EMLSAT00000001034, EMLSAT00000001034-696881 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000001034
Unique Name	EMLSAT00000001034-696881
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1171	supercontig	LSalAtl2s1171:182736..187083 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000001034 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000001034	EMLSAG00000001034-683800	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000004591	EMLSAE00000004591-713519	Lepeophtheirus salmonis	exon
EMLSAE00000004592	EMLSAE00000004592-713520	Lepeophtheirus salmonis	exon
EMLSAE00000004593	EMLSAE00000004593-713521	Lepeophtheirus salmonis	exon
EMLSAE00000004594	EMLSAE00000004594-713522	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto774060	auto774060	Lepeophtheirus salmonis	polypeptide
EMLSAP00000001034	EMLSAP00000001034	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1171:182736..187083+

protein sequence of EMLSAP00000001034

>EMLSAP00000001034 ID=EMLSAP00000001034|Name=EMLSAP00000001034|organism=Lepeophtheirus salmonis|type=polypeptide|length=555bp
MIQGFPTLILFKKGEKVEQYDGQRTTKDIVEYMKKQSDPNYKPPPSVVVV
LTTDNFTKYIKNEKLTLAMFYAPWCKHCKQVEPEIEGAAAELKEWGIKIV
KVDGTREKELADQYGIIGWPTFKMFRKGRIYNYDGPREKDNIIAFMKNQY
KPPSEEKSSRLGVVNNMDRLEATVVGFFKGSASEHTDLFDEYIVAANEMR
GSLKFLHTFSDEVAKSYKFPQETIVVFQPEIFWSPYENKTYSISKKSATY
KEILQFIRKSSIPLVGQRTKSNMFKYTERPLVVVYYDVNYDHQYVKDTQF
IRKKVLEVAKEYRTSNLHFAISNEDEFADEIKGLGLEDGGEDVSIGCYSE
KQKFRYQLDGDFESEYLSNFINLLRSGRVSPYMKSLPVPQGEQGLVKNLV
ANNYDDEIHKIKKDAVIFFHAPWCGHCKDLDPVFKKVAKKISTNNENVIF
GKMNGESNDIPYMFPKLKGFPSLFFISAYDKFDPILYQGDKNYKSIRDWI
NRHSSIFLTEEERTGEAALEDDEIESYTNENFEDDLTKPHVESVEDNGIE
SKDEL

mRNA from alignment at LSalAtl2s1171:182736..187083+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000001034-696881 ID=EMLSAT00000001034-696881|Name=EMLSAT00000001034|organism=Lepeophtheirus salmonis|type=mRNA|length=4348bp|location=Sequence derived from alignment at LSalAtl2s1171:182736..187083+ (Lepeophtheirus salmonis)
ATTCATTTCATTGTAGATTTTTTCCCCCTAAAAATGCCTTGTCATTAGGT
TTATGAAAACGTATTTCGGGAAATGCAGACTCAGAATAATATACTTTCTT
TTGAACGAAAAACACGTTTGGCTAGGAACTCTTACTTCAATTAATTTTTM
