|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s116 | supercontig | LSalAtl2s116:1931796..1938447 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000985 >EMLSAP00000000985 ID=EMLSAP00000000985|Name=EMLSAP00000000985|organism=Lepeophtheirus salmonis|type=polypeptide|length=1692bp
MTSRVSGIKSGESTTQLLDPELVQKIVDELKSQGTFDQFRKDCMAEVDTK
PGYQNLRQRVSNSLNKFLDRQQWKPTQNKNVLRNQLRKHIEDSGIMENGV
RRIVDQVVNPKILSVIEPEVEYVMYNILGVEKPSNNPELTNGNEEKASSV
SSEDIEMHSVQDNSDEDDKKKKGAEESESSSPNIAGHISPLTPERKKESQ
SPVFQGNISPLXPPPALPRDHHDDPGSPHTPPLPPLPPPPMYMPPPPQLS
XFREXPPPPPPLPPPPPPLPTGSMSPVSDTELADLSPPEDSPDTPSSESG
LLSPPPPLPPPPFLKRPPSPLTSPIGSSPDIGTPPLPPPPPPPPLDHPPP
PLPVSSSGHSDISDTDLPCPSSDEKSSDVDIEDLEKAREAILAKMAEASL
GKEDSDEGEFHTEDDEHDGAKKRGSTKVIPEMNNPPSILTDTDMSPISDD
SSSHTDKEKKVDDHDEAKKWDNNKADKTSSDEDDSKASMNNNSLHRESGS
SKTQTGESSSKTDESNNKKTTSKEDHHHHKHHHKSSRHRDSDDNKRYDKH
SSHSSSNNKDKHKEKSKKDLKKMEKIEQKVNKAITLKSDKFKDIDMFAPK
APXPKPPLHRPPSSTSSSSAGGSPLPSFGGKSPLSSFGSRSPLPSFGASK
SPLSWGSKTPPTFGSPNNSSTTSSSSNVKSPSSSMSPKSNAVPKVSIPTV
KPNPVVKKNSDSATKSSKEAPIKHIKELPSGHEKFSATIIERAKIYPEIP
VSKPGTDKVKQHENDIADSKRRLEEARARKLKEQQKEEHMKKERKRLEKK
HEKFSRVCKTDSDDDDTDWESKSYKKEDVVMEMRRRRTSSTSSSGCEFKS
QRSRTNSTREDENSFHGFLNKSLDSLEMRSSLLKKVIQTDEDNLDAAELD
DNEIISINGLSDPERVAALLKKHYGGNPKVVHRPPYWLXCKLKXWSVPFE
DVGLMTFTKPSAIKGKSKWNFLSEDKFSLKRKINKEKCNSRSFQQKRAKR
NSKDGDELEREMNAIHSDKPTLWPSNPFHGFESTELLPPSLEPKSSFLQT
NLWTQEMKSVFFDSNQESLMTFSSDLFDYDDGEIVSTKHALNLIIKPNFG
HDYLDTDLPTSPSSLDSDDKGSSSPSSSKENFEEQQSRKKSRFTSNKFIN
VISLGQAADHPCYDPHHLIGWLNSHQNKNVALMCRQEVSDELVTTKAFAF
YKEGLHSCIPRSFFTNTKFDSLGRPIGRGYCNYQTVNSDSSHSLDQKSFC
ININADVKSISGSFVKGYPEGKVRVQFSNGDFLEGRSVHGVIHGKTRIYG
PNNKLKFVGTYINGYPSGWCWIFSNDFKTSGMIYVYFDEKGVLQKDKIIY
LNSSFQGGHLGSLENDTVLVIKEDVQLISSEEENCVQQLQFSVSEKTREF
LILPVIIRDIDSVMGLFLRSNNIYMFNRVAKTGSQSITQLLVALKPESGV
DVQIDKRPVEFLMESYDAVKNFLSIIDRETKPTVFVRHYNFVDFTKYGYS
