EMLSAT00000000991, EMLSAT00000000991-696838 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000000991
Unique NameEMLSAT00000000991-696838
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s116supercontigLSalAtl2s116:1961290..1963414 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000000991 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000000991EMLSAG00000000991-683757Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004393EMLSAE00000004393-713321Lepeophtheirus salmonisexon
EMLSAE00000004394EMLSAE00000004394-713322Lepeophtheirus salmonisexon
EMLSAE00000004395EMLSAE00000004395-713323Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780920auto780920Lepeophtheirus salmonispolypeptide
EMLSAP00000000991EMLSAP00000000991Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000000991

>EMLSAP00000000991 ID=EMLSAP00000000991|Name=EMLSAP00000000991|organism=Lepeophtheirus salmonis|type=polypeptide|length=631bp
MTTMDETTGEDGIRIHFRTPEKITKPKSSEDISSPSATESNIKEKSIPSK
KPGSSNNQEVISGLFTGNPNIPSLDNLGNSKDSLPQESLFSQSQFDGHGI
HPYIIKNLDSMGISRPTAVQSATIPRILAGKDVLVKXQTGSGKXLAXALP
LLHSLQAITPQIHRDSGFFARIVPGVLHGGEKRKSEKARLRKGLNILVST
PGRLLDHIHKTKTLDLSKIHYLVFDEADRMLDLGYERDVNDIINAISENS
SEEIKRQTILLSATLTQGIRQLSEVSLKHPDYVDITSTDGNSVMAISDDL
QVDTAVPENLQQTFIVVPAKLRLITLSSFILWKCGGKSMKKILIFLATQD
MVDYHHTLFEQSLYSEEGKNIKFMKLHGNMDQGERTKVFNDFREIDSGVI
SSGLVLLCTDVAARGLDLPKVDWIVQYNPPISTADYVHRIGRTARIGLKG
SSLLFVLPSETGFLHEVENQKLARFVELTVDRVLEKVFPSDKRRSLEQAA
TNLQLKMETLIVEDSQLKEMGSQAYVSFIRSYASYPKEVRHLFCFKDLHL
GHIAKSFGLRDAPTKITGIGKSGNWLKKQELRKKNAFIKREDRVVKSQRK
RIDQRALIMSEYSSGFDDMDEKPPSKKRHKK
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mRNA from alignment at LSalAtl2s116:1961290..1963414+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000000991-696838 ID=EMLSAT00000000991-696838|Name=EMLSAT00000000991|organism=Lepeophtheirus salmonis|type=mRNA|length=2125bp|location=Sequence derived from alignment at LSalAtl2s116:1961290..1963414+ (Lepeophtheirus salmonis)
ATGACAACCATGGACGAGACGACTGGTGAGGATGGGATTCGAATACATTT
CCGGACTCCAGAGAAGATTACGAAACCCAAGTCCTCCGAAGATATTTCTT
CTCCATCAGCTACAGAGTCGAATATAAAGGAGAAATCCATCCCTTCGAAG
AAGCCAGGAAGCTCAAATAATCAGGAAGTTATATCGGGGCTCTTCACTGG
GAATCCTAATATCCCGTCTCTTGATAACCTTGGAAATTCAAAGGACTCCC
TCCCTCAAGAATCCCTTTTCTCTCAATCTCAATTTGATGGACATGGAATC
CATCCCTACATAATCAAAAACCTTGATTCGATGGGTATATCGCGTCCAAC
AGCTGTACAATCTGCTACAATTCCAAGAATTCTTGCTGGAAAAGATGTGC
TGGTTAAARCCCAAACAGGGAGTGGTAAAKCCCTCGCGTKCGCCCTTCCA
TTACTTCACTCCCTCCAAGCTATTACTCCTCAAATCCATCGTGATTCTGG
ATTGTACGCTCTTATTGTCGTACCTACTCGAGAATTAGCACTTCAAANNN
NNNNNNNNNTTTGTCAAACTCGTTCGAAGTTTCGCTCGAATCGTTCCAGG
TGTTTTACATGGTGGAGAAAAAAGAAAATCTGAAAAGGCACGATTGCGCA
AAGGCTTAAATATCTTGGTGTCTACACCAGGACGATTGTTGGACCATATT
CACAAAACAAAGACGTTGGACCTATCAAAAATACATTACTTAGTTTTTGA
TGAAGCGGATCGAATGTTGGATTTGGGATATGAGAGAGATGTTAATGATA
TTATAAATGCAATCAGTGAGAATTCTTCTGAAGAAATAAAAAGGCAAACT
ATTTTATTATCTGCTACACTCACACAAGGGATTAGACAATTGTCAGAAGT
GTCTTTAAAGCATCCAGATTATGTTGATATTACATCTACCGGTAAGTTGT
CTTTTAATGGCTTTCAGGTTCTCTATTTTCTAATGTTTTGTACTTATATT
TAGATGGAAATTCTGTAATGGCTATATCTGACGACCTTCAAGTTGACACG
GCTGTGCCTGAAAATCTTCAACAAACATTTATCGTAGTACCAGCAAAGCT
TCGCCTTATCACGTTATCTTCTTTTATTTTATGGAAATGTGGAGGAAAAT
CCATGAAAAAGATTTTGATATTTCTTGCTACGCAAGATATGGTAGACTAT
CATCATACCCTATTTGAACAATCTCTTTATTCTGAAGAAGGAAAAAACAT
AAAATTTATGAAATTGCATGGTAACATGGACCAAGGAGAACGAACAAAGG
TTTTCAATGACTTTAGAGAAATTGATAGTGGCGTTATATCATCTGGACTT
GTACTACTATGCACTGATGTTGCTGCAAGAGGACTTGACCTTCCAAAAGT
GGACTGGATCGTTCAATATAACCCTCCCATTTCCACAGCAGATTATGTTC
ATCGGATTGGTCGAACGGCTAGAATAGGTTTGAAAGGGTCATCTCTATTG
TTTGTTTTACCAAGTGAAACTGGATTTCTACATGAAGTAGAAAATCAGAA
ATTGGCACGTTTTGTAGAATTAACGGTTGACAGAGTTTTAGAAAAAGTGT
TTCCATCAGATAAACGCAGATCGCTTGAACAAGCAGCGACTAATTTACAG
TTAAAAATGGAAACTTTGATAGTGGAAGATTCCCAACTAAAGGAAATGGG
TTCTCAGGCCTATGTTAGTTTTATTAGATCATACGCGTCTTATCCTAAAG
AAGTCAGACACTTATTTTGCTTCAAAGATCTACATTTAGGTCACATTGCT
AAATCTTTTGGACTTAGAGATGCACCTACGAAAATAACTGGAATTGGTAA
AAGTGGAAATTGGTTGAAGAAGCAGGAATTGCGCAAGAAAAATGCATTTA
TCAAGAGAGAAGACAGAGTCGTCAAGTCTCAGAGGAAGCGTATTGATCAA
AGAGCTCTTATTATGTCGGAATATTCCTCAGGCTTTGATGACATGGATGA
AAAGCCTCCTTCAAAAAAGAGACATAAAAAATGATTACTAAATATTTTTT
TCTTTTATATATAATATGTGTGATACTTATTTTTTTTTTTAATTAATATG
AGCAATATATGGAAACTATAACAAG
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