|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s116 | supercontig | LSalAtl2s116:2019208..2023897 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000000995 >EMLSAP00000000995 ID=EMLSAP00000000995|Name=EMLSAP00000000995|organism=Lepeophtheirus salmonis|type=polypeptide|length=1178bp
MAGGNSKKSKKDKYDKKRKKRDPFVAEESSNTHPNASGNYSLSGEGGEEK
DWVPNAAGINVEETEETNANEDEFGAKDFRSQMVLRPDHESRPLWVAPNG
HIFLETFSPVYKHAHDFLIAISEPVCRPEVIHEYKLTSYSLYAAVSVGLQ
TSDIIEYIARLSKSTLPEGIVKYIQMCTLSYGKVKLVLKHNKYFVESNFP
ECLQKLLKDPVIQQCRLKRNDVTTTTDLGQEDELIHEEITKTNIPQFVXT
VNTKKTSEEKTEEESKINEKAVPEDITDFYEKLDADEDEDEAXTTKTVSF
EVDQEKLEVLQKRTMELDFPLLAEYDFRNDTLNPDINIDLKPMAVLRPYQ
EKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTACCTVRKKAMVLCNSGVS
VEQWKQQFKMWSTADDAMICRFXSDAKDKPMGCAILITTFNMITHTQKRS
WEAEQTMKWIQDQEWGIMVLDEVHTIPAKMFRRVLTQVHSHSKLGLTATL
VREDDKIADLNFLIGPKLYEANWLELQKEGFIARVQCAEVWCEMTPEFYG
EYLTIASMKKMLLCVMNPHKFRATQFLIKYHEKRNDKIIVFSDNVFALKH
YATKLHRPFIYGPTSQNERIQILQNFKYNPKVNTIFVSKVADTSFDLPDA
NVLIQISSHGGSRRQEAQRLGRILRAKKGAIADEYNAFFYTLVSQDTSEM
SFSRKRQRFLVNQGYAYKVVTKLTGMEEDNELSYKTKEERLQLLTQILAS
TDTDLDEERDLKGVGGFQRRTGNMASMSGADDNVYSEMRRSVSAYNGGDK
IDDSNCTAVYQNRCTCGYGHYPYWKPTESLYIVNCTNSGFTSTEMLEDLD
ERIQILIFTGNKLPELEWNIFGFFEKTGNLEVVDMSHNQIEEIPGKTYHR
VGFVRKLILSHNNLRISGANSHPRLFSNFYELEELDLRNTFSETVDAGYY
LKDLKDVFISSNMTKLRKLNLEQNEIWEIQDKNMFCILPSLRELYIGDNQ
LQSIDIALNCLKKLTLLDVRYNKIKRLDKETIDRLEQAFGNGSGRLIMNE
NPFHCDCHLRPFYDWVFNTKANINKEDLRCYDGWPKGNAGRRLSSITKLE
CPPDPLTEESKMAVSTSITQALLLILLLLVATLLSVFIWVNRAQFKGQLA
PVVKSVQKSMQYKTINRDDEIIAPEVNV back to topmRNA from alignment at LSalAtl2s116:2019208..2023897- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000000995-696842 ID=EMLSAT00000000995-696842|Name=EMLSAT00000000995|organism=Lepeophtheirus salmonis|type=mRNA|length=4690bp|location=Sequence derived from alignment at LSalAtl2s116:2019208..2023897- (Lepeophtheirus salmonis)
ATGGCTGGTGGAAATAGTAAGAAGTCGAAGAAGGACAAATACGATAAGAA
GCGGAAGAAACGTGATCCTTTTGTTGCCGAAGAGAGCAGCAATACTCATC
CCAATGCGAGTGGGAATTATTCTCTGAGCGGCGAGGGAGGTGAAGAAAAG
GATTGGGTGCCCAACGCAGCCGGGATCAATGTGGAAGAAACGGAAGAAAC
AAACGCGAACGAAGATGAGTTTGGAGCCAAGGATTTCCGCTCTCAAATGG
TTCTTCGGCCTGACCATGAGTCCAGACCTCTTTGGGTTGCTCCAAATGGA
CACATCTTCCTGGAGACCTTTTCGCCCGTGTACAAGCACGCACATGACTT