WTPIYINMVISWFYYQRASWNIVERIQTFPQEPLPDSKYLRKDFPSCVLD
PNDDECNFIEGTSNVDYPDHRSQMMAFCGHELYCADFNSKAVLQKAKENV
ERFYPVVGVIEALNESLTVFENQFPNLFPGAVELYHSNQGIKDKRIINNL
KPVIPSEIIDILNRNFTRELEFYDFCKQRLARQYEAIKLILK back to topmRNA from alignment at LSalAtl2s116:1931796..1938447- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000985-696832 ID=EMLSAT00000000985-696832|Name=EMLSAT00000000985|organism=Lepeophtheirus salmonis|type=mRNA|length=6652bp|location=Sequence derived from alignment at LSalAtl2s116:1931796..1938447- (Lepeophtheirus salmonis)
ATGACGTCTCGAGTGAGTGGGATCAAGTCTGGAGAATCCACGACGCAATT
GCTTGATCCGGAGCTGGTCCAAAAGATAGTGGATGAATTGAAGTCCCAGG
GGACTTTCGACCAGTTTCGCAAGGATTGTATGGCGGAAGTGGACACGAAA
GTAAGTTTAGTGCGGGTCTTTGGAGAGTTGTCACCTTATGTTGGGGTTCC
TTTTTTAGCCGGGATATCAGAATCTGCGTCAGCGCGTGAGCAATTCCCTC
AACAAGTTCCTGGACCGTCAGCAATGGAAGCCCACGCAAAATAAAAATGT
GCTTCGCAATCAGCTCCGCAAACATATCGAAGAGTATTTGAATTTGGGGT
GTTGGAGTGGCCTTGGGCCTCCTCCTTCTCACACTTTTGATTTAATGCGC
AATTTCACTATCTTTTAGCTCCGGGATCATGGAAAATGGTGTGCGGCGCA
TTGTGGACCAAGTGGTGAATCCCAAGATTCTGTCAGTGATTGAGCCGGAG
GTGGAATATGTGATGTACAACATTTTGGGAGTGGAGAAACCCTCCAACAA
TCCAGGTTCGAATGGGATTCCATTCCATTTCTAATGTTCTCGCTTCCTCA
TTCTATCTCTCTTTTTCCCCCAACCCTAGAACTGACAAACGGAAACGAGG
AAAAGGCCTCCAGTGTTTCTTCCGAGGACATTGAGATGCATTCCGTCCAG
GGTACGAAAATCTCTCGTATATCTCTCATTTTTATATCTATCTATTTCTA
ATATTTAATTAAGACAATTCTGATGAGGATGATAAAAAGAAGAAAGGGGC
TGAGGAATCTGAGTCCTCATCTCCTAATATAGCTGGTCATATCTCTCCAC
TAACTCCAGAAAGGAAAAAAGAATCCCAATCTCCTGTATTTCAAGGAAAC
ATTTCTCCATTGKCCCCACCTCCAGCATTGCCCAGAGACCATCATGACGA
TCCAGGTAGTCCTCATACTCCACCCTTACCACCCCTTCCACCTCCTCCAA
TGTATATGCCNCCACCTCCTCAACTCAGTGKCTTCCGTGAAGAKCCTCCG
CCGCCKCCTCCTCTCCCGCCTCCACCACCACCTTTGCCTACGGGTAGTAT
GTCCCCTGTAAGTGATACGGAACTTGCAGATCTTTCGCCTCCTGAGGACT
CTCCAGACACGCCAAGTTCTGAAAGCGGACTCCTTAGTCCACCTCCTCCT
TTGCCCCCACCTCCATTTCTAAAGAGACCTCCCTCCCCATTGACCTCTCC
CATCGGCTCAAGTCCGGATATTGGTACCCCTCCGCTCCCTCCKCCCCCKC
