAGAAATGGACTCTTCCAACGTTATTAGTGTAT
ATTTATTTGCCTCAGATCATCATTGCCTGGATCTCAAATCAATCTCCGAA
CGATTTATTTTTGAAAATTTTGTGTCTGTATCTAAAGAATCAGAAGAGTT
TGCTACTTTATCCAAAGACATTTTACTTTCGTTTTTGAAAAGTGAGAATC
TACGTGTTGACTCCGAGACTCAAGTATTTATTGCTGCGATGGATTGGATC
ACTACTGATATTTCCAAGAGGCGACGCTTTGTCTTCGATATCATCAAATA
TATTCGCTTACCATTAGTGCCTTTAACTTTTATTGATTCATACATTCAGG
TAATTTAAGCATACCTATTTTCTTGTAATGTGTTTAATAATTAATGAAAT
CCTTAGGATACTCCGGACATATCCTTAAAAGTGGCTTTAAGTTCTGTAAA
GAGGGATATGATAAATGGAAAAGGGAATTTGGTGTCATCTTTGTCTCCTA
TCCCAAGGGAAGCAGCAAAAAGAAACATATATCTTATCGGAGGMGGAAGA
AGAGAGATCCGTTCGGCTTGGACACGATCTGAGTTTACTTTTCATACTGT
TGAAATGTTTGATACATTTGCATCAAAGTGGAAAAAGGCAACTACAATGA
AAGTTGGAAGGATTTTACCTGGGTTAGCCATTCTAAATGGAAAAATTTAT
GTTTGTGGGGGAGAGCTGGAATCAGAAATTTTTGCTAATGGCGAAATTTA
TGATCCCATTCAAAACTCTTGGTCAAGTATGGCACCCATGACCATTCCTC
GGTGTGAATTTGGAATGACGGCTCTAAATGAATTTATTTATGCATTTGGA
GGATGGGTTGGTGAGGACATTGGTGGGAGTATAGAGAGATATGATCCTCG
ATCTAATCAATGGACGGTGATTGCCGAAATGCTTGTACCTCGCTTTTCTA
TGGGCATCATTTCATATGAGGGTTTGATTTACATTGTTGGAGGTTGTACA
AATACACGCATGCACATGCAGGAGCTTGTCTCATTTAATCCAGTAGGTCG
AAATCTCATTCATTTTCAAAGGTCTTAAATCATTATTGCATTACTTTAAG
GAAACGAATGAATGGACCAATCATGCAAGTATGTTAGTGCCACGGTCACA
AATGGGATGCGCAGTACTGGAGCATCACTTATATGTAGTGGGGGGTACAA
ATCGGAAAAATGATGTCCTTCAATCCGTTGAAAGATATTCATTKAATGAA
AATAAAMGGGAGGAAATTCCTCCAATGTCAGAGCATSGAGCTAGRCCAMG
CGTAGCASCTGCCAATGGGAAGCTCTACGTTTTTGGAGGTGATCAAATCA
ATGATGTCAATTTCTATAGATCACGCACCACAATTTCCTCCTCAGAAGTA
TTTGATCCCGCTACAAACTCTTGGAAGGAGTCAGTTAGCTTGCCTGAAAG
TAGATCGGAGGCTGGTGCAATTGTTTTGTAA
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