EMLSAT00000001048, EMLSAT00000001048-696895 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001048
Unique NameEMLSAT00000001048-696895
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1172supercontigLSalAtl2s1172:43015..43503 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001048 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001048EMLSAG00000001048-683814Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004635EMLSAE00000004635-713563Lepeophtheirus salmonisexon
EMLSAE00000004636EMLSAE00000004636-713564Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770407auto770407Lepeophtheirus salmonispolypeptide
EMLSAP00000001048EMLSAP00000001048Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001048

>EMLSAP00000001048 ID=EMLSAP00000001048|Name=EMLSAP00000001048|organism=Lepeophtheirus salmonis|type=polypeptide|length=122bp
MYALARLATSNVSRSTLSGVRCQYALARQNAWTPIAARAIQTSSVKSDID
SAAKFIGAGAATVGVAGSGAGIGSVFGSLVIGYARNPSLKQQLFSYAILG
FALSEAMGLFCLMMAFLLLFAF
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mRNA from alignment at LSalAtl2s1172:43015..43503-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001048-696895 ID=EMLSAT00000001048-696895|Name=EMLSAT00000001048|organism=Lepeophtheirus salmonis|type=mRNA|length=489bp|location=Sequence derived from alignment at LSalAtl2s1172:43015..43503- (Lepeophtheirus salmonis)
ATGTATGCTCTTGCTCGTTTAGCCACCTCCAATGTATCTCGCAGCACCCT
TTCCGGTGTTAGATGTCAATATGCCTTGGCAAGACAAGTAAGTATCTTTT
TAATTTAACTAAGACAAGTGAGAAGGTTCCCTATTGATTAATTTCAAGAT
GGCGACGTGTCTTTCAGTCACAATAAAACTCATTTTTATTTTATTCGTCT
TTTTCAGAACGCATGGACTCCCATCGCTGCCAGAGCTATTCAAACTTCCT
CTGTAAAGAGTGACATTGACAGTGCTGCCAAGTTCATTGGTGCTGGAGCT
GCCACTGTCGGAGTCGCAGGATCTGGAGCTGGTATTGGATCTGTTTTCGG
CTCTTTGGTCATCGGCTATGCCCGTAATCCATCTCTCAAACAACAACTTT
TCTCCTACGCCATTCTTGGATTCGCTCTCTCTGAGGCTATGGGTCTTTTC
TGTTTGATGATGGCCTTTTTACTTCTCTTCGCATTCTAA
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