EMLSAT00000001138, EMLSAT00000001138-696985 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001138
Unique NameEMLSAT00000001138-696985
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s118supercontigLSalAtl2s118:399399..402184 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001138 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001138EMLSAG00000001138-683904Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000004977EMLSAE00000004977-713905Lepeophtheirus salmonisexon
EMLSAE00000004978EMLSAE00000004978-713906Lepeophtheirus salmonisexon
EMLSAE00000004979EMLSAE00000004979-713907Lepeophtheirus salmonisexon
EMLSAE00000004980EMLSAE00000004980-713908Lepeophtheirus salmonisexon
EMLSAE00000004981EMLSAE00000004981-713909Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777300auto777300Lepeophtheirus salmonispolypeptide
EMLSAP00000001138EMLSAP00000001138Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001138

>EMLSAP00000001138 ID=EMLSAP00000001138|Name=EMLSAP00000001138|organism=Lepeophtheirus salmonis|type=polypeptide|length=222bp
MEWLFGRKMSPDEMLRKNQRALNKAMRELDRERTKMEQQEKKIIGDIKKM
AKQGQMDAVRIMAKDLVRTRRYVKKFMLMRANIQAVSLKIQTLKSQNSMA
EAMKGVTRAMQNMNRQMKLPQIQKIMQEFEKQSEIMDMKEEMMSDCIDDA
LGDDEDEDESDAIVSQVLDELGLQLNDQLKDVPAGXSTLAAPGAKEKKAV
AAGGVEDADADLQERLDALRRE
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mRNA from alignment at LSalAtl2s118:399399..402184+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001138-696985 ID=EMLSAT00000001138-696985|Name=EMLSAT00000001138|organism=Lepeophtheirus salmonis|type=mRNA|length=2786bp|location=Sequence derived from alignment at LSalAtl2s118:399399..402184+ (Lepeophtheirus salmonis)
CTTGTACTCAATGTGAATGAAAAACATAGTCACATTTATTTCAAAAAAAC
TATTTATTTTTATGAAAAATACAACAATTATATATCCAATGGCAATGGTT
CAATCGAAGAGAAGGGAAGAATATCATAAGGCTGAGWAAGAGAAGCCGCG
AAGTGAAGCGGGAGGATCTCGACTTTTCCGAGTTTATCGGTTAATTAGCA
CTTCGAAGGGTCACAAGAATAGATGGAAGATCTCATTGTGTTGAAGAAGT
TGTGAACTTGGCTCTTATGGAGTATTCGGAGGAGGGGGTGAGTTCTCTCG
AAGTCCATCCGCTGACTGAGAGAGGAGGCCGGTGGAGATTATATCTAATT
ATGTAAGGCATTACGACTTTTTCTTATATCTACCATGATCATGAGAATAG
AATTAATTTCAGGAATACTTGCACGGAGTCGTAGTGTGCAAATTTGTACT
GGCGTTTTTCTTCTTGAACATCGATGAACTCGGATAGGAGTGAATTCAAA
TCATAATTGAATTATTTATTGATAAATAATCACGGTCCTTATTGATTTTT
ATCGATTAATTTTGCGATGATTTTATCGATCCTAACTGTTGGAATAAGAT
