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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s118 | supercontig | LSalAtl2s118:590728..599479 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001144 >EMLSAP00000001144 ID=EMLSAP00000001144|Name=EMLSAP00000001144|organism=Lepeophtheirus salmonis|type=polypeptide|length=595bp
MDKPKIDDDGLVIAEEDEATKAAALKKKEKKARKKNKLPNETSEENPSEK
NEHGPMNDQDNEDIVEDNKKKKRRKGAKDEDDKKKKKPAKGTXLAMQEAL
KKVQEEETQRRKEEEERIAREDLLETERLQKKRLEEERKQAKKEREKAKK
EQLRKEGKLLSAKQKQQKAQAETMLAAMRAQGIAVPATGEKKAPRPGTRI
RTKKNKNAEDAAQKEEPTTSVPEEPLKEEIHEIEEELQTKEVIKDAWDAT
SEEEEEELVEEQKTDTSSDAKDKSSKKKDHDASKEDEGGEESEEESSDDE
DSESESEEESSDEENPLSRKEKAEVRIQKRRVENESKRTTDVLRSPVVCV
LGHVDTGKTKILDKLRRTNVQDGEAGGITQQIGATNVPIEVVQEQCKNVK
DVSKTQLKLPGLLIIDTPGHESFSNLRDRGSSLCDIAILVVDIMHNLEPQ
TIESINLLKKKKTPFVVALNKLDRIYEWKSNRHKDIQDVVESQSPNTRME
FNKRAQEVITALAEQGLNASLFWENSDSKTYINIVPTSAHTGEGMGNLMW
LLVSLSQSMLAKRLSFSNELQATVLEVKAIPGLGTTIDIXCEWET back to topmRNA from alignment at LSalAtl2s118:590728..599479+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001144-696991 ID=EMLSAT00000001144-696991|Name=EMLSAT00000001144|organism=Lepeophtheirus salmonis|type=mRNA|length=8752bp|location=Sequence derived from alignment at LSalAtl2s118:590728..599479+ (Lepeophtheirus salmonis)
AAAAGAAAAGGAACGAAAAATTTGAATAAGGGGATATTCAGTCTTTGTTG
AGTGATTGAAAATGCTTCTCCGTGGATTAAAACGGAAATATGATTGTGGA
GATGAAGAAAATGAATCTGAGTACTATCGAAGTAGCTTGCGACACTTTCA
GAACGCAAGCCGCCGTCGAGAATCCTTGAGGATCAAGACTCGGAATGAAG
TTGGAGGAGAGCTCTCAGTTTGTCTTGAGTTAGAAAAGCGTCTTTCTATA
GAGAACTCTCTAATTCAGGGCGTGGAAAAGTTTGTGAAGGAGCCCACTCA
CGGATTGGTTGCATGTTTGGAGGCTGCCAAGACTTTAAAGACCTCTGAGC
TGCGTAGAGACATGCTCAAATACGAATTGAATAAACTGAAACGGGGTCAG
GGACGCCTTCCTCCTTGCATATCCTCTTCATCCCTTGCCGGTCTCAGTTT
ATCCCACATTCGCGTTCCATTGTCCCTGCCAGAAAGGGCACGTGTCAAGA
AATCGGGATCTTATGCTGTCTTTTGTCTCGCCAGAATAGGTTCTCATCTC
TTGCCATCATTACAAATTTATAATTAGTCAATTACTATCACCCTCATTTC
TTATGCCTTTCTCTTTCAATAATACTTAATACTCTTTTCACTTGTTTTGA
AATGAAGGTTTTTTTTGTAATGCGTGGGAATGACTCTTTGTCTATTGTAA
TTATTTATCTCTTTTTCTCCTTTTTAAGGTTCACAAATATATGACACGGC
