|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1186 | supercontig | LSalAtl2s1186:109356..113275 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001109 >EMLSAP00000001109 ID=EMLSAP00000001109|Name=EMLSAP00000001109|organism=Lepeophtheirus salmonis|type=polypeptide|length=1103bp
MSGPSDTDLILALLSTDNDIRSAAEKKYEELESKTKFLMLFERLSNKQNL
IAVEGRQLCAVLLRQLFSADFEKLFTALGADQEHFKNECLEALHREPDKT
VRKKMGDMVAEVAINLIDVDGNNRWPQFLKFLFDSTNSPNAEIKEIAFHL
FSSVPSVFGNQEAEHFDTIKQMLMSGLMDPNHIEVRTSAARASIKFLLTK
IEDPPAQKRCQDMLTPILTVTMETITKGVDDTVFKALVELAEGIPKYLRA
QLDQLYGEMIKLFSNVELCSNWRYLALEVVVTLSEXAPSMVRNVAGNHIG
TVVQNILKMMMEIEDEDDWATSDELANEDSDSHSIVAESALDRLACALGG
KTIFPHILSCTPTILQQPDWKCRHAALMAISASGEGCHKQMEEYLPQIME
GVMNFVNDPHPRVRYACCQAIGQMSTDFAPCFEKKFHDKVIPGLLHLMDD
SANPRVQAHAGAALVNFSEDCPKNILTPYLDPIIQKLEEILSSKFRELVE
KGNKMVLEQIVTXIASVADTAEEKFVNYYDRFFPCLKYIIQNANTPELRL
LRGKTIECISLIGLAIGGEKFVADAGDIMDLLLKTQTEEPNKDIPDDDPQ
MSYILAAWARICKILGSGFAPYLPLVMGPIMKAVSSRTEVVFLKNDELEN
EDDMDDWTFVSLGNDENFGIRTTGLEEKAAACQMLVCYARELKEHFVDYV
EDTVKLMVPMLKFLLHDKVRSTAADSFPCLLECARIRGPEYLQSTWEYIC
PNLLTAIAIEVDVDVKIDFLRSLARCIELLGMGCLNNEQMQELLGTMIKS
FTGHFERQEERLAKRKEEDYDEGVEEKLEDQNDDDVYILERLGDIIHVLF
ATHKDGFLPVFNQILPFAVKLLGQDHPWTDQQWGLCIFDDLIEYTGPASL
NYQEHFLNPMLHYVNSPVAEVRQAAAYGCGVMGQFGGPSYAQIVSQAIPL
LVKAIQEKRADTDFNNPTENAISAVTKILKWNATAVNVDEILLHWISWLP
VYEDLEESPYIYAYLADLVESNDPRILGANNDNLPKIIALIAESFCLCAL
PTDCEAYIRLVNLVKHVQFSSAQLFEVCLTSLSEPQKXALSEALAAVPVA
AAP back to topmRNA from alignment at LSalAtl2s1186:109356..113275- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001109-696956 ID=EMLSAT00000001109-696956|Name=EMLSAT00000001109|organism=Lepeophtheirus salmonis|type=mRNA|length=3920bp|location=Sequence derived from alignment at LSalAtl2s1186:109356..113275- (Lepeophtheirus salmonis)
ATGAGTGGTCCAAGTGATACGGATCTGATTTTAGCTCTTTTGAGTACGGA
CAACGATATACGATCCGCAGCAGAGGTGAGATTCACGTTTGGTCGTCTTT
AATATTTCTTAATGAATGATGTTTTTAGAAAAAATATGAGGAGTTGGAGT
