EMLSAT00000001082, EMLSAT00000001082-696929 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001082
Unique NameEMLSAT00000001082-696929
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s117supercontigLSalAtl2s117:716893..721508 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001082 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001082EMLSAG00000001082-683848Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004746EMLSAE00000004746-713674Lepeophtheirus salmonisexon
EMLSAE00000004747EMLSAE00000004747-713675Lepeophtheirus salmonisexon
EMLSAE00000004748EMLSAE00000004748-713676Lepeophtheirus salmonisexon
EMLSAE00000004749EMLSAE00000004749-713677Lepeophtheirus salmonisexon
EMLSAE00000004750EMLSAE00000004750-713678Lepeophtheirus salmonisexon
EMLSAE00000004751EMLSAE00000004751-713679Lepeophtheirus salmonisexon
EMLSAE00000004752EMLSAE00000004752-713680Lepeophtheirus salmonisexon
EMLSAE00000004753EMLSAE00000004753-713681Lepeophtheirus salmonisexon
EMLSAE00000004754EMLSAE00000004754-713682Lepeophtheirus salmonisexon
EMLSAE00000004755EMLSAE00000004755-713683Lepeophtheirus salmonisexon
EMLSAE00000004756EMLSAE00000004756-713684Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779452auto779452Lepeophtheirus salmonispolypeptide
EMLSAP00000001082EMLSAP00000001082Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001082

>EMLSAP00000001082 ID=EMLSAP00000001082|Name=EMLSAP00000001082|organism=Lepeophtheirus salmonis|type=polypeptide|length=737bp
MSLRPRRVDFDTTWSELRETVKGVITLSHVPRDVWNDRFMDVYSLCVAYP
EPLADRLYRETKCFLEEHFYELLLKVLQAGRDELLHNYHEAWKEYLNNQH
IRKQKISDAELTYGSVSINPGEQMKEIGELGLEIWRRKMIEPVQDELVRL
LLDGIQYDRLNENGSTGQIKFQSDAVIKGVINSFVSVEEFKRRGNLELYE
TIFEKPFLAATGEFYKNEASKLLQEGSVSQYMEKVIQKIESENKRSIKFL
YPTSYSKVTNECEQRMVGDHIELLHSECKPMVERELKEDXSNMYRLLKPI
SGAQDVLLEEIQNHIKNQGLKSISNLKGHSIAKDFVENVLEVHHKYKELI
TTVFNGDQPYMGTLDKACXAIINHRQSKQLPKSPELLARYCDGLLKKSQK
GISENEIDDKLNASITVFKYLDDKDVFQKFYARNLGKRLIYQQSHSMDLE
EGMINRLKXACGYEFTNKFHRMFTDISLAEDLNNKFTNYLQKESIELGIN
YFVRVLQQGAWPLSQNGLCPLAIPIELEKTVQMFEQFYTKQFSGRKLTWL
HHLSSGDVKIGYLAKTYIINMSTFQMAILLCFENADSLEYKELLEATKMS
EEQFPRNLQSLLDAKLLDCDTGEIDINSIITLNMNYTNKRTKFRITRTLQ
NETPQEVEHTHQAVEEDRKMYLQATIVRTMKSRKVLKHNLLIQEVLSQSR
GRFAPQVNMIKKCIESLIDKAYIERTPNGNDEYSYMA
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mRNA from alignment at LSalAtl2s117:716893..721508-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001082-696929 ID=EMLSAT00000001082-696929|Name=EMLSAT00000001082|organism=Lepeophtheirus salmonis|type=mRNA|length=4616bp|location=Sequence derived from alignment at LSalAtl2s117:716893..721508- (Lepeophtheirus salmonis)
