EMLSAT00000001134, EMLSAT00000001134-696981 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001134
Unique NameEMLSAT00000001134-696981
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s118supercontigLSalAtl2s118:376550..379181 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001134 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001134EMLSAG00000001134-683900Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004961EMLSAE00000004961-713889Lepeophtheirus salmonisexon
EMLSAE00000004962EMLSAE00000004962-713890Lepeophtheirus salmonisexon
EMLSAE00000004963EMLSAE00000004963-713891Lepeophtheirus salmonisexon
EMLSAE00000004964EMLSAE00000004964-713892Lepeophtheirus salmonisexon
EMLSAE00000004965EMLSAE00000004965-713893Lepeophtheirus salmonisexon
EMLSAE00000004966EMLSAE00000004966-713894Lepeophtheirus salmonisexon
EMLSAE00000004967EMLSAE00000004967-713895Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777032auto777032Lepeophtheirus salmonispolypeptide
EMLSAP00000001134EMLSAP00000001134Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001134

>EMLSAP00000001134 ID=EMLSAP00000001134|Name=EMLSAP00000001134|organism=Lepeophtheirus salmonis|type=polypeptide|length=725bp
MEIELNRVDYIRVGLTNPKCLKLLPQLPESGKSQQKVAIGDADGVLQLFS
LKKKEISFLFKTLPECHPITSLELGGAIGTIKDKIFIAIGNEVKGYSKKG
KLFLDFETNLTEKIASMSISGSDLIVCGKHVYNHYRDCRDVNHYLCPDEI
NDALILPGEKVSHLTSVLASGDRTLKVLRDGSSSQIWLTADLPGPPSVLH
LFYNDGGEHGNEVLYGTTDGKLGLIELINRGSDNGKRWILDDQDGMARGS
VQCIENYDITGNGIKDLIIGRTDGNVELYSYEDDESPPNTGESITSVVGG
TVGTSGYDEXIISTYSGWIFGLTTETKDSKIKIESEKAELDSETRQKLTK
LRQEVEQLQNKVNVERDKYQKFAQASTQSNNDAISAIPSLKVNDHLVLSQ
ADASYVLSLEIQTSIDNVLLQSEVPLDLLDVEKNSAVVSYSTCDPESGNV
LLTTYRCQANTTRLEIKIRTIEGQYGTLRAYIXPRLQPKCCQVQEYKVKP
LSLHMRKRFYNDARPRNILRLTGPFTLAEMHFWIHFCLPEVPEKSPSEDM
AQLCFESTFLGTILKIEYGKGTAVFQSDNISTISILKDVLTKEATQKRTP
LDIECDVNEESVYHTLNLIXPKLEAQLLLAKQVALIEPLRDLAANEPDTN
FLSPEYKFILENSETLRNQFKKQPAHLERLYGMITDLFIDQHKFKGNNVK
SKVSNLLEVLDKYSLESLIEFFKES
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mRNA from alignment at LSalAtl2s118:376550..379181-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001134-696981 ID=EMLSAT00000001134-696981|Name=EMLSAT00000001134|organism=Lepeophtheirus salmonis|type=mRNA|length=2632bp|location=Sequence derived from alignment at LSalAtl2s118:376550..379181- (Lepeophtheirus salmonis)
ATGGAAATAGAACTAAATAGAGTGGACTATATTCGTGTGGGCTTAACGAA
TCCAAAATGTCTAAAACTTTTACCTCAATTACCAGAATCAGGAAAATCTC
AGCAAAAAGTAGCCATAGGTGATGCTGATGGAGTTCTTCAGCTTTTTTCT
CTAAAAAAAAAGGAGATATCCTTCTTGTTCAAAACTCTTCCAGAGTGCCA