CGAAGACGAAGTTCCTCATGCTCTTCGAGCGCCTTTCCAACAAACAAAAT
CTTATAGCAGTGGAGGGACGACAACTCTGTGCTGTCCTTCTTCGTCAGCT
CTTTTCTGCGGACTTTGAGAAACTCTTCACTGCTCTTGGAGCGGATCAGG
AGCATTTCAAGAATGAGTGTTTGGAGGCATTGCATCGAGAGCCTGACAAA
ACTGTGCGCAAAAAAATGGGAGACATGGTTGCGGAAGTGGCAATCAATCT
GATCGACGTGGACGGAAACAACCGATGGCCTCAATTCCTTAAATTCCTTT
TCGACTCCACCAATTCCCCTAATGCAGAAATTAAAGAAATTGCATTTCAC
TTATTCAGGTRACGCGTTGAAACTCGAATCCAAAGCAAGAGCAACCCTTC
CTAATTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTTATCTCTTTCCTTCTCCTCATTTCCAGCTCTGTTCCAAGTGTATTTG
GAAATCAAGAAGCTGAACACTTTGATACTATTAAACAAATGTTAATGTCC
GGTCTCATGGATCCCAACCACATAGAGGTGCGTACATCTGCCGCCAGAGC
ATCCATTAAATTTCTTTTGACAAAGATCGAAGACCCTCCCGCACAGAAGC
GCTGCCAAGACATGCTAACCCCAATTCTTACGGTAAAGATTAATATACAC
ATCAAATATATATTCAGTTTCTAAAATCAGCTATCTTTTATGTATTTCAG
GTTACAATGGAAACTATCACTAAAGGAGTCGATGATACAGTTTTTAAAGC
TTTAGTTGAACTTGCAGAGGGTATCCCCAAATATTTGAGAGCACAGTTGG
ATCAACTCTATGGGGAAATGATCAAATTGTTTTCTAATGTTGAGTTATGT
TCAAATTGGCGTTATTTGGCTTTGGAAGTGGTTGTCACTCTGAGTGAAKC
AGCCCCTTCCATGGTACGCAATGTGGCTGGGAATCATATTGGCACAGTTG
TTCAAAATATTTTAAAAATGATGATGGAAATCGAGGATGAGGATGATTGG
GCTACATCAGATGAACTGGCCAATGAAGACAGCGACTCTCATTCTATTGT
TGCGGAATCAGCGCTTGATCGACTCGCCTGTGCTCTTGGAGGCAAGACTA
TATTTCCTCATATCCTATCCTGTACACCAACCATTCTTCAACAACCCGAC
TGGAAATGCAGACACGCTGCCCTAATGGCAATATCTGCTTCAGGAGAAGG
ATGCCACAAGCAAATGGAAGAATATCTTCCACAAATTATGGAAGGAGTTA
TGAACTTTGTGAATGATCCAGTAAGTATTGCATTTGAAAAGTATATTATC
AATATCAAATAGAGCTTTATCATTAAGTTAAAAGTTGATCTTGGATTGTT
TGCATGGATTTTTACGACTTAAAGATATGTAATACTTAGTGATACGAATT
CAAATTAATTTATATTTTTGTCTTCTTAACTTACAGCATCCTCGTGTTAG
ATACGCATGTTGTCAAGCTATTGGACAAATGTCAACAGATTTCGCCCCTT
GTTTTGAGAAAAAGTTTCACGACAAAGTTATTCCTGGCCTCTTACACCTT
ATGGATGACTCGGCCAATCCCAGAGTTCAAGCTCATGCTGGTGAGAATTT
TTGTTTTATCTTTACTATGAATTGTATACTTTAATATTTGATATAGGAGC
GGCATTGGTTAACTTTAGTGAAGATTGCCCTAAAAATATTTTAACTCCAT
ACCTTGATCCAATTATTCAAAAATTAGAAGAAATACTGTCCTCTAAATTT
AGAGAACTAGTTGAAAAAGGTAATAAAATGGTTTTGGAACAAATTGTTAC
TKCCATTGCCTCTGTTGCCGATACTGCGGAAGAAAAGTTTGTCAATTACT
