EMLSAT00000001071, EMLSAT00000001071-696918 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001071
Unique NameEMLSAT00000001071-696918
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s117supercontigLSalAtl2s117:1168174..1169631 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001071 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001071EMLSAG00000001071-683837Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004713EMLSAE00000004713-713641Lepeophtheirus salmonisexon
EMLSAE00000004714EMLSAE00000004714-713642Lepeophtheirus salmonisexon
EMLSAE00000004715EMLSAE00000004715-713643Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780490auto780490Lepeophtheirus salmonispolypeptide
EMLSAP00000001071EMLSAP00000001071Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001071

>EMLSAP00000001071 ID=EMLSAP00000001071|Name=EMLSAP00000001071|organism=Lepeophtheirus salmonis|type=polypeptide|length=145bp
MSMFSGLTNQISGWVANKQGKNEGEAPVPPENGGGEDPLAQQQQQAGAMG
EAGVEGGEAPNAAGRVTGMAQGFLSKAMAAKDGMKEKVGGFQPPNLHGLG
NNIMSGXTNLIPGRKEEEVPTPPEPNPPTDMGGEMMEGGEEIVQE
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mRNA from alignment at LSalAtl2s117:1168174..1169631+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001071-696918 ID=EMLSAT00000001071-696918|Name=EMLSAT00000001071|organism=Lepeophtheirus salmonis|type=mRNA|length=1458bp|location=Sequence derived from alignment at LSalAtl2s117:1168174..1169631+ (Lepeophtheirus salmonis)
CTGTTCTCTTCTTTTCTCCTTCTCACGCACTTTCTTCTTCTCCTTCAAAA
GCCATTCAAGTAAAAGTTTGAAAGAATCAGTCACTCAGTGAAATTTTCTT
GTTTTTATCTAGTGGTCTTCTGCTTCTTCCATTCCTTCTGAATAGTTATT
TATCTCCAACAAAGAATTCTTCTCCTGATTTGAGTGAGTGGTACTGCTTA
TTTCGGCATACATACATAAATATAATCCCCTTAGAGAAGAGGCTGTTTCC
CTACGGCTCCGTACTGTTTTCCTCTCTCMTTATTGTGAGTTTATGTGCGT
TTGTGATTAATTAACTAATCATCATTTCATAGCCATCAACACAACCTCCT
TCCTTAGTCATTCCCTCCCGAACGAAGACCCAATCTTTTTTTAAGACACA
CCAAAAAGTTATTAGAAAATTTTAATTATCCAGGATGTCAATGTTCTCGG
GATTAACCAACCAGATCTCTGGATGGGTCGCAAACAAACAGGGTAAAAAC
GAAGGTGAAGCTCCTGTTCCACCAGAAAATGGAGGTGGTGAAGATCCACT
TGCTCAACAGCAACAACAGGCKGGAGCCATGGGCGAAGCTGGTGTAGAAG
GAGGAGAAGCACCCAACGCGGCAGGKCGAGTGACTGGTATGGCCCAGGGA
TTCCTCTCTAAGGCCATGGCAGCAAAGGACGGAATGAAAGAAAAGGTGGG
TGGCTTTCAACCCCCAAATCTTCATGGTCTAGGAAATAATATTATGTCGG
GAGKGACAAATCTGATTCCGGGACGCAAGGAAGAAGAAGTTCCTACACCT
CCAGAGCCTAATCCTCCAACTGACATGGGAGGCGAGATGATGGAAGGGGG
TGAAGAGATTGTCCAGGAGTAAAGAAAGAGGCATAGAACCCAATCAATTC
CCCCTTACAACTCAACGTATCCTACAACAACCATGAATTAATTAGTACTC
ATTATTTATTCCTTTAATTTTTATTATTAATCATTAAATATTATCAAATA
ACTTTATTGTTTTAAATTTCTGCGACTAATTAAAAAAGAAATCAAATTTA
CGATCTTCATATTAATCAAACATAATTATTAATATTATTATAATTTTTAA
CAAGAAAGTAATTTTTTTTAGTCATAGTGGCTTTTGAACATCACTGTAAA
TAACTAAATTGATAAAATATTATAACATCAATCAGAATTATTAAAAAAAA
AAAAAAGAAGGAACTCGGCACGAATAAAGAGGGAATTTCATATTTTAGTT
CAAATTATATTTAAATATATCCTCTATTATTATACACAATTAACTAACTA
CTAACTAAGAGCCCTCTATCCTCGTGACGCCTATTTAAATATCTAAATAT
TAATCTCTATATATATATAACTTTGTAAAGTTGTTTTTAAGTTTTATTAA
TAATTTTATTAATATCATTATTTGTTGGATTCTGCAATAAAAAAAATGTA
ATGTCGTT
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