EMLSAT00000001100, EMLSAT00000001100-696947 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001100
Unique NameEMLSAT00000001100-696947
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1181supercontigLSalAtl2s1181:19651..20494 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001100 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001100EMLSAG00000001100-683866Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004814EMLSAE00000004814-713742Lepeophtheirus salmonisexon
EMLSAE00000004815EMLSAE00000004815-713743Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769428auto769428Lepeophtheirus salmonispolypeptide
EMLSAP00000001100EMLSAP00000001100Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001100

>EMLSAP00000001100 ID=EMLSAP00000001100|Name=EMLSAP00000001100|organism=Lepeophtheirus salmonis|type=polypeptide|length=262bp
MIVYLCLITLLSPLINACFPGSGSGGGGGVTGIRCSGKPEKWGLLIGNSY
TDSGVDTKVKSFLEASEPGYCWRVSKYVKGGQTLAGHANDPTLTNKLKNS
GYDFVVIQAQSQEPSFSQAYVETHVFPAAKRLVQNIRAGSPKADIVFFDT
WGRRNGFDPMQKLLTDRYVEMAKMNKPAKVAPVGEAFRLLMERDRTMFMG
LYTSDNSHPSKSGAYTAASVISQTITGKSNEGSSFRDGFGESANIYNKAG
NDAVTSRNWIFN
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mRNA from alignment at LSalAtl2s1181:19651..20494-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001100-696947 ID=EMLSAT00000001100-696947|Name=EMLSAT00000001100|organism=Lepeophtheirus salmonis|type=mRNA|length=844bp|location=Sequence derived from alignment at LSalAtl2s1181:19651..20494- (Lepeophtheirus salmonis)
ATGATCGTATATCTTTGTCTTATTACTCTTTTATCCCCACTCATCAATGC
TTGTTTCCCTGGATCAGGCTCTGGTGGAGGAGGCGGAGTAACCGGTATTC
GGTGCTCTGGAAAACCTGAGAAATGGGGGTTATTGATTGGTAACAGCTAT
ACGGACTCTGGAGTTGATACAAAAGTTAAAAGTTTTTTGGAAGCAAGTGA
GCCAGGCTACTGCTGGAGAGTATCGAAATATGTGAAAGGTGGACAAACCT
TGGCTGGACATGCCAATGATCCTACTTTAACAAATAAACTTAAAAACTCC
GGATATGACTTTGTTGTTATTCAAGTAAGATGTGCAACTCGTTTAAACTT
TTTCAATTCATATTTATACAACCCTATAGGCCCAATCCCAAGAGCCATCT
TTTAGTCAGGCTTATGTCGAGACTCATGTCTTTCCTGCTGCTAAGAGACT
AGTACAAAATATCAGAGCGGGCAGTCCTAAAGCTGACATTGTATTTTTTG
ATACCTGGGGACGCCGAAATGGGTTTGACCCCATGCAAAAACTTCTTACA
GATCGATATGTTGAAATGGCTAAAATGAATAAACCAGCAAAAGTTGCACC
CGTTGGAGAAGCTTTTCGGCTTCTTATGGAACGGGATCGAACCATGTTTA
TGGGTCTATACACTAGTGACAATTCTCACCCTTCAAAGAGTGGAGCATAT
ACTGCTGCCTCCGTAATTTCTCAAACTATCACTGGAAAATCAAATGAAGG
ATCGAGTTTCAGAGATGGTTTTGGGGAAAGTGCCAACATTTATAATAAAG
CAGGAAATGATGCAGTCACTAGTCGTAATTGGATATTTAACTAA
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