ATGATAGATTTTTTCCTTGTCTTAAGTATATTATTCAAAACGCGAATACT
CCTGAACTTCGCCTTCTTCGAGGAAAAACAATAGAATGTATTTCGCTTAT
TGGTCTTGCTATTGGAGGTGAGAAATTTGTCGCTGATGCAGGAGATATTA
TGGATTTGTTACTCAAGACACAAACAGAAGAACCAAATAAAGATATACCG
GATGACGATCCACAAATGTCTTATATATTAGCGGCATGGGCTCGMATCTG
TAAGATACTAGGATCTGGGTTTGCCCCATACTTACCCCTTGTGATGGGCC
CCATTATGAAGGCAGTCTCTTCCCGAACTGAAGTTGTCTTTTTAAAAAAT
GACGAGCTTGAAAATGAGGATGATATGGATGATTGGACCTTTGTGAGCCT
GGGTAACGATGAAAATTTTGGAATAAGAACCACTGGATTGGAGGAAAAGG
CAGCTGCTTGCCAAATGTTGGTGTGCTATGCACGTGAGCTCAAGGAACAT
TTTGTTGATTATGTTGAAGACACAGTAAAGCTCATGGTACCTATGTTGAA
ATTTCTTCTGCATGATAAAGTTAGATCAACGGCTGCGGATTCTTTTCCTT
GTCTATTGGAATGTGCTCGAATTCGTGGACCTGAATACTTGCAAAGTACA
TGGGAGTACATATGTCCAAATTTGTTAACTGCCATTGCAATAGAAGTTGA
TGTGGATGTTAAGATTGACTTTCTTCGTTCTCTTGCTAGATGCATTGAGC
TGTTAGGCATGGGATGTCTTAATAATGAGCAAATGCAAGAATTGCTAGGC
ACTATGATCAAATCATTCACTGGTCATTTCGAGAGACAAGAGGAAAGACT
GGCAAAAAGGAAAGAGGAAGATTATGATGAGGGTGTTGAAGAAAAGTTGG
AAGACCAAAATGATGATGACGTTTATATTCTTGAGCGACTTGGAGACATC
ATCCACGTTTTATTTGCCACACATAAAGATGGTTTCTTGCCAGTTTTCAA
TCAAATTTTGCCATTTGCGGTAAAGTTGTTGGGTCAAGATCATCCATGGA
CGGATCAACAATGGGGTTTATGTATATTTGATGACCTCATCGAATACACA
GGACCCGCTTCTTTGAATTACCAAGAACATTTTCTTAATCCCATGCTTCA
TTACGTGAATAGTCCTGTAGCAGAAGTGAGACAAGCTGCTGCATATGGGT
GTGGTGTAATGGGGCAGTTTGGAGGCCCTAGCTATGCACAGATTGTGTCT
CAAGCAATTCCCTTATTAGTGAAAGCTATTCAAGAAAAGCGAGCGGATAC
TGATTTTAACAATCCAACAGAGAACGCCATATCTGCAGTTACTAAAATAC
TCAAGTGGAACGCAACTGCTGTCAATGTTGATGAAATTTTACTCCACTGG
TAATTAGATGTTTAGTATTTTTTTTATTGATTTATAATTTTATTTATATA
TTAACAGGATAAGTTGGTTGCCGGTATATGAGGATTTAGAAGAATCTCCG
TACATATATGCATATTTGGCTGATTTAGTGGAATCCAATGATCCCCGAAT
TTTGGGAGCCAATAATGACAATCTTCCCAAAATAATTGCATTGATAGCAG
AGTCATTTTGTTTATGTGCTTTACCAACGGATTGTGAGGCGTACATTAGA
CTTGTCAATCTTGTCAAACATGTTCAGGTATAAATTCGTTTTACATCATC
ATATCAAGTTCTATTATATATGTATAATATTGATGGATTATTTAATTATT
TATTTTTTCCAGTTTTCAAGTGCCCAATTGTTTGAAGTATGCTTGACCTC
GTTGTCAGAGCCTCAAAAGYGAGCGTTAAGTGAAGCKCTTGCCGCTGTTC
CTGTAGCCGCTGCACCTTAA back to top
|
