EMLSAT00000001076, EMLSAT00000001076-696923 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001076
Unique NameEMLSAT00000001076-696923
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s117supercontigLSalAtl2s117:529442..531034 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001076 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001076EMLSAG00000001076-683842Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004726EMLSAE00000004726-713654Lepeophtheirus salmonisexon
EMLSAE00000004727EMLSAE00000004727-713655Lepeophtheirus salmonisexon
EMLSAE00000004728EMLSAE00000004728-713656Lepeophtheirus salmonisexon
EMLSAE00000004729EMLSAE00000004729-713657Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778405auto778405Lepeophtheirus salmonispolypeptide
EMLSAP00000001076EMLSAP00000001076Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001076

>EMLSAP00000001076 ID=EMLSAP00000001076|Name=EMLSAP00000001076|organism=Lepeophtheirus salmonis|type=polypeptide|length=391bp
MVVLNPTTTSGVTXPPNSSSTTAPSASNSYLSPYLQPLPSDLDPKVSPLA
MLTRACNQIESKLMMDSASKKNGFGXLSLDKSLSPTSSTSSSPKTPPARK
SPFSVESKPVPCGPLSTSSSVSAPLSCPTPPSSKERSSTASPPKSSNRNP
SPFAGRSYMFPYGLPPPPATFSFIRSSXFWRSWYPGAGPPYTCNWMQGTD
FCGRRXNTSDELMTHLRSHTNLGGESSSPPPPQQHFPPVSVPSSSDATLA
ALQAAQLNALTAVSSGGPSSALAALQAQAAQMCQKIAAXSAASLSLNSSY
PAASSNTSSSKTTSIFTSSKASPKMSASSSSSNGSRDNSESLSRYHPYSR
SFAGGSNGNTNNSSPTGGLFFNCTKEKTTPNNSCSNELVIF
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mRNA from alignment at LSalAtl2s117:529442..531034-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001076-696923 ID=EMLSAT00000001076-696923|Name=EMLSAT00000001076|organism=Lepeophtheirus salmonis|type=mRNA|length=1593bp|location=Sequence derived from alignment at LSalAtl2s117:529442..531034- (Lepeophtheirus salmonis)
ATGGTGGTGCTGAATCCTACTACGACTTCAGGAGTGACTKCTCCTCCAAA TTCTAGCTCTACAACGGCTCCATCAGCCTCTAATTCATATCTATCTCCCT ATCTTCAACCTTTGCCTTCTGACGTAAGTTTCTCGAATTATTTTTTGAGC AGTATGTTTGAGGAGTTATTTTTCATTTTTCTTAAACCTATTTCTTTTTT AATATTACAGTTGGACCCCAAAGTAAGTCCCCTAGCAATGCTAACTCGTG CCTGCAATCAAATCGAGTCCAAACTCATGATGGACTCTGCTTCAAAAAAG AATGGCTTCGGGAGMCTATCCTTGGACAAATCCCTTTCTCCGACATCTTC TACATCCTCTTCTCCAAAGACTCCGCCTGCACGGAAATCACCWTTTTCTG TAGAATCCAAGCCAGTACCTTGTGGTCCCCTATCTACCTCTAGCAGTGTT TCTGCTCCATTAAGCTGTCCCACACCTCCTTCATCCAAAGAAAGAAGCTC CACGGCATCTCCTCCTAAATCATCAAATCGTAATCCAAGTCCTTTTGCGG GGGTAGGATCTTTATATTCTGGAGGATTCCCTCCATCTCTCTTTGCTCCK CCTCCATCAAGRCCCMGCKCGGARCCTCTCTGTAGAGATCCATCCTGCCC AACCACAATGTGGAGAAACTCTCAAATCCTTCAGCGTTCTTATATGTTCC CCTATGGTCTCCCTCCACCCCCAGCTACTTTTTCCTTCATTCGCTCCTCC AANTTCTGGAGGAGCTGGTATCCCGGAGCCGGACCTCCATACACATGCAA TTGGATGCAAGGAACTGACTTTTGTGGACGGCGGKTCAATACATCAGACG AGCTCATGACACATTTAAGAAGTCATACCAATCTGGGCGGCGAATCTTCT TCGCCACCCCCACCACAGCAACATTTTCCTCCAGTCTCAGTTCCCAGTAG CTCAGATGCCACTCTTGCAGCTCTTCAAGCTGCACAGTTGAATGCTCTTA CAGCAGTCAGTTCTGGTGGACCCTCAAGTGCTCTAGCTGCTCTTCAAGCT CAAGCTGCTCAAATGTGTCAGAAAATTGCGGCTTYGTCAGCCGCTTCCTT ATCACTAAACTCATCTTATCCTGCAGCATCTTCAAATACATCATCATCAA AAACCACCTCAATCTTCACATCCTCAAAAGCCTCACCAAAGATGAGTGCC TCTTCATCCTCCTCTAACGGGAGTCGGGATAACTCTGAGTCCTTATCGCG CTATCATCCTTATTCAAGATCCTTTGCAGGGGGTTCAAACGGAAATACCA ATAACTCCTCCCCTACAGGTGGTGTGAATTCTGGACCACCATTTCACTTA CCTCTTCCACATCAGCTCATGGGACTTCCACCTTCCTTATATTTGCATTC AYCSCCCTMCGCKGCGGCCGCRGCGATGGCAGSCGCTGCGGCGGCTGGAC TATCACCGTACCCAATTTAAAAGAACACAAAAATCTGCTGCTTCTTTTTG TTTGTTTTGATTCATTATCAGTTATTTTTCAATTGCACAAAAGAAAAAAC TACCCCAAACAACTCTTGTTCGAATGAACTTGTTATCTTCTAA
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