EMLSAT00000001013, EMLSAT00000001013-696860 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001013
Unique NameEMLSAT00000001013-696860
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s116supercontigLSalAtl2s116:686034..688893 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001013 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001013EMLSAG00000001013-683779Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004494EMLSAE00000004494-713422Lepeophtheirus salmonisexon
EMLSAE00000004495EMLSAE00000004495-713423Lepeophtheirus salmonisexon
EMLSAE00000004496EMLSAE00000004496-713424Lepeophtheirus salmonisexon
EMLSAE00000004497EMLSAE00000004497-713425Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779333auto779333Lepeophtheirus salmonispolypeptide
EMLSAP00000001013EMLSAP00000001013Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001013

>EMLSAP00000001013 ID=EMLSAP00000001013|Name=EMLSAP00000001013|organism=Lepeophtheirus salmonis|type=polypeptide|length=278bp
MVKETRFYDILGVSPTANQNDLKKAYRKLALKYHPDRNPSAGDKFKEISM
AYEVLSNQEKRNLYDKAGEKGIKEGGGGEGFHSARDVNRERKFIEVQVDK
GMKDAQKIVFSGEGDQDPDLEAGDIIIVLQESEHPVFARDGINLIMKMKI
NITEALCGLKRTVTTLDDRVLVIQITPGEVIDNEDIKCVYGEGMPTYKDP
FTKGNLIIQFIVTLPKTYPTQNIPQLEKLLPQREPLTIPEEHEEVELNEY
DPSHERRQAQQQMHDEDDDRQPMTCATQ
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mRNA from alignment at LSalAtl2s116:686034..688893+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001013-696860 ID=EMLSAT00000001013-696860|Name=EMLSAT00000001013|organism=Lepeophtheirus salmonis|type=mRNA|length=2860bp|location=Sequence derived from alignment at LSalAtl2s116:686034..688893+ (Lepeophtheirus salmonis)
ATGGTGAAAGAGACGCGTTTCTACGATATTTTAGGAGTAAGTCCAACAGC
GAACCAAAATGATTTGAAGAAGGCGTACCGCAAACTGGCCCTCAAATACC
ACCCCGACCGGAATCCTAGCGCTGGCGATAAATTCAAGGAGATTTCTATG
GCCTACGAAGTGTTGTCCAACCAGGAGAAGCGTAATCTCTACGACAAGGC
TGGAGAGAAGGGCATCAAGGAAGGAGGGGGCGGAGAGGGATTCCACTCTG
CACGAGACGTGTTCGATCTCTTTTTCGGTGCTTCTCGGATGCCGACGGAG
AGGAGAGGGAAGAGCATGGTGCACCAAATCTCAGTCACGCTCCAGGAAAT
GTACAATGGAACCACTCGCAAACTCGCCATTCAGAAAAATGTCATCTGCA
GTGTCTGCAACGGGATCGGTGGAAAAGAGGGCGCCATCAAGTCCTGCTAC
GACTGTCACGAAACTGGGACACAGGTTCGCGTCCAGCAACTCGGCCCTGG
AATGATGCAGCAAATACAAGTGGCTTGTCCATCATGTCAGGGCAGAGGAA
GGATCATTGATCAAAAACTCAAATGCAAGMCCTGCAACGGGAGACGAGTA
AGTCGAGTCGAGTCCAGCCTAGTCCAGTCCAATCCAATCTCATTTCTTAT