TCTCCTTTATCCCATTGAACCTGGTAGTACTGCGGATGTTTCGTTTGATG
ATGACCTCATATTTTTTTCTCGAGTTCCTCATTATTTTGAACTTTTAATT
GAAGTATATTCCTACTTGGTTCCTTCAAATCATACTTCCCTCCCACAGCT
GGAAACTCCGCGCAAAATAGCTCGATCCATCAGTAGAGTCATGGGTAAAT
CCATTTTAAAACGGGGTATTTTCGGAGGAAATGAGAGTAATGTACCCAAG
TTCGATTTAACAGCTACAGCTAATTTGACACTTGAAGATTGTTCGAATGA
AATCTGCACTTATGAATTATATGTAGAGGACTTAAATCGTACTACTTCAA
CAGAGTCTTTAAACAATATTAGCTCATCAAGAGCCTTACCTCTCTTTGGA
TCTATGTGCTGTCACTTAGCTGCGCGTCCTTATTGTTGTGAAGAGGAGGT
TTATTCTGGTGAAATGACACTCATGCATCAGAAAAGAGCTTCATCTTCGT
CGACAGCGAAGAAGGTTTGGGGATCTCTAATGAACTGGAAGCTTAGCTTG
TGGAACGATAAAAATTCTAAAGGTTTGGGGAAACAGTCTCTCGTTGACAT
CCCTGTGTCTAAGGACACAACTATCACTGATAAAAAGGGAAACTTGCAAA
TTCGAAACGAACAAGTTTTATGGGAATTTAAGTTCGAACATGACAGTGTT
ATGCTAAGTCAGTGGTTTCAACAATTAAGTCAACATGGTTCTAATCATAG
AAAGTGGAAACATGCTGCTGATATGAAAGTTGTTAGTCCTGGATCTGAAG
AACTTCCAACTAGAAGCTTTAAACGTACGAGAAGTAAACTTGTGTTATTC
TACAATGACGTTTAGCATTAGCGAACAATTAAGATATATTTTCAGAGACC
ATTCTGGAAATTAATCTGATCACTAAGGCATGTATTTAAGAAGATTTTAT
CTGTCGTTCCGGCATACCTTGGAATTCTATTATTTTTTTTTCTTTTTGTT
TATTTGCTTGTTTATTTATATCCGTTACAATTATCAATTAGGTGCATTTG
AAAACATCATTAATTCATTGTAGTAGGACAAATTGTCTTACTAACTAATT
AGATACTATTCCATAACTTTGGATCTTTGATAGATTACCTTAAAGGTATA
CTAGTATATTTGTTCAGGGTATTTATGTTAACATCTTAAATAATTATATG
ATCTTATGTCATGGTGTTAATCTATTTCTATTGTAATTATTTTTTTCTCA
ATTAATTTTATTTAACAGTGGAAAGGTTATATTATTAATTAATTATCCTT
CCTTGCAATGTTAGTCCCTCATTCGAAAGGATTATTGGCAATATGATTTA
TTGTTTATGAAGAAAAAAAATCCCTCTGTATATTTTAAATAATGTATCTC
AATTTTTTGTGCATTAATAACCATTTATTTTATTATAAAGCCTTTTTCTG
GCTTTTGTCATTGTCAGCCTTATTAAAACAAAGAAATAACATACAACAAA
TTAGGGGAAAATATAGCTTTTTATTATGAAGGTTCATTGTTGAACTACTG
CTTCTACTTATAACTACAAAGAGTAAGTACAATCACAAAATTGAAGGACT
AGGAATGATGTAATATTTACATTATGGCCCGCTTGAAGTCTGAGGCTGGA
ATGCTTTTGATGAGGCATAAAACGTTAAACCAAATAAACGTACTAATCGC
TAGGTAGACTACCCTAAGGGAAGAAGGCACAAACTTGAAGTTAAAGGCTT
GGACCGGAATCCAATATAGACAATCACATACAAAAGTAGTAAGAAACTTT
TCTTTACATTCAAGGAGAGGATCTTCTTGTCCCTCTAATAAGCTCAAGAC
AATGTAAAATAAAGCAACCATGATAGGACCGAGAAGGAATTGATCAAGTA
TAATTTTTTTAGAAATTGCACCCTTGGGGAAGCGTGAGTCGAGCCACTTA
TACCACTGATGAAAGATGGGAGGGAAAACTACTGTTCCCAAAACTGCGCA