CCTAGTACTACAACTACTACCGTATCAGAGAGGATACTATCACTGCTAAG
TTGAATTGTCACAATTGTATTGGTCCAAGTAGACTTACTCACAAGGAAGA
GTGGCAAAGATTCATTGGCCCAGTTATTGGAGGCTTCTTATGTGATACTC
GCACTCCGTTAAAGGAAGAAAAAAACGGAGTGTAAAGAAGTTTCTAATTC
ATTTTACAAAGCAGGTTTTACTTAACATCCAATGTTAAACTCAGGATCTA
TAGTTTATTTTCTGATTAGGAACCATGAAGGCAAAAAGTCTTCTTCAATT
AATCTTCTTTACGTCAATATCCTCTTCTGTTCTTGCTGGGGGTGATGATG
GTCCAGGAGATCCAGATTTTAGTGCAAATGACGGAGATCTTGAGAGTGAT
GTCAATCCCATGGAAGTGCCAAAAGGGAACTATAACATCTTGGAAATTGA
TGGTGTAAAAGTATTGAACCGTGATACATTTGCTCATTTCATTAAGCCAA
AGGATATTGTACTGGTTGAGTTCTACGCTCCTTGGTGTGGACACTGTAAA
ACTTTAGAACCAGGTGATTATCATATTTTAAAAATAATTCAAAACACTTC
ACTATTGCAAAACTCAAAGAAAGTCATTATTTTCTAAATTTGAGAAAATA
TATTTTGCTATGTTCATTCACATCATTTAATTATATACATCTGTTTTCAT
TTATGCATATAAATCATCATTTAAATGAAGTGCTAAAGGTAACAAACAGG
AATTTTCCTCAACAGGTAGAAAATTCCGTACTGTTATGTTTTTGAATAGT
ATAAACATGATGACAAACTAATTTACCTGATGAGTACAAAATAAAATTTA
TACATAATTTTTAGAGTATGCCAAGGCCGCACAAATCTTACAAAAGGATG
GCATCCCATTGGCTAAAGTTGATGCTACCAAAGAGGCCTCATTAGCAAAA
GAANTACATGATTCAAGGATTCCCTACTCTGATTTTATTCAAGAAGGGAG
AAAAAGTGGAGCAGTATGATGGACAAAGAACCACTAAGGATATCGTTGAA
TATATGAAAAAACAAAGTGATCCAAATTATAAGCCACCTCCTTCAGTAGT
CGTTGTTCTAACGACTGATAACTTTACTAAATATATCAAAAATGAAAAAC
TTACATTGGCTATGTTCTATGCTCCTTGGTGTAAACACTGTAAGCAAGTC
GAACCCGGTAATACACATTGACTTTTCCATTATATCCTTGTTAAGTTATC
ATGAATAAGGCTTAATTATATTACAACTCTTTTACAGAAATCGAAGGAGC
TGCTGCGGAGCTCAAGGAATGGGGAATCAAAATTGTCAAAGTGGATGGMA
CAAGAGAAAAAGAACTTGCGGATCAATATGGAATCATAGGATGGCCTACT
TTCAAGATGTTCAGAAAAGGACGTATCTACAACTATGACGGACCCCGTGA
GAAGGATAATATCATTGCATTTATGAAAAATCAATATAAGCCCCCCTCTG
AAGAAAAGTCTTCTCGTCTGGGTGTGGTGAATAACATGGATCGACTTGAA
GCTACTGTTGTTGGATTTTTCAAAGGGAGTGCCTCTGAACACACGGATTT
ATTTGATGAGTATATTGTTGCTGCAAACGAAATGAGAGGTTCCCTCAAGT
TCCTTCATACCTTTTCTGATGAAGTTGCTAAAAGCTATAAGTTCCCTCAA
GAAACAATTGTGGTATTCCAACCCGAAATATTTTGGTCTCCTTACGAAAA
TAAGACTTACTCAATATCGAAGAAATCCGCTACGTATAAAGAAATTTTAC
AATTTATCAGAAAATCTTCAATCCCTCTTGTGGGACAACGCACCAAGTCT
AACATGTTTAAATATACCGAAAGACCCCTTGTTGTCGTCTATTATGATGT
AAACTATGATCATCAATACGTCAAAGATACCCAATTCATTAGGAAAAAAG
TCTTGGAGGTTGCAAAAGAGTACCGTACATCCAATTTACACTTTGCTATT
TCTAATGAAGATGAATTTGCTGATGAAATCAAGGGACTTGGACTAGAAGA
TGGTGGTGAAGATGTGAGCATTGGATGCTACAGCGAAAAACAAAAGTTTA
GATATCAGTTGGATGGAGATTTTGAATCGGAGTATTTATCCAATTTTATC
