EMLSAT00000001038, EMLSAT00000001038-696885 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001038
Unique NameEMLSAT00000001038-696885
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1171supercontigLSalAtl2s1171:96448..97434 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001038 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001038EMLSAG00000001038-683804Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004605EMLSAE00000004605-713533Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772047auto772047Lepeophtheirus salmonispolypeptide
EMLSAP00000001038EMLSAP00000001038Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001038

>EMLSAP00000001038 ID=EMLSAP00000001038|Name=EMLSAP00000001038|organism=Lepeophtheirus salmonis|type=polypeptide|length=328bp
MLINPLSMSGFNPIIVPGLMVLIGGLINMSLHRIEEGHIGVYFRGGALLQ
KTANPGFHMMVPLITSFKSIQITLQTDEIKNVPCGTSGGVMIYFDRIEVV
NILENEAVYDMVRKFTVDYDKPLIFDKVHHELNQFCSVHNLHEVYIDLFD
QIDENLKNAIQKELSDMAPGLRVLSVRVTKPKIPEAIRKNYELMESEKTK
LLISVQRQKVXEKEAETDRKKAVIEAEKESIVAKIKLEKQILEKESEQKM
AHIQDSMHLAKEKFKADAEFYKIHKEAESNKLLLTKEFLELKRYEAISNN
QKMYFGPDVPNMFFINDEFTKKDRQTVT
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mRNA from alignment at LSalAtl2s1171:96448..97434-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001038-696885 ID=EMLSAT00000001038-696885|Name=EMLSAT00000001038|organism=Lepeophtheirus salmonis|type=mRNA|length=987bp|location=Sequence derived from alignment at LSalAtl2s1171:96448..97434- (Lepeophtheirus salmonis)
ATGCTCATCAATCCCTTATCGATGTCCGGATTTAATCCCATCATAGTACC
CGGCCTCATGGTCCTCATTGGAGGACTCATTAACATGAGTCTTCATCGTA
TAGAGGAGGGTCATATCGGAGTATATTTTCGTGGTGGAGCTCTTCTTCAA
AAAACGGCGAACCCTGGATTTCACATGATGGTCCCTCTCATCACGTCCTT
CAAGTCCATTCAAATCACTTTACAAACGGATGAAATTAAAAACGTTCCTT
GTGGTACTTCAGGTGGGGTTATGATCTATTTTGATCGTATTGAAGTGGTC
AACATTCTAGAAAACGAGGCGGTCTATGATATGGTGAGGAAATTTACGGT
GGACTACGACAAACCCCTCATCTTTGACAAGGTTCACCATGAACTCAATC
AGTTCTGCTCCGTTCATAATTTACATGAGGTCTATATCGATCTCTTTGAT
CAAATTGATGAAAATTTGAAGAACGCAATTCAAAAGGAACTGAGTGACAT
GGCTCCTGGTTTGAGGGTTTTGTCAGTTCGAGTCACTAAGCCTAAGATTC
CAGAAGCGATTAGAAAAAACTATGAGTTAATGGAGTCCGAGAAGACCAAG
TTGCTTATATCTGTACAAAGACAGAAGGTTGWAGAAAAGGAGGCAGAAAC
CGATAGGAAAAAAGCTGTTATTGAAGCTGAAAAAGAATCCATTGTAGCCA
AGATTAAACTCGAGAAACAAATCTTAGAGAAGGAGTCTGAGCAAAAGATG
GCTCATATTCAAGATTCTATGCATTTAGCTAAGGAAAAATTTAAAGCAGA
TGCTGAGTTCTATAAAATCCATAAAGAAGCCGAATCCAATAAACTTTTAT
TAACAAAAGAGTTTCTCGAATTAAAACGATACGAAGCCATCTCCAACAAC
CAGAAAATGTACTTTGGGCCTGATGTACCTAACATGTTTTTCATAAATGA
TGAATTCACCAAAAAGGATCGTCAAACTGTTACATGA
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