TCTCTGTACAGATCCGAAATCCAAAGGTTTTTTATTTTTTTCCTTTCTCA
TGCTCAAAATTTGTCGGGACAACTCACCTGCCGTAAAAAGAACACCATAA
AAGCAGCAATTTGAGATGAGAGGATGCGCGATGACCCATTTTTTGACTGT
ACGAATAGTTGGAGGTACTCCGAAACGACGTCGCCGTCCTCGCCCGAAAA
TAATAGAACGAACAAAAAGGTCTAGCGAACCGTGACGGAGTAGTTTGATA
GCAGATACAATTTTTGGGAGAGGCATTTAATCTGAATCAGACTCTGAAGA
TGAACTATACTCAATGACGCGACGGTTCGTATTTTTGAAGAGATCCTTCT
CGTTGTTGTTGTCGTTTTCTTCCTCCTTCTCAATGCACGTGTTGTTTTTC
CCCGATTCTTTCGGAGGCTCTACTGATGAATTGGTGTGTGCGGACTCAAA
GCCTTTAGGCCAAAGACCTTGCTCTCGGATATACTTGATTTGATCTTTGA
GAGGGATGTTTACGATTTCCGCCTTGACCTTTCCACCTTCTGGTATTTTC
TCGATAAGAACGTAGTCTCCTCTCTTAATATAGACGCTCTTTCTAAACTT
ACATGGCATGGATGCCAAGAACTCTTGGCCAGAAGCGTCCACAACAGCGT
GGAGATTGTTGCCTTTTCCAGCTGTGACCTTGACTAACTCCTTGGTTTCG
TCAGGTAAGACGTAATCAGTAACTATTTCTTTGGCAACAAACTTACGCTT
TGTCGTGGATGACATTATATCTTCCTGAAATTAAAGTCAACATGATGATA
AAGGGTAAAATATACTAACTAAAAAGAAGCCTCTTTTCACCAATAAGTGT
TAAATGAGACAGCGAAATTCTTAATTCATTCAATAGAACCTAGTTATTGT
TCTTTGACGTCAGACAAAGCACGTTTCTATTTATTTCAATAGGAACTGTT
TATTGTCTTACCAGCTGATGCGAGGCGCAAGAAACGCGCCAAAAGCATAG
CATTTTTAAGGATAATTATGACTGAACACATTATGAAATGTAAACAAAAC
AAATTATAAACTCAAAACAAAGTTTAAATCACAAAAAACTATACCAAAGA
GTAGTTTGAATTTTTTGACATAAATTCCCACTTCATTTTAGTGTTTACGA
TTTGAGATTTTGTATGTATAGAACGCCCTCTAGTTGTCATTCTTGTACAT
CAAACAGCCCCTATTAAAGAAAAAAGGCTATCTTCCACATGTCTCGTCTT
TTTAGAGCCAGAGAACATGAATCCGTCTTTTGAGTGATGACTTACTTTTC
CTAGAAAACAAAATGAATTTCCAAAGGACCCAACAAAGTGCTAGGCTCAA
TCAATATATCGGGTGTAACTTGTAGCACTAAGGACTAAGAAGAGGTACAC
ACGTCACACTCAGCAATTCAACTAAAAGATAACTGAAGAGAAGGAAAATG
TCGATGAACAGCTCATTTCTGAATTCAACTTTGACGGGCAAGCTTTTGAT
TCATTTATTTCACATCGGAGTATTAATTATTACAAATAATTTATTACTCA
TTAAAGTCATTAGTCTATACTAGATTGTATTAATTAATGATGGTATCATA
TAACACTTCCCAGACAATTCACAAATTCATTGATTAATTATTGTTGACAT
TACGGCTCCTTTGAAGACATCTGAACTAGCATGTTATACAACATTGGTAT
GAAATTTAAACAAATCTATGAAATGAACTTATCATTGCTTGCTTTGTCTA
AATTCCTTAGAAAAAATCAATTAATCTTGGTATGAATCATAAATAAAGAC
TCATGGTAGTTGACAACGGACAATGTAACCCTCGATGTGCAATAGCTCAA
TAGAAATATTCGTTACATCACTAATATATAAGAAAATGTTGCATCTTTTT
TTTTTATAGATTTCAATTTTTGTTTATCCTTTAAGTATGCGCTAAGTTTG
TTACACTCATGATATAAATTAGTTAGTTCTCAATTGTATGGTACTTTATT
ATTTACAAAAAAAATAATTTATAATTATGTTAGATTAACTAGTTTACTAA