CTCCGCCTCCTTTAGATCACCCTCCTCCCCCACTACCTGTGTCYTCGTCT
GGGCATTCCGATATTTCGGATACGGATTTACCTTGTCCATCCTCGGATGA
AAAGTCATCTGATGTTGACATAGAGGATCTTGAAAAGGCGAGGGAAGCAA
TACTTGCCAAAATGGCTGAAGCCTCTTTAGGCAAGGAGGATTCAGATGAA
GGAGAATTTCATACTGAAGATGATGAGCATGATGGTGCAAAGAAACGGGG
TTCAACAAAAGTTATTCCCGAAATGAACAACCCCCCATCCATTCTCACTG
ACACGGATATGTCGCCCATTAGTGATGATAGTAGTAGTCATACTGACAAA
GAGAAAAAGGTGGATGATCACGACGAGGCCAAGAAATGGGATAACAATAA
AGCCGACAAAACGTCTTCAGATGAAGATGACTCAAAAGCTTCAATGAATA
ATAATAGTCTTCATCGAGAATCAGGATCATCCAAGACTCAAACAGGTGAA
TCATCATCCAAGACGGATGAAAGCAATAACAAAAAGACAACTTCCAAGGA
AGATCACCATCATCATAAGCATCACCACAAGTCATCCAGACATAGAGATT
CAGATGATAATAAAAGATACGATAAACACTCTTCTCATTCATCTTCCAAT
AATAAAGATAAACACAAAGAAAAATCAAAGAAGGACCTAAAGAAAATGGA
AAAAATTGAGCAAAAAGTAAACAAGGCAATCACGCTTAAGTCTGACAAAT
TCAAGGATATTGACATGTTCGCTCCTAAAGCKCCTAAKCCCAAGCCTCCA
CTTCATAGACCTCCTAGTTCTACTTCAAGCTCTTCAGCGGGTGGGTCTCC
CCTTCCTAGTTTCGGGGGTAAATCCCCTTTGTCTTCATTTGGTAGTAGAT
CTCCATTACCATCCTTTGGTGCATCAAAATCTCCACTTTCTTGGGGATCA
AAGACACCTCCCACTTTTGGCTCCCCAAATAATAGTTCTACCACCAGCAG
CAGCAGCAACGTCAAGTCACCTTCCAGTTCCATGTCTCCAAAAAGTAATG
CAGTACCTAAGGTTTCAATCCCCACTGTAAAACCCAATCCCGTTGTCAAG
AAAAATAGTGATTCGGCAACAAAGTCTAGTAAAGAAGCCCCCATTAAACA
CATTAAGGAACTACCAAGTGGGCACGAAAAGTTTTCGGCTACGATAATTG
AGCGAGCTAAGATATATCCTGAAATACCCGTATCCAAGCCAGGAACTGAC
AAAGTAAAACAACATGAGAATGACATTGCTGATTCTAAGCGTCGTTTGGA
GGAAGCCCGAGCCAGGAAATTAAAAGAACAACAGAAAGAAGAACATATGA
AAAAGGAACGAAAAAGGTTAGAAAAGAAACATGAAAAGTTTTCAAGAGTG
TGTAAAACGGATTCTGATGATGATGATACGGATTGGGAATCAAAATCTTA
TAAAAAAGAGGATGTTGTGATGGAAATGAGAAGAAGAAGAACAAGTAGTA
CCAGTAGTAGTGGTTGTGAATTCAAGTCTCAGCGTTCGAGAACGAATTCT
ACTCGTGAAGATGAAAATTCTTTCCACGGATTTTTGAATAAGAGCTTAGA
TTCCTTAGAGATGCGATCATCTTTGCTTAAAAAGGTTATTCAGACAGACG
AAGATAATTTAGATGCTGCAGAATTAGATGATAATGAAATCATTTCAATC
AATGGTCTCTCTGATCCTGAAAGAGTAGCTGCCCTGCTCAAAAAACATTA
TGGAGGTAATCCCAAGGTTGTACATCGGCCTCCTTATTGGCTGGYATGCA