CCTCATTGCCATTTCGGAGCCTGTTTGTCGCCCAGAAGTGATTCATGAAT
ATAAACTCACCTCTTATTCCCTCTACGCCGCAGTGAGCGTAGGACTTCAG
ACCTCAGACATTATTGAGTATATCGCTCGACTCTCCAAATCCACTCTTCC
AGAAGGGATTGTGAAATACATTCAAATGTGTACACTTTCATACGGAAAGG
TCAAATTAGTTCTCAAACACAACAAGTATTTTGTGGAATCTAATTTCCCG
GAGTGTCTACAAAAGCTCCTTAAGGATCCTGTCATTCAGCAATGTCGCCT
TAAAAGAAACGATGTGACCACTACAACGGATCTGGGACAGGAGGATGAAC
TCATTCACGAAGAAATCACTAAGACCAACATTCCCCAATTTGTCYCCACA
GTCAATACAAAAAAAACAAGCGAAGAAAAAACAGAGGAAGAATCCAAAAT
TAATGAAAAGGCTGTGCCTGAGGATATTACTGATTTTTATGAAAAATTAG
ATGCAGATGAGGACGAGGATGAGGCTGSAACAACTAAAACAGTTTCATTT
GAAGTGGATCAAGTAAATAGATTGATTTTGTTTTTTAAAATAATCACCTT
TTAGTTTATTTTTGCTTGAATCTAGGAAAAATTGGAAGTACTTCAAAAAA
GAACAATGGAATTAGATTTCCCATTGTTGGCAGAGTATGATTTTCGAAAT
GATACCCTGAACCCTGATATTAACATTGATCTTAAGCCCATGGCTGTACT
TCGTCCTTATCAAGAAAAGTCTCTTCGTAAAATGTTTGGTAATGGTCGTG
CTAGATCAGGTGTCATTGTTTTACCTTGTGGTGCTGGCAAATCTTTAGTA
GGTGTCACAGCCTGTTGCACAGTTCGAAAAAAGGCAATGGTACTCTGTAA
CTCAGGTGTGTCTGTTGAACAATGGAAGCAACAATTTAAAATGTGGTCCA
CGGCTGACGACGCCATGATATGTCGATTTMCCTCCGACGCCAAAGATAAA
CCGATGGGGTGTGCTATCCTCATTACTACATTTAATATGATCACGCATAC
GCAAAAGAGGTCATGGGAAGCTGAGCAAACTATGAAATGGATTCAAGATC
AGGAGTGGGGAATCATGGTTTTAGATGAGGTACATACGATTCCTGCTAAA
ATGTTTCGACGTGTTCTTACGCAAGTTCATTCACATAGTAAGTTGGGTTT
GACGGCAACTCTTGTTCGAGAAGATGACAAAATTGCTGACCTTAATTTCT
TGATTGGCCCAAAATTGTATGAAGCTAATTGGTTAGAGCTTCAAAAAGAA
GGATTTATTGCAAGGGTACAGTGTGCAGAAGTTTGGTGCGAAATGACCCC
TGAGTTCTATGGGGAATATCTAACAATAGCATCTATGAAGAAAATGCTTT
TGTGTGTCATGAATCCACATAAATTTCGAGCAACACAATTTCTCATCAAA
TATCATGAAAAGCGAAACGATAAGATTATTGTTTTCTCTGATAACGTGTT
TGCCTTGAAACACTATGCCACCAAATTACATAGACCTTTTATTTATGGTC
CCACCTCTCAAAATGAACGTATTCAAATCCTGCAAAATTTTAAATATAAC
CCTAAAGTGAATACAATCTTTGTGTCAAAGGTTGCAGATACATCCTTCGA
TTTGCCCGATGCCAATGTCCTCATTCAGATATCTTCCCATGGTGGCTCSC
GTCGTCAAGAGGCGCAACGACTGGGKCGAATTCTTCGTGCTAAAAAAGGA
GCCATTGCTGACGAGTATAATGCATTCTTCTACACTCTAGTTTCCCAGGA
TACGAGTGAAATGTCCTTCTCGCGAAAGAGACAAAGATTTTTGGTCAATC
AGGGGTATGCCTACAAAGTTGTGACCAAGCTCACGGGAATGGAAGAGGAT
AATGAATTGTCCTACAAAACAAAGGAAGAAAGACTTCAACTTCTCACTCA
AATACTCGCTTCAACTGACACGGACTTGGACGAAGAAAGGGACTTGAAGG
GTGTTGGAGGATTTCAGAGACGCACTGGGAATATGGCATCCATGTCTGGA
GCAGATGATAATGTTTATTCTGAAATGCGTCGTAATAAAAGTGGAGCCAA
ACATCCACTATTCAAAAAGTTCAAGCGATAAGCATTTGTAATACCTTGTC
AGTTGCGTTTATGATTTTTCATTTATGTCTTATGTATAAATTATGATGTA