ATTTACATTTCTGAACCATTGAAAATCTGACATTAACAAGACCTGATAGT
TGCCATAACTCAATACTCATGTGTTCCGCAACTTCCTGAGTCGATACGGG
TTCATTTTTAATTCAAGTAGAAAATATATACATAGTTGACTAGATGACTT
TGAGATGCGTTGTGTTTCCTATTGTTATTAATGGTCTTGATTAGACTATC
TTCAAATTAAATTTGCATACAACTTTGAGCAAAAGCTCCGCCGACCAAAC
ACATGAGAATTTTGAATGTCCTACCAATGATTTCTATAAATATCACAAAT
TGGTCCCGCACTGAAATGGTTAATAAGATATTGCTAAAACACTTGCTAGT
TAATGCCAACCCCAATGATTCAGTATTCATCCCATGGTGCTTATAGTAAC
TGTAAATTTATAATAAAACGCATAAAATGGGGCCAACAGGATGACAAAAA
ACAAGTTTACAATCGAAACAACCACTACATTCTCAAGGGTGTCGATCGGC
CTTCAATATGAACATATTATTTATTACACAAATAAAAGTTAAAATTTGTA
GCATTTGCTACTACTATAAATATAAATTGTTTGGTAAGAAATTTGGCCAT
ACCATGGTGTCAAGTCTGACGTCATAAAGTCGAGCTTGCGTGGCAAAATA
ACTTACTAAATGAGATTTAATAACTTATTAGAAGATCTTAAGTCGTTTTA
GGACTCATGTATGAGTATATTATAATATTAAATATGTTGATTAATAAAAT
ATACTTGGTGAACTAATATGCAATGTCAATAGTTTATAATAAAATATTGG
ATATAAAAAATAAGTTCTTATGAGTTTGCCTCCAGATGACGTCACAAAAA
GCGGTCTGAAAGAATCTGTTCTATCATTCCTTTATCTAGCTAGCTTTTAG
CTCTCATGTTGGAACTTTCCTTTTCGAATTTATTTTAAAATTCTGTCCTA
TGAATTGGATAGAAAACTGAAAACGTGTCGACGTCACTTACAAACAGTCG
AGATTGTAATGGGGAACAATAAGAAGAACAAGAAGGAAGATGCGGATGAT
AGCGCGTAAGTGGTAGAGATATTAATATTAGTGTATCCAATATTCCAGAT
CGCTTACTGATAATGTTTTTTCTAAATTGCAGCGGAGAGGAGCCAAAGGT
TGAAAAAGTGGAAGTCAAGTCCAAAAAGGCTCGAAAGAAAGATAAGGAGT
TGGAGGAGGCACAAAGGGAAATGGAAAGTCTCGTCTTGGGTGAGGAGCTA
TCCGTGAAAGAAAAATCCAAATCCAAGAAAAAAATAAAAGTATGTTTAAA
TCACTTACTACTTTAAATTGATTCATTTATCCAGTGATTGATTAATTAAT
TAAAACATTATTATATGAAAAGAAAAAGGTTTTGATTTTTTTTCTTTTAA
TTTTATTCAATTAAGACCTTCAAGAATCCATCTAATATCTTATTTAGTGA
GAAGATATTAGGGAGACGATTACTATACTTAAACACAAGTATAATTTCAA
GTTTATTTTTTAAGATTATTAGTATTTGTTCATGTTATTAAATTTTATTT
TTTCTACTTCAATTTATTAGGCAAAAAAGTCTCAAAATAAAAAGATTGAA
TCGGACARCGAAGAGAGTGGTAGGGRTGAAGATGATGGAGCTAAATTAAC
AAAGAATAATTCATCGAGGTTTGCTCAACTCAAGGATGATGATACTGACT
CAGAATATTCACCTTCTCCTCCTATTATAAGAAAAAGTAAATCTGTTTTC
CATAGAATGGAGGTTTATTCTGCCAGTGAATCGAATCCAGACAAAGATTT
CTCTGACGATGATCAAGTGGTAATTTTCAAGGCTAAACCGGAACCTAAGA
AGAAGGAGAAAAAGAAAAAAAGAAAAAGAAACTACAAGAAGAGGACTTAG
ATCAAGTTTTAGCTGAATTAAATATGGATAAACCCAAAATAGATGATGAT
GGGTTAGTCATTGCAGAAGAAGACGAAGCTACAAAGGCAGCAGCTTTAAA