AACTTGCTCAGAAGTGGTAGAGTTAGTCCTTACATGAAATCTCTTCCTGT
TCCACAAGGAGAACAAGGTTTAGTTAAGAACTTAGTAGCAAACAATTATG
ATGACGAAATCCACAAAATCAAGAAAGACGCCGTCATCTTTTTTCATGCT
CCTTGGTGTGGTCATTGCAAGGATTTGGATCCTGTTTTCAAAAAAGTAGC
CAAAAAGATCTCCACTAATAACGAAAATGTTATTTTTGGGAAGATGAATG
GAGAATCAAATGATATTCCGTATATGTTTCCCAAACTCAAGGGTTTCCCC
AGCTTGTTCTTTATCTCTGCATATGATAAATTCGATCCCATTCTTTACCA
AGGCGATAAAAACTACAAATCAATTAGAGACTGGATCAATAGACACTCGT
CCATTTTCTTAACTGAAGAGGAAAGAACTGGCGAGGCCGCACTTGAGGAT
GACGAAATCGAATCCTACACCAACGAAAATTTTGAGGATGATTTAACTAA
GCCCCATGTTGAATCCGTAGAAGATAACGGAATAGAATCTAAAGATGAAC
TATAAAACCCCCTTTCGCTTCAAGAATTTACTCCTTGTCCAGTTTATATA
TAGGAAAAAGTGATACTCATTACAGATAATTTGCAGATGTTTATGTATAG
TTTTAATCCTACGTTCCACAAAATGAGATAAATAGGTTAGGAAATGTAAA
ATATGTTTGATCATTTCAATACTTCTTAGGTAGGGCTCAAATCCACACAG
CTCCTCGTTCTGTTTTCTCTCTGTACATTGAATTATCTCACTACCGCCTA
CATAAATTTCTATTTTTTATTAAACATAATCGTTAAATTTCCATACCACC
TATACCATGATCAACCAAATAATAGTCTATATTAAAATTCCTAGAGTGAT
GCATTTTATTCAATTAGTTACCGTACATAATAAAATACTTTATTTATAGC
ATATTACATAAGAAACATACACTGGACACGAATCCTAATAATTTCGTCCG
AATTAAATACAGATCTCCAATCCCTTACTAGATAATTTTCTAAATTTTGG
ATACCATCTTAATTTTAGTTCAACTTCTGCCATTGTACCTCACCTCAGTA
GGTCGCGACAAACCCTAAAAAAAAAATAGAGTAAGTTAGTTATTCAGAAA
ACTAAAATTCATGAAAAATTTTAAAAGTTGCTTTTAAGTTCAGATATAAT
TAACGATTTCCCCACGAATATGAATGAATTAACCACAATTCTGTAGGACA
GGGATAACAAATAGTCTCATCATGCATCCTAAGGCCCCTTTCATAATAAT
ATTGACGGAACTTACCCGTGAATTCTAGAGGAAGTGAAGAGGTTGCGTGA
TACAATTTCATCAAGACGCGAGCTCATCCCACGTGGTCTCTAAATAATAA
AGGAATAAACATTATAGCAACTCTTGTACTCACTAATTACCATTTGTTAT
AATTAATTCATGAATGTACAATAGCTTCTTGTGACCGACCTACATAGACT
ATAGGAATCACAATGGGTGCTACTGACTTACTCTTTCTCTTCATTCCGTC
CTGAAAGATCTGGAATGGATCATTCCCGGTGCGATTCATAGAAGAGAGTA
TCGTATATATACAAGAGGTATGAAAGTTACTTACCAGAGTCTTAATCATT
GTCCATCATGAAAATGTATTCAGTTTCCATAATTCAATCAACCATTCCCA
CAAATTTTTCTACGTCCATTGCTGTTAAGACTGTTGGAACGATTGATATT
TATATACTGCGCGTGGGTAAAAGAAAACAGCAGAGAAGCGGAAGCTATAC
GTATGGCTAKCAACTGCAATTTACTACTCATTTGTAACTATAATATTTTT
TTACCCACGTTGATGTTAGCTATTTTAACGTTTTATTATTGAAAGGAATT
TATCCTTTATCTTACATTTACATTACTACATATACGTACCCCAGTTTACA
GATGTGAGGTTATACATCTAGGAATCAACATATCTATCATTCATTAGTTT
TTGTCATTGATCAAATATAAAATGCATTTACTATGCAACTTTAAGCGT

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