CCTACTCTTATATTTTCTGTTGCTCATATAATAAACTATTTTATTCTATT
ATTTTTTCATACTTTTTATAATTTTCAAGTATTGACAGTTTAATTACTAA
TTAGGTATGGCTTTGTCATGGAAGATCTATTGATCTTTTTAACATTATTC
TGGATACATCTCCCCTAGTGTTCATGTGAACATATAACCTAATTTCATGT
CCATGTCTCTTGAAAATGTGTTACCTCATTTAACGCAATGCGGGTAGAGT
ACGTATGTTTTTTTCAATTTATCCACGTAAAGTTCTGGATTATTATTATA
TTACCAATATCGTGGTAACAAAATAATATGTTGACACATTACTTTTACWT
TTTCATGATGGTCCCAACTTTCATTMCKTAGCCGTAATCATCAGGGGGAA
GGGCCTCCCAATAATTTTATCAGTAGTAGTATTTGTTGTTCCATTAATGG
CGAGTTAATTCAATCGGCCCTGTAATTATAATTGGTTTCAAATACTAGTT
TTGGCCTCACATTTCATACATCATAATGTCCAGACTTCTGAGTCATTCTA
CTCATCGAAGAAGAAATGTCACTCGGTAAGTACGTCTGAATGCTGATTGA
ATGGATTGTATTAAATTTAGATGCACATAAATAAAAGTGTCGCTCGCCCA
TATAAAAGAGAGGAGAAGGCGCTCTGGCTGTATAACATTGGAAGTCTCCC
CACTATTTAAGGTAAATTCCTGAGTGCTAGGGCAGCTATGTTTAAAGGTG
GTTGTAGGATTGGTTCGATGTTATTATAAAGTTGTGTAAAAGATGAAGGG
TTGTCACTGGAAATTATTAATATTACTCATAGTAGGATCCGTAAGTGCCT
ACAATGGTGGAGATAAAATCGATGACTCTAACTGTACGGCTGTCTATCAA
AATCGATGTACCTGTGGATACGGGCATTATCCCTATTGGAAACCTACAGA
ATCGTTATACATCGTCAACTGCACAAACTCTGGGTTTACTTCGACGGAAA
TGTTAGAAGACCTAGATGAAAGGATTCAAATCCTCATTTTCACGGGTAAT
AAACTTCCAGAATTAGAATGGAACATTTTTGGATTCTTTGAGAAAACTGG
GAACTTAGAAGTGGTGGATATGTCTCATAATCAAATTGAAGAAATTCCAG
GAAAAACTTATCACCGTGTGGGCTTCGTTAGGAAGTTAATACTCAGTCAT
AATAATCTTAGAATATCGGGAGCTAATTCACATCCGCGTCTCTTTTCTAA
TTTTTACGAATTAGAAGAGCTTGATCTACGTAACACATTCTCTGAAACAG
TTGATGCAGGTTATTATCTCAAAGATTTAAAAGATGTTTTTATTTCCTCA
AACATGACAAAGCTTAGAAAGCTTAATTTAGAGCAAAATGAAATATGGTA
TGTAGTACCCCACATCATAATGATTAAATTTAAAGCTATTAAATAATGTC
TGAAACTATGTATATTTTTATAGGGAAATCCAGGATAAAAATATGTTTTG
TATCCTTCCATCTCTCAGAGAATTGTACATCGGGGATAATCAGCTTCAAT
CCATCGATATTGCTCTGAATTGTTTAAAAAAGTTAACACTACTTGACGTT
CGATACAATAAAATAAAACGTTTGGATAAAGAAACTATTGATAGATTGGA
ACAAGCTTTTGGAAATGGTAGTGGTAGACTCATTATGAATGAGAACCCAT
TTCACTGCGATTGTCATTTAAGACCCTTTTATGATTGGGTCTTTAATACT
AAAGCAAATATTAACAAAGAGGTACTCACTTTTTTAAAGGAGAATTTGTA
TTTTGAAGCTCATACTCCTTTATTTCTATAGGATTTGAGATGTTATGATG
GTTGGCCTAAAGGCAATGCTGGACGAAGACTAAGCAGTATTACCAAACTT
GAATGTCCTCCGGATCCATTGACAGAAGAGTCGAAGATGGCTGTGAGCAC
ATCCATTACTCAGGCCCTTCTCCTAATTCTTTTACTTCTTGTAGCTACTC
TTCTTTCTGTATTTATATGGGTTAATAGAGCCCAATTTAAGGGCCAGTTA
GCTCCTGTAGTTAAAAGTGTTCAAAAGTCTATGCAATATAAAACTATCAA
CAGAGATGATGAAATCATTGCTCCTGAAGTGAATGTCTAA back to top
|