AAAGAAAGAAAAAAAAGCTCGTAAGAAGAATAAGTTACCGAATGAAACTT
CTGAAGAAAACCCATCTGAAAAAAATGAGCATGGCCCTATGAATGATCAG
GATAACGAAGATATTGTAGAGGACAATAAGAAGAAAAAAAGAAGGGTGCC
AAGGATGAAGATGATAAAAAAAGAAAAACCAGCAAAGGGAACGCTCCTTA
GACCATGCAAGAAGCCTTGAAAAAGGTTCAGGAAGAAGAAACTCAACGTA
GGAAAGAGGAGGAAGAAAGGATTGCNNNNNATAACGAAGAWWTGTAGAGG
ACAATAAGAAGAAAAAAAAGAAGGGTGCCAAGGATGAAGATGATAAAAAA
AAGAAAAAACCAGCAAAGGGAACGMTCCTTGCCATGCAAGAAGCCTTGAA
AAAGGTTCAGGAAGAAGAAACTCAACGTAGGAAAGAGGAGGAAGAAAGAA
TTGCTCGAGAAGACTTATTGGAAACTGAAAGACTCCAGAAAAAAAGGTTG
GAGGAAGAGCGTAAGCAAGCTAAGAAGGAACGGGAAAAGGCCAAGAAAGA
ACAGTTACGAAAAGAAGGGAAACTGTTATCAGCTAAGCAAAAGCAGCAAA
AAGCTCAGGCTGAAACCATGTTGGCTGCAATGCGAGCCCAAGGCATAGCT
GTTCCAGCTACTGGTGAAAAAAAGGCTCCTAGACCGGGAACACGCATTAG
GACCAAGAAAAATAAGAATGCTGAAGATGCTGCTCAAAAAGAAGAACCCA
CAACTTCTGTTCCTGAGGAACCATTGAAGGAAGAAATCCATGAGATAGAA
GAAGAACTACAGACAAAGGAAGTTATAAAAGACGCATGGGACGCCACCAG
TGAAGAAGAGGAAGAAGAGCTTGTTGAAGAGCAAAAAACTGATACTTCTT
CCGATGCCAAAGACAAGTCTTCTAAAAAAAAAGATCATGATGCCTCGAAG
GAGGATGAGGGTGGCGAAGAATCGGAGGAAGAGTCATCGGATGATGAGGA
TTCAGAATCTGAATCTGAAGAAGAATCGTCTGATGAGGAAAATCCATTGA
GTCGTAAAGAAAAGGCCGAGGTAAGAATTCAGAAACGAAGAGTTGAGAAC
GAATCCAAAAGAACGACGGACGTTCTTCGTTCTCCAGTCGTTTGTGTTTT
GGGTCATGTCGATACTGGTAAAACAAAGATTCTGGATAAGTTACGTCGAA
CCAATGTTCAAGATGGAGAGGCTGGTGGAATTACTCAGCAAATCGGTGCC
ACTAATGTACCTATTGAGGTCGTTCAAGAACAGTGCAAGAATGTTAAAGA
CGTAATGCTTATTGTTTGATATTTAAATTATAAGTGTACTTTTTTAAATT
AAAATTTCATCATTTAGGTGTCTAAGACTCAATTAAAACTTCCTGGTCTT
CTCATTATTGATACTCCTGGCCACGAGTCATTTTCAAATCTACGAGACAG
AGGCTCATCTCTATGTGATATTGCAATTTTAGTTGTTGATATTATGCACA
ATTTGGAGCCACAAACCATTGAATCAATTAATCTTCTTAAGAAGAAAAAG
ACTCCTTTTGTTGTTGCACTTAACAAATTAGATCGAATTTACGAATGGAA
GTCTAACCGTCATAAGGATATTCAAGATGTTGTGGAATCACAGAGTCCTA
ACACAAGAATGGAATTTAATAAAAGAGCTCAGGAAGTAATAACTGCGTTA
GCTGAACAGGGTCTGAATGCCTCATTGTTTTGGGAAAACTCAGACTCAAA
AACGTACATCAATATTGTTCCAACTTCGGCTCATACGGGGGAGGGTATGG
GAAATCTTATGTGGCTTTTGGTTTCCTTATCACAAAGTATGTTAGCGAAG
CGTCTGAGTTTCTCCAATGAACTTCAAGCTACGGTATTAGAGGTCAAAGC
TATTCCTGGCTTAGGAACGACAATTGATATCNCTTGTGAATGGGAAACTT
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