ATTAAGAAAGAGGATGTCGCTTCGACCTCGTCGCGTGGATTTCGACACAA
CTTGGTCGGAATTACGAGAAACGGTTAAAGGAGTTATCACTCTTAGTCAT
GTTCCTAGAGACGTTTGGAATGATCGATTCATGGGTAGGTTATCGTCATT
TTTATAGAAGTAAATCATTGTACCTGACATAGCAATTATTAATTATATTA
TTTTTAACTTTCCAAGATGTTTACTCCTTATGCGTGGCATATCCTGAACC
CTTGGCAGATCGACTTTATAGAGAAACTAAATGCTTCTTAGAGGAACATT
TCTATGAATTACTCCTTAAAGTTCTCCAGGCGGGTCGAGATGAACTCCTT
CATAACTATCACGAAGCATGGAAAGAGTTTTCTCAAGGAATCGACTATCT
TCATATGCTCTATTCGTAAGATCATTACACTTCAAGGGCTGAGTACCAAA
TTGTCGTAACTCACAAATTACAAAAATTAGTCTTATTGTATATAAGCATT
CATCCTTGAAGTCTTAATATTTAGAAATAGAGGAATTCAGAATGTTTAAA
TTCATTTCTCAGATCCATTTATTTGTACAAATATGAAAAAGCCATTATTC
ATGATGAAAGAATGGACTTTCTAGCCTCCATTCCTGTAAGTATATATAGG
AGTTACGACGATTTGACTCTCACCCCACGATTAGTTTTATTTCCTGACTG
TCATTCTATAAGTATAATATTTAAAAACAGAAATTCCGACTATTTAAATT
CATTTTCCACATCCATTTATTTGTAAAAATATGAAAACGGCATTATTTCT
TTCCAATCTCTATTCTGTATAGATAATATAAGAGTTACGACGATCTGGCT
CTCACTCCACGATTAATCTTATTGTCAATATGTCATTCCAGAAGTGAAGT
TTAATATTTAAAAAATGGAAAAATTCAGACTCTTTAAATTCATTTATCAG
ATCAATTTATTTGTGCAAATATGAAAAAAACCATTATTCATTATGAGGGA
ATAGACTTTCCAATCCCCATTCTGTAAAGTAAATATAGGAGTTACGACAA
TTTGGCTCTCACCCCATGATATTTTGTGCACAGTTCTTTATTTCCTCATT
CCTAAGAAGTACCTCAATATACAAGGAAGGAGGAAATGTCATTGACTCCC
GTTAGTTATGTGTTGACTTGGTTAAATCAATTCTAAAACGTTGGAAAAGT
CAAAACATATACTTCTTAAATACATGGCATTATCTTATTTGTCTTGGGTA
TATAGAATGCCAACACAAAAACAAGCTATAATTATTTATTACAAAATGTA
GACTGGATTATACTTGTATTCTTTTACGAATTATCCTCAATTTCTATTAA
GGATTGTACTCTTAAAGTAAATAAAATTGAGCATCACATAAAATTAAGAG
AAATTGACATATTTTATGCTTTTGAAATGGACCATATCAGGGTCAATATA
AATCTCTTAAATCAAATAAAGGTTCTAAACTATAACTAAATTAGCTTTTT
ATGTGTAAATGAAGTAAAATATATTGAATGTAATATTCTCCTCTTCTTGA
TTTTTGTTCACGATTGTTTTTATGTTAACGTACTACATATTCAGATATAT
TTTCCAGATAAATATAAGAGATAATTTGTATCATCATAGGATAAAAACAC
AGAACTGCTCTTTTTTGACTACTTAGTTTATTAGTCGCCGTTCTCAGAGG
GATAAAAGGACTTTTTGAAGATTAATTATAATTATAATTTTAACTCTAGT
TAAATTTCTCATATTTGTATAATTACAACTTGATGGATTCATTACTTTAC
TAATAGATAGTACTAAGTGTTTTAAATTTACAATACGGAGATAATTCCAA
TAGTTGAAATTCATATCTAAGTATGTACTTACTACTAAATCCAAGTTTTT
TAAACATAAATTTATATTAATCCATATCACGGGTCTGAAATATATATTAA
TATATTTACAGATACTTGAACAATCAACATATTCGTAAGCAAAAAATTTC
TGATGCTGAGCTAACCTATGGTAGTGTATCCATAAATCCTGGAGAGCAAA
TGAAAGAAATTGGRGAGTTAGGTCTCGAAATTTGGAGGAGAAAGATGATT
GAGCCTGTACAGGATGAACTTGTTCGATTGTTGTTGGATGGTATTCAATA
CGATCGCCTTAATGAGAATGGGTCTACAGGGCAAATAAAGTTTCAATCAG
ACGCTGTTATTAAAGGAGTCATTAATTCGTTTGTCAGCGTAGAAGAATTT
