EMLSAT00000000986, EMLSAT00000000986-696833 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000986
Unique NameEMLSAT00000000986-696833
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s116supercontigLSalAtl2s116:1939029..1940320 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000986 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000986EMLSAG00000000986-683752Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004371EMLSAE00000004371-713299Lepeophtheirus salmonisexon
EMLSAE00000004372EMLSAE00000004372-713300Lepeophtheirus salmonisexon
EMLSAE00000004373EMLSAE00000004373-713301Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780909auto780909Lepeophtheirus salmonispolypeptide
EMLSAP00000000986EMLSAP00000000986Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000986

>EMLSAP00000000986 ID=EMLSAP00000000986|Name=EMLSAP00000000986|organism=Lepeophtheirus salmonis|type=polypeptide|length=369bp
MITIHKYVMESKSKLKTLECILMQSILENVVDQLAVVGGTMIHPSELDED
WASIPHPNATQEDLGSLLRKENELFQKKLRSAQLDPSLTDDAPAIKAYSI
QKVYREVRNVQMMLEKTIQELKTRGTSTTLKRAVHQYKERMKEKRMIGYK
AKSIGNEITNLRXKIXXAIKTTDNLLLSESTKIAQLKDHLLDVRKVCKIE
QDFMSQYFFQHESQYIRDLKTTEKELLNEKSKVKEEIEYEKKVTAEIEEC
LRGKLNTLTKLHKTWCLRLQEDVKVKDEELQKLKKARIQDQSTYKLALIR
LKEITEFVENEKKNLERSRLEKEQYNMEIRAIIRIQSWWRMSMVRKGLGP
YKKRKKRVQDHSVSLKKGK
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mRNA from alignment at LSalAtl2s116:1939029..1940320+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000986-696833 ID=EMLSAT00000000986-696833|Name=EMLSAT00000000986|organism=Lepeophtheirus salmonis|type=mRNA|length=1292bp|location=Sequence derived from alignment at LSalAtl2s116:1939029..1940320+ (Lepeophtheirus salmonis)
TAAATATAGAAATTATATGATTACCATACATAAATATGTAATGGAGAGCA
AGTCCAAGTTGAAAACGCTTGAATGCATTCTTATGCAGTCCATTCTTGAG
AATGTTGTGGATCAATTGGCAGTTGTGGGGGGAACAATGATTCATCCCTC
CGAACTAGATGAGGATTGGGCATCTATTCCTCATCCAAATGCTACTCAAG
AAGATTTAGGAAGTCTTTTGCGCAAAGAAAATGAGCTTTTTCAAGTAGTA
CTCTTTTTTTTTTTTTCTTAATAAATAAGGGTTAATCTTACTAAAATAAC
ATTTTAAATTTTTTTCATACATTTTTTTTTTAAAGAAAAAATTAAGAAGT
GCACAGTTAGATCCCAGTTTAACGGATGATGCCCCAGCCATAAAAGCATA
TTCTATACAAAAAGTATATAGAGAAGTTCGGAATGTGCAAATGATGTTAG
AAAAGACAATACAAGAATTGAAAACTCGGGGAACAAGTACTACTCTCAAA
AGAGCAGTCCATCAATATAAGGAGAGGATGAAAGAAAAGCGAATGATAGG
GTATTTTGTACAAGGTTTGATTGCTAAATATGAAACTTACTAAGAATACA
TAATTTAGATACAAGGCAAAGTCCATTGGAAATGAAATCACCAATCTAAG
GTAKAAAATAGWAYAAGCCATTAAAACAACGGATAATCTATTACTTTCGG
AGAGCACCAAAATTGCACAGCTGAAAGATCATTTACTGGACGTCCGTAAA
GTCTGCAAAATCGAACAGGATTTTATGTCCCAATATTTTTTTCAGCACGA
GAGCCAATATATACGAGACCTTAAGACCACTGAAAAAGAGTTGTTAAATG
AGAAAAGCAAAGTGAAGGAGGAGATTGAATATGAAAAAAAGGTCACGGCT
GAAATAGAAGAATGTCTTAGAGGGAAATTAAACACTTTGACTAAACTCCA
TAAGACTTGGTGTCTCAGATTACAGGAGGATGTTAAAGTCAAAGATGAGG
AACTTCAAAAGTTAAAAAAGGCCCGGATTCAGGACCAAAGTACTTATAAA
CTCGCCCTGATTCGTTTGAAAGAAATCACCGAGTTTGTTGAGAATGAAAA
AAAGAATCTGGAGAGAAGCCGGTTGGAAAAAGAGCAATATAATATGGAAA
TCCGTGCAATTATTCGCATTCAGTCATGGTGGAGGATGTCTATGGTTCGA
AAAGGACTGGGTCCTTATAAGAAAAGGAAAAAGCGAGTTCAAGATCACTC
AGTTTCTCTCAAAAAAGGAAAATGATAAAAACACTAATTAAT
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