TTTCATCACTAGGTTAACAGAGAAAGAAAGTTCATCGAAGTACAAGTGGA
CAAGGGAATGAAGGATGCACAAAAAATTGTTTTTAGCGGTGAAGGAGATC
AAGACCCGGATCTAGAGGCAGGRGATATCATCATTGTTCTACAAGAGTCT
GAGCATCCCGTTTTTGCAAGAGATGGAATTAACTTAATTATGAAAATGAA
AATCAATATTACAGAGGCACTTTGCGGACTTAAAAGAACTGTGACAACTC
TAGATGATCGTGTACTTGTCATTCAAATAACTCCAGGTAAATACTTTTGA
AGAAAAACACTGTAATTCATTTATTTTTACATGTATAAACGATCCTTTAG
GTGAAGTTATAGATAACGAGGATATTAAGTGCGTCTATGGTGAAGGTATG
CCAACCTATAAGGATCCATTTACAAAAGGAAATCTGATCATACAGTTTAT
TGTTACATTACCAAAAACGTATCCTACTCAAAATATACCTCAACTCGAAA
AATTACTCCCTCAAAGGTACGGATCATGTTATTCATATATTATTATCTTC
TTTCTTTCTTCCATTCATTCATTATATTAAAATATCTTGAATATGTAATC
AAGGTTTTCAAGTGAAGTACCTTACCACCACCTTTGCTTGTGTTATAACT
TAGATTGATTTATGCCAAGTTGTCATAGCTTTGATTATTTATATTAAATA
ATTGTGAATATTTTGTCTATTTTAACCCAATTGACGTCGATAAGTATTTT
TTAAAGATTTTTGAATGCAATTTTTCAATTTAGCTAATATGGATATAGAT
CAGAGATACTAATATTTTCTCTCGAAAAAGGACGTATTTTGGCCAAGAAA
AAGCCTGAATACATTTTATACATATTTTCAATAATCTTGGATTACTCAAT
ATAAATTATTCAGCCTTAGGAACAAAATATTAAAGTACTACAACATATAA
GTATAACAAATTCATTCCAGTTAATTTGGTAAAGATTTGTTAATAATTTT
TCATACAGTCTAGAAAAGGGATCGGCAACCTTTTACACGTTTATCACGGA
AAAGGAAACACTGAGAGTCATAAATACTTTTTGGGATCGAAAATAAAGCC
TAACACTTTATTTTGTTTTTATTTTTTCTTTTGAACTTTTCGATTTACTC
TTAAAACTCAAAAAGAACTAATAAAAAACACTAAGTTAAAATTANTGTTT
CAAATAATTAAAAAGTTGCACTTAAATTCTATTTATAGATGTAGCAAAAA
AAAGAAGCTTCTAGCTGTCATCTTCATCAAAGAAATCATCCTTTGTGCGT
TTTGAGACGTAATCGGAGCATTGACCTCCATTTAAAAACAATAATTCACT
GTTCTAAAATTTTAAAGTTTGCTGAACCCCACTCCAGAGTCGCAGCATCA
GGATAAAATAGCTGTGAGCAGCTGATCACTGGTCTAGATTAAGGAATCCG
ATATTTTACGGAAAAAAAAAAAAAAGATTGAGTAGAAAAAAATTGATATT
AACTACAGTATAGACTAATATTATTATATTCTGGTAGTTTATTCCTCTTT
AAGATATATAATACGGTAGTACATCATACTGTCAAATTAAGAAGAATAAT
TTAATTTTCCATTGATTAAAGTGTATCGAGAATTTCCATATTGATATGAT
CCCCATTAGCGTTAATGGGTTAACATTTAAAAATAAATCTAACCTCATAA
TTATTTTTTGTCAAAGAGTTTCAATTTCTTTGTTTTAAATTGAGTCTCAA
TCTTTTTCTCTTATGCCTTTTTTTTTTAATTTTCAGAGAGCCTCTAACGA
TCCCAGAAGAGCATGAAGAAGTTGAACTCAATGAATACGATCCATCACAT
GAAAGACGTCAAGCTCAGCAACAAATGCATGATGAAGATGACGATAGGCA
GCCCATGACGTGTGCAACTCAATAAGACTTCAATAGCCCACGACATGAAT
CATGTTTTATAAATAAATATATACACTTATATTTAGACGTTCCAATTTTC
AATGAAACCATGTATTTCTAAATGATAAAATTTTAAAAAAACGTTAATTT
CTGGTATTCTTTCTTTTTCTTTTGATTTCGGGTCGACCTAATTAGTATTT
ACATATTTCATGAATAATAATTTTTCTTATAATTGTTAAAAATTTTATAG
ACTCGTGGTTGGCTTTGATGTAAGAGAAATCAATAATAAAAAGCTTTATA
TACTTAAATA
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