AGTTAAAAYACTGGAGCGTCCCGTTTGAGGATGTTGGCTTGATGACATTT
ACAAAGCCCTCAGCCATTAAAGGCAAGAGTAAATGGAATTTTTTGAGCGA
GGATAAGTTTTCTCTTAAACGTAAGATTAATAAAGAAAAGTGCAACAGTC
GTAGCTTTCAACAGAAAAGGGCGAAAAGAAACAGCAAAGACGGGGATGAA
TTGGAGAGGGAAATGAATGCAATACATTCAGATAAGCCAACATTATGGCC
TTCAAATCCCTTCCATGGGTTTGAGTCAACAGAACTTTTGCCTCCATCCC
TAGAACCTAAATCAAGCTTCTTGCAAACTAATTTATGGACTCAAGAGATG
AAAAGTGTATTTTTTGACTCAAATCAAGAATCACTTATGACTTTTTCATC
AGATCTCTTTGATTACGACGATGGAGAAATTGTCTCAACTAAGCACGCAT
TAAATTTAATTATTAAACCTAATTTCGGTCATGATTATTTGGACACTGAT
TTACCAACTAGTCCATCCTCTTTAGACAGTGATGATAAAGGTTTGTCTCT
TCTCCATTTTTATTTAATTAATAAGGATAAAAGGGATTTTACTTTATGTT
TTTTCTCTCTGCTTTTTCTAGGTTCAAGTAGTCCAAGCAGTTCAAAAGAA
AACTTTGAGGAACAGCAATCAAGAAAAAAATCAAGATTTACCTCCAATAA
ATTCATTAATGGTAATTTATTTTAAGCTGTTTATTCTAGTGCTTTCTTTA
TTAAAATATTTATCTTTCAACCAAAATGGGGGAAGAAAAGGATGATTGAA
AAGGAAAAAGTAAATTGGTTTGAATTTGAAATTTTGTTAACATTTTTTTG
TCTTATATGTAAATTTACATGCTTGAATATTTGATATGTTATAAACATTA
CACATATTCAAGAAGTACACTCTCTGCCTTCTTCCTATCTATTGTTTCCC
TCCCAGCCCATAAATTTACTTGGAGAAAGGAGTAATTTACAGTAAAAGTT
CAATGACTCTTAAATTTAAATTCATTTTGCGTTTTAATCCTTCTCCTACA
CGGTTATAGTCAGTTTGATTTATTTCTTCCAAATCATATTGTGCTATTGA
TAGGCACTATATATATATTTATCCAAATGTAAATAAATGTGCTTGTAATA
ATTATATTAATTAGTATTTTATGAAACATCTAATATAACATTTCAAATTT
TTCGTTTCTTATAGAAAAATCTGTGATCCCAAGAACAAGGCGAAACGTTG
CGGTTCTTAAAAAAATGACCTCGTAAATTTTCATTAAGAATAATAAGCTT
TTCTCCTTTTGCAATGTAAAACATGATTAAATTATATATATTAATTAGTT
ACTTATATGTTATGTATATAATAATTAATATGCTGTATTGTCTTATTTTC
GCAGAATTAATACAAGTTCAAGTATCCTAGTTAGTGTATCTACTCTTTTT
TTTTAAGTCATTAGAAATAAATGAAATATAGGTAGGTAGTTATTTATGTA
CAAAGCATTACATGTCAAGTTGTACCTTGCTTGAAACCAAACAGAACTGT
TGTTGATATAAAATTTCCATCGTAGTGCGGATGCGGTAGTATACGTTTAG
TTTGAAGTTAATCGTTGACATTGATGTACTGGAGTAGTAGATTCACAATG
GGATTCCGTGGCTTTCTCTTCATTGCTATGAGTGAGTAGTACCTACTTTT
CTTCAAATACGCGATCGGGATTCATTTACAGCTACATTAAATCTTTTTTT