TACAGGTAGGATTATACAATCATAGTAGTTTGTACTGTAATATTACAATA
ATAGTAAATAACCAATAACTAAAAAATAAACACGTCTAATATTAATAATG
TAATTTAAATTAAGTAATAACTCGGAAAAGTCGAGATCCTTCCGCTTCAT
CTCATCCTCACCCAATTATACTTTTCACTTCCCGTACCAAATTTATTTCT
ATTAAAATGTTGCGAGAGTTGCATTTCAACTATCCTCTGTCTCTTTCTTC
AATTTCGAGATAGAAAGAGAAAGTATGAGGTGTGGGGCAACTTATACCAG
ATACCCAAGATATTTACGTTCATGTGCACATATCATCACTAATTTTAATA
TAAGTAATTTATAAAAGTGAAGAGGAGAAAATAAATAAAATGAGTCAAGA
TGATTTCAATTCTGACGAAGGAAGCTAGGAACATAAGAGCGGAGTCACTG
AACCTCGACTCGAGAACGTTAAAAAACTTGTTTATTTTTATAAACTCGTT
GTAGTGATAGATAAGATACATGATTATTCATTATTAATTAAAAAATAATT
ATTATTCATAAATTACTCACATTACCCATTACTAGCAAGCTCAGCTGCAA
TTAATAATTATCGACTCTATTCATCACTTAGGGATTCGTATTTCAGATTT
TTGTATGGGGTATCTATACACTCAATAGACTATATGGTATCCACGTAACT
GACGCCCTCTTTTATTTTAAATTAATTCTTGTTACTTGTTCCTGTCAAGT
TTATCCATTCACATTACATTTGTTTATTATAACAAATTAAAACAGAACAG
TGATCATGGAGTGGTTATTTGGTCGTAAAATGAGTCCGGATGAAATGCTC
CGTAAGAACCAACGAGCACTTAACAAAGCCATGAGGGAATTGGATCGAGA
ACGTACTAAAATGGAGCAACAAGAAAAGAAAATCATTGGAGATATTAAGA
AAATGGCAAAACAGGGACAAATGGACGCAGTTAGGATCATGGCTAAAGTA
TGTATTAATAAATAATTCCTACATTGATTTTCCAATCTCCGCTTATTCAG
GATCTAGTGAGGACACGACGCTACGTTAAGAAATTCATGCTTATGAGAGC
AAATATTCAAGCTGTTTCCCTTAAAATCCAAACTCTCAAGTCGCAAAATT
CAATGGCTGAAGCCATGAAAGGGGTTACAAGAGCCATGCAAAATATGAAT
CGGCAAATGAAGCTACCTCAAATACAAAAAATTATGCAGGAATTCGAAAA
GCAATCAGAGATCATGGATATGAAGGAAGAAATGATGTCAGATTGTATAG
GTAATTACTAATTAATAAACTATAGTTCATATCGAATCTATTTTGTGTTT
TAAATAATTGGCCTCACTTTTGAATCATTGATGTAAATGTACTTTTCTCT
TTGCAGACGATGCTCTTGGGGATGATGAAGATGAGGATGAGAGTGACGCA
ATTGTGAGTCAAGTACTTGATGAACTAGGACTGCAATTAAACGATCAGCT
GAAGGATGTTCCTGCTGGAKCGTCTACTCTTGCAGCACCAGGTGCAAAGG
AAAAAAAAGCTGTTGCTGCCGGTGGAGTCGAAGATGCCGATGCGGATCTT
CAAGAACGATTAGATGCTTTAAGGAGAGAATAATAAAAGTTAATTATTCA
ATTGTACTTCTTGAAAATTTCTTCTTTCATCCTGCAAGTAATCTTTAGGA
AAAAAATGTATATTATATTACCAGTCAAGAAAAACACGATTGAAACGAAT
TTTTTTCTAAATGAAATTTTTTGCCTTTGTGATGTTCCCTTAAAGAAACA
GTTTCAAATTTATTTTCAATAATAATGATSAAATAGATTTATTTGTAGAA
AATTGTACTAATACTCTTTCTAAGTAATTTTTACATAATATGTATGTATT
ATAATAAAAGTATATTTAATTGTTGAAAATGTTACAAATTAAAATCCTTA
AAAAGTTTCTTATTTCATCATCAGTAATTTTGTTTTATATTCAATTATTG
TAAATGGCTTTCAAGATTTTATTACTGATAATATGGTATTGTTAATTTAT
AGGGATGGCTTATGAAAATATTTTTTCGTTGGAAATTCTACAACTGAGTC
GCTTTAATACATTTTTTATCTAAATAATTGTCCAACATTGCTTTGTCTTA
GTATTATCTAAATTACATTATCATAATCAAACAAAG
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