TCCTATTACATCTCTAGAGCTCGGCGGAGCTATCGGAACAATTAAGGATA
AAATTTTTATAGCAATTGGAAATGAAGTCAAAGGCTATTCAAAGAAAGGA
AAGCTGTTTTTAGATTTTGAAACTAATCTGACAGAAAAAATTGCTTCCAT
GTCTATTTCTGGAAGTGATTTGATTGTTTGTGGGAAACACGTTTATAATC
ACTATAGAGACTGTCGGGACGTGAACCACTATTTATGTCCTGATGAAATC
AATGATGCTCTTATACTTCCTGGAGAAAAAGTATGTGCTTAGCAATTATA
TCAAAATTGATGTTTACGTTCTATTGTAAATTTTGATCAACATTTAAAAA
ACATTTATTCAGGTATCCCATTTAACCTCTGTCTTGGCCAGTGGAGATCG
TACTTTAAAAGTTTTAAGAGATGGTTCATCCTCACAGATATGGTTGACAG
CAGATTTACCTGGACCTCCAAGTGTTTTACATTTGTTTTATAATGATGGC
GGTGAGCATGGCAATGAAGTTCTTTATGGCACAACTGATGGAAAACTTGG
TTTGATTGAATTAATCAATAGGGGATCTGACAATGGTAAAAGATGGATCC
TTGACGATCAAGACGGAATGGCAAGAGGATCTGTACAATGTATAGAAAAT
TACGACATCACTGGAAATGGAATTAAAGATCTTATCATTGGCAGAACTGA
TGGGAACGTAGAATTGTACTCTTATGAGGATGATGAATCTCCACCCGTTC
TTAAATTTACACACGTNAATTATGAATTGACGCCCGTCATTTAAGTTTAG
AGATAATACTTATAGATTTTAATCATTAGAACACAGGAGAGAGTATAACA
AGTGTCGTTGGAGGGACTGTTGGAACGAGTGGCTATGACGAAAWAATCAT
ATCGACATATTCAGGCTGGATATTTGGTCTTACTACAGAAACTAAGGACT
CAAAAATTAAAATTGAATCAGAAAAAGCAGAATTGGACTCAGAAACAAGA
CAAAAGCTTACAAAATTACGGTATTGCCTTTATTTGATGTACAACAATGG
CATWSGTATAACTKGTATAACAACATTTTTTGAACCCATAGACAAGAAGT
AGAACAACTTCAAAATAAAGTCAACGTTGAACGGGACAAATATCAAAAAT
TTGCACAAGCATCAACTCAATCAAATAACGATGCTATATCTGCTATTCCA
TCACTGAAAGTAAATGACCATTTGGTTTTGAGCCAAGCTGACGCTTCATA
TGTCTTAAGCTTAGAAATTCAAACCTCCATTGATAATGTTCTTCTCCAAA
GTGAGGTTCCTCTCGATTTACTTGATGTTGAGAAGAATTCGGCTGTCGTA
AGTTATAGCACTTGCGATCCTGAGTCTGGAAATGTCTTATTAACAACATA
CAGATGCCAGGTATTTTTACTATTGTACATGTCTCTTATATTTGTATGTT
ATGTGCCATAAATAACGCAATTTAATAAAAGGCCAATACAACTAGACTTG
AAATTAAAATACGAACTATTGAGGGACAATATGGTACTTTGAGAGCTTAT
ATTKCTCCCAGGCTCCAGCCAAAGTGTTGTCAAGTCCAAGAGTATAAAGT
AAAACCGCTTTCATTGCATATGCGAAAAAGATTTTATAATGATGCTAGAC
CACGAAATATCCTTAGACTTACAGGACCATTTACGCTGGCAGAAATGCAT
TTTTGGATACATTTCTGTCTTCCAGAAGTACCTGAAAAGTCTCCATCTGA
GGATATGGCTCAACTTTGCTTCGAGTCTACATTTTTAGGCACCATTCTGA
AAATTGAATATGGGTAATTTATTCAAATATAATTTTTTTATATGAAAAAC
ATATTCATTGAGATCTCGAGATAATGATTTCTTTTGCAGTAAAGGAACTG
CAGTTTTTCAGTCAGACAACATTTCAACCATATCCATTTTGAAGGATGTG
CTGACAAAGGAAGCGACGCAAAAACGAACCCCCTTGGATATTGAATGTGG
TAATATATAATTTATTATGATTATTAAACTCATTTAATTTTTTCTATATT
TATATTAATTATTTGGGTAGATGTAAATGAAGAGTCAGTGTATCATACTC
TCAATCTTATTCYCCCAAAACTTGAGGCTCAGCTCTTACTAGCTAAACAA
GTTGCATTGATCGAACCTCTACGAGATTTGGCAGCAAACGAGCCAGATAC
TAATTTTCTATCTCCAGAATACAAATTTATTTTAGAAAATTCAGAAACCC
TGAGGAACCAATTCAAGAAACAGCCCGCTCATTTGGAGAGACTCTATGGA
ATGATTACAGACTTGTTCATTGATCAACATAAATTTAAAGGAAATAACGT
AAAGTCAAAAGTGTCTAACCTTCTAGAAGTTCTCGATAAGTACAGCCTGG
AGTCCCTTATAGAATTTTTTAAGGAGAGCTAA
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