EMLSAT00000001070, EMLSAT00000001070-696917 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001070
Unique NameEMLSAT00000001070-696917
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s117supercontigLSalAtl2s117:1128842..1130225 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001070 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001070EMLSAG00000001070-683836Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004711EMLSAE00000004711-713639Lepeophtheirus salmonisexon
EMLSAE00000004712EMLSAE00000004712-713640Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780452auto780452Lepeophtheirus salmonispolypeptide
EMLSAP00000001070EMLSAP00000001070Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001070

>EMLSAP00000001070 ID=EMLSAP00000001070|Name=EMLSAP00000001070|organism=Lepeophtheirus salmonis|type=polypeptide|length=305bp
MANIWNQIGVLDRIYIYPLKSGKGLPVQKAKVDKYGLTHQENEDRRFVLV
DSVHDFKVMTGRRYHGLVKVELSKSNSNTFTLKAPGVEPFTGVLPSSSSL
PIETNIFGNTCRGYDCGDAASLWFGKYLQLENLSRCRLLYHCDEKSSRSL
IDSKQLMTSLSMVEDVPFYADGYPILLTTSRSVKYLNEVLKNQEEQDLIV
DDKRFRTNIHIQNNIPFDEDNWTRIRIGSEAFFRNDGPCRRCNFTTIDPV
HGLKNEKNQPLKTLSTFRLKRELGGNSLCFGINLGVDTPGSLIKIGDPVF
VTYVQ
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mRNA from alignment at LSalAtl2s117:1128842..1130225+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001070-696917 ID=EMLSAT00000001070-696917|Name=EMLSAT00000001070|organism=Lepeophtheirus salmonis|type=mRNA|length=1384bp|location=Sequence derived from alignment at LSalAtl2s117:1128842..1130225+ (Lepeophtheirus salmonis)
TATCTCAAGTCCTCAATTTATTATAATATTGTATTGATAATGATTTTGCA
GTTCATATTACATCTAAATATGTACTAGACATAAATCTATATGATTTTGT
TGTTTACAACTTGTACTATGTTAATAAAGTGGTTCCAGTTTTCAGTAACA
TGATGTTTGGGAACAAAAAAACAACTATAAACAATTGATTTTTCTATCAT
CGAAACAAATAAGAGCATTGAAAAGGGATGGCAAATATTTGGAATCAGAT
CGGAGTCCTTGATAGAATATACATCTATCCTCTCAAGTCCGGAAAAGGGC
TTCCAGTACAAAAAGCCAAGGTATCTAAATAAAAATAATTTAAATACGTA
GAAAACCACGACTTATTTCATATCTCTTGCATATTTTCTTTATTTCCAGG
TGGATAAATATGGTCTCACACATCAAGAAAATGAAGATAGAAGGTTTGTC
TTGGTTGATTCAGTGCATGACTTTAAGGTAATGACAGGGAGAAGATACCA
TGGATTGGTAAAAGTGGAACTCTCCAAGAGCAACTCGAATACTTTTACAC
TTAAGGCTCCAGGAGTGGAACCCTTTACCGGAGTTCTTCCCTCATCTTCA
TCCTTACCTATAGAAACAAATATTTTTGGGAATACATGCCGGGGATACGA
CTGCGGAGACGCTGCTTCCCTCTGGTTTGGAAAGTATCTTCAACTTGAGA
ACTTAAGCCGATGTCGTCTTCTTTATCATTGTGACGAAAAGAGTTCTCGA
TCCCTCATTGATTCAAAACAATTAATGACGTCACTAAGCATGGTGGAAGA
CGTTCCTTTCTATGCAGATGGTTATCCCATTCTATTAACGACATCCAGGA
GTGTTAAGTACCTCAATGAAGTTTTAAAAAATCAAGAAGAACAAGATTTG
ATCGTGGATGACAAAAGATTCAGAACCAATATTCATATACAAAATAATAT
TCCTTTCGATGAAGACAATTGGACCAGGATCCGTATTGGAAGTGAGGCTT
TTTTCCGAAATGATGGACCATGTAGAAGATGCAACTTTACGACAATTGAT
CCAGTTCATGGCCTGAAAAATGAAAAGAATCAACCTTTGAAGACCCTTTC
AACCTTTCGATTAAAACGCGAATTGGGAGGAAACTCTCTTTGCTTTGGAA
TCAATCTTGGAGTTGACACACCTGGCTCTCTTATAAAAATTGGAGATCCT
GTTTTTGTTACATATGTACAATAAATGAAATATACTTTCAATCAATCAGT
AATATCGTTATGTACACTATTAAAATTATTCATTAATTTTGCAAAGTATG
TATGGATATTATAGAGCAAAACGGGACGTTTGTGGAAAGGTGAATTCAGG
AAGAATCCGCGTTTATACTGTTATTCTATGTATG
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