EMLSAT00000001043, EMLSAT00000001043-696890 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001043
Unique NameEMLSAT00000001043-696890
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1172supercontigLSalAtl2s1172:27530..28995 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001043 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001043EMLSAG00000001043-683809Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004616EMLSAE00000004616-713544Lepeophtheirus salmonisexon
EMLSAE00000004617EMLSAE00000004617-713545Lepeophtheirus salmonisexon
EMLSAE00000004618EMLSAE00000004618-713546Lepeophtheirus salmonisexon
EMLSAE00000004619EMLSAE00000004619-713547Lepeophtheirus salmonisexon
EMLSAE00000004620EMLSAE00000004620-713548Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769783auto769783Lepeophtheirus salmonispolypeptide
EMLSAP00000001043EMLSAP00000001043Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001043

>EMLSAP00000001043 ID=EMLSAP00000001043|Name=EMLSAP00000001043|organism=Lepeophtheirus salmonis|type=polypeptide|length=407bp
MSVSMIFMLKNIVTKSKRSFFTSINTLTKLELSKRNILVDERVSIRVLDV
DLSHLIIRTKLINEEQRLFYESVNQFKVGDSQILDLDESVPSKGYSIPDS
MGIFWSMKKIEDKGGYDFLMPSDVTKPLNFDITVEDFGGKVLCSESISRH
YMSSGVKRIKLNHGRTRGTLFIPAXQPGDKFPAIINLYGGIHNKNVIEED
SSMLASRGIVTLSLGYFGVDDLPRSYKTLEAEYFEEAIDYLLTRDDVMKH
KGIGLLGLSKGGDIVQTLACLRPDVIGAICIQNGACVSILTSLTKNGVSM
GELAQLNYDNVKLRSDDSMDISKVVLVPHLDSKLNIPIENFPGNVLWIAG
EDDKNFLSVDFAKNAETRAKESGKNNFELVVYPGMGHFVRLPFTPLTKYT
AHPLLPK
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mRNA from alignment at LSalAtl2s1172:27530..28995-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001043-696890 ID=EMLSAT00000001043-696890|Name=EMLSAT00000001043|organism=Lepeophtheirus salmonis|type=mRNA|length=1466bp|location=Sequence derived from alignment at LSalAtl2s1172:27530..28995- (Lepeophtheirus salmonis)
ATGTCTGTGTCGATGATTTTTATGCTGAAAAATATTGTAACTAAAAGTAA ACGGTCTTTTTTTACATCCATAAATACATTGACAAAGTTGGAACTTAGTA AGAGGTATAAATGTACATAAATATTTTATTCTTAAAATGATTGTAATTAT TGTATCATCATCAAAGAAATATTTTAGTAGATGAAAGAGTTTCCATTCGG GTCCTGGATGTAGATCTTTCCCATCTCATTATTCGAACAAAGCTAATCAA CGAGGAACAAAGGTTATTTTATGAGTCAGTCAATCAGTTTAAGGTGGGAG ATTCTCAGATTTTGGATTTGGATGAGTCTGTTCCTTCTAAGGGTTATTCC ATTCCTGATTCTATGGGTATATTTTGGTCGATGAAAAAGATTGAAGATAA AGGTGGCTATGATTTTCTTATGCCCTCTGATGTAACTAAGCCTTTAAATT TTGATATTACTGTTGAGGATTTCGGTGGGTGAGTGAGAGTGTTCTTTTTT TTTTTAAGAATTTGAGTTTATTGTTTATGAGACATGATTGAATTGTTTTA GTAAGGTCTTGTGTTCTGAGAGTATATCAAGACACTATATGTCTTCAGGA GTGAAAAGAATTAAACTTAATCACGGAAGGACAAGGGGCACCCTTTTCAT ACCGGCTTYGCAGCCAGGAGATAAATTCCCTGCTATAATTAATCTATATG GAGGAATCCATAATAAAAATGTGATTGAAGAAGACTCATCCATGTTGGCC TCTCGGTTTGTATAACATATTTGCAAAAATATTTCAATGTTTGGTTATAA ATAAGTCTTTATTAGAGGAATCGTTACGCTATCTTTAGGGTACTTTGGAG TTGATGACTTGCCTAGAAGTTATAAAACACTTGAGGCAGAATATTTTGAA GAAGCGATTGACTATTTATTGACTAGAGATGACGTTATGAAGCACAAGGG TATTGGGTTACTCGGATTATCTAAAGGTGGAGACATTGTTCAAACGTTAG CATGTCTTAGGCCAGATGTAATTGGAGCCATTTGTATTCAAAACGGAGCT TGCGTTTCAATTTTAACGTCCTTGACAAAAAACGGAGTTTCTATGGGAGA ATTGGCTCAGTTAAATTATGATAATGTCAAGTTAAGGTCAGATGACTCCA TGGATATTTCCAAAGTTGTTTTAGTGCCTCATCTAGATTCTAAATTAGTA ATTAATAATTGTATAATAATATAAATTATATTTTCATTCATTCATAGAAC ATTCCAATCGAAAACTTCCCTGGGAACGTGCTTTGGATTGCTGGAGAGGA TGATAAAAATTTTTTGAGTGTTGATTTTGCTAAAAATGCTGAGACGAGAG CAAAAGAAAGTGGGAAAAATAATTTTGAGCTCGTAGTATATCCAGGCATG GGCCATTTTGTTCGTTTACCATTTACACCATTAACAAAATATACTGCACA TCCCCTACTTCCAAAA
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