TGTTTTTTTCCCCCAAGTGATTTCCCTGGGCCAAGCGGCGGACCATCCAT
GCTATGATCCTCACCATCTAATTGGTTGGTTGAATTCTCATCAGAACAAA
AATGTGGCATTGATGTGTCGTCAAGAAGTATCCGATGAGTTGGTTACAAC
CAAAGCCTTTGCATTTTATAAAGAAGGACTTCACTCCTGTATACCTCGTA
GCTTTTTTACGAATACTAAGTTTGACTCTCTTGGACGGCCAATTGGTCGT
GGTTATTGTAACTATCAGACCGTAAACTCGGACAGTTCTCACTCATTAGA
TCAGAAAAGTTTTTGTATTAACATTAATGCGGATGTCAAGTCAATTTCTG
GTAGTTTTGTTAAGGGCTATCCTGAAGGGAAAGTTCGAGTACAATTTTCT
AATGGTGATTTTTTGGAGGGGCGATCTGTTCATGGAGTTATTCATGGTAA
AACTAGAATTTATGGCCCCAATAACAAGCTCAAATTTGTAGGTACCTATA
TAAATGGGTATCCCTCGGGTTGGTGTTGGATATTTTCAAATGATTTTAAA
ACGAGTGGAATGATATATGTGTATTTTGACGAAAAGGGTGTACTACAAAA
AGATAAAATCATTTATCTCAATTCTAGTTTCCAAGGCGGTCATTTAGGTA
GTCTGGAGAACGACACCGTTTTAGTGATTAAAGAGGACGTACAATTAATA
AGTTCTGAAGAGGAGAACTGTGTACAACAACTCCAATTTTCTGTATCTGA
AAAGACACGCGAATTCCTTATTCTCCCCGTTATTATTAGAGATATTGATT
CAGTCATGGGGCTTTTCCTTCGTTCCAACAATATCTATATGTTTAATCGT
GTGGCAAAGACGGGGAGTCAATCCATAACACAACTTCTTGTTGCATTAAA
GCCTGAGTCGGGTGTGGACGTTCAAATCGACAAGCGTCCTGTAGAGTTTC
TTATGGAATCCTATGATGCAGTTAAAAACTTTCTGAGTATAATTGATAGA
GAAACAAAACCAACAGTGTTTGTCAGACATTACAACTTTGTGGACTTTAC
TAAATATGGCTATAGTTGGACACCAATCTATATTAACATGGTTCGAGATC
CTATAGAGAGGGMAAATAATCAGAATTATCAGGTTGTTAATAGTTATAAT
TTCATTAATAAAATCATATCTTCTTAGGTTATATCTTGGTTTTATTATCA
AAGAGCATCATGGAACATTGTTGAACGGATCCAAACTTTTCCACAAGAGC
CTTTGCCAGATTCAAAGTATTTAAGAAAAGATTTTCCGTCTTGTGTTTTA
GATCCTAGTATGGATACATATTCTATATTGCGACATTAATCCAAATATTC
TCAATAAATAATATATTCTTCTTTCAGATGACGATGAGTGCAATTTTATA
GAAGGTACGTCAAATGTTGATTACCCGGATCATCGAAGTCAAATGATGGC
ATTTTGCGGTCATGAGCTTTACTGTGCAGATTTCAATTCTAAAGCAGTGT
TGCAGAAAGCAAAGGAAAATGTGGAAAGATTTTATCCAGTTGTTGGGGTT
ATTGAAGCTCTCAATGAATCTCTCACTGTCTTTGAAAATCAGTTCCCAAA
TCTTTTCCCTGGTGCTGTGGAATTATATCACTCAAACCAAGGAATAAAAG
ATAAAAGAATAATCAATAATTTAAAGCCTGTTATTCCTTCTGAAATCATT
GATATACTTAATAGAAATTTTACTCGAGAATTAGAATTTTACGATTTTTG
TAAGCAAAGACTGGCTAGACAATATGAAGCAATAAAGCTTATTCTTAAGT
GA back to top
|