AAAAGGAGAGGGAATCTCGAGGTATTTTAAGGCATTATGAAAGTAATTTT
TAAATTATACTAAATTGTTTCTTAATTAATTATTAGTTGTATGAGACCAT
CTTTGAAAAACCGTTTCTTGCTGCAACTGGGGAATTTTATAAGAATGAAG
CTTCAAAACTTTTGCAAGAAGGCTCAGTTTCTCAATATATGGAAAAAGTC
ATTCAAAAGATAGAGTCAGAGAATAAAAGATCCATCAAGTTCTTGTATCC
CACCTCGTACTCCAAAGTAACTAATGAATGTGAACAGAGAATGGTTGGGG
ATCATATTGAACTATTACACTCTGAGTGTAAGCCCATGGTTGAAAGAGAA
CTCAAGGAGGATTWAAGTAACATGTATCGATTGCTKAAGCCAATATCGGG
TGCTCAAGACGTCCTTTTAGAAGAAATTCAAAATCATATTAAAAATCAAG
GTCTAAAGTCAATTTCTAACCTTAAAGGTCATTCGGTAAGTCGGAAGATC
CACATTTTTGATGGCAAATAGCTAATAAATCTGTCATCTAATCAATCTTA
CAGATTGCAAAAGACTTTGTTGAAAACGTGCTCGAAGTTCATCACAAGTA
TAAAGAGTTGATAACTACCGTATTCAATGGTGATCAACCCTATATGGGTA
CTTTAGACAAAGCATGTKCAGCCATTATCAATCATAGGCAATCTAAGCAG
TTGCCAAAATCCCCTGAATTGGTATAGTATTTCCGGTATTATTACGTATT
GCTCACGTTTTCATAATTTTTATTCATAGCTGGCTCGGTACTGCGATGGT
CTCCTCAAGAAATCTCAAAAGGGAATATCTGAAAATGAAATTGACGATAA
ACTAAATGCTTCCATTACAGTGTTCAAATATCTTGACGACAAAGATGTAT
TTCAAAAGTTTTATGCTAGAAATCTAGGTAAATCTCTTAATATTTAGACT
ATGTGTGTGAATGCAAATGACCAACATCTTGATATTTTTTTCTTCTTAGG
TAAACGATTAATTTATCAGCAATCTCACTCCATGGACTTAGAAGAAGGAA
TGATAAATCGTCTCAAGKAAGCCTGTGGCTACGAATTTACGAATAAATTC
CATAGAATGTTTACTGACATTTCATTAGCTGAAGACTTGAACAATAAATT
TACTAATTATCTTCAAAAAGAATCAATCGAGTTAGGGATCAATTATTTTG
TTCGTGTTCTACAACAAGGAGCTTGGCCTTTAAGTCAAAATGGTCTTTGC
CCTTTAGCTATACCTATCGAATTAGAAAAAACCGTTCAGATGGTAATTTC
CTTGAAATATGAAATGTTTTCTTCACATTCATTTTCTTTTTATATTTAGT
TTGAACAATTTTATACGAAACAATTTTCTGGTCGTAAGCTGACTTGGCTA
CATCATTTAAGCTCAGGGGATGTGAAAATAGGATACCTCGCCAAAACTTA
TATCATCAACATGTCAACTTTTCAGGTAGGTTTGAATACTAATTATTTAC
TGTTGTACTGACTGGATTTTTATTTATTAGATGGCGATATTGCTTTGCTT
TGAGAATGCGGACTCCCTGGAGTACAAAGAGCTTCTTGAGGCGACTAAGA
TGTCTGAAGAACAATTTCCTCGTAACTTACAGTCCCTCCTGGATGCAAAG
CTTCTAGATTGTGACACAGGAGTAAGAAGCATCATATTATTTAATTAATT
TAACCTCTCATGTATCCTATTCCCCTAATTAGGAAATCGACATAAATTCA
ATCATTACATTGAACATGAACTACACCAACAAACGCACCAAATTTCGCAT
AACTCGTACACTTCAAAATGAAACTCCTCAAGAAGTGGAGCATACTCATC
AAGCAGTAGAAGAAGATAGGAAAATGTATCTTCAAGCAACGATAGTTAGA
ACGATGAAAAGTAGAAAGGTCCTTAAACACAATTTACTCATTCAAGAGGT
AAAGCAGATTTATTTAGTTTGATTCAACTTCATTTCGGAGTAACCCTTCT
GACAAATTTGTACTATTTTTTATTTGTTGCCGATTTAGTGACGACTTTGT
TGTTGCAATTTGATTTCTTTCTTATTTTCTTGATAAAAAGAAGGACAACG
TTTTTGGCAATTATTTGATTTTTGTTAAGGGGTCACTTTGTATACAAATA
TATATCTTACTTATTCTTAAATACAATTTTTATTTGTTTCCAACAACTAG
CTGATTCTTGATATTAATCTTCTCGTTTTATTTGTAGGTGCTGAGCCAAT
CCCGGGGTCGGTTTGCTCCTCAAGTAAACATGATTAAAAAATGTATTGAG
AGTTTGATAGACAAGGCCTACATTGAAAGAACTCCCAATGGCAACGACGA
ATACTCCTATATGGCG
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