EMLSAT00000001153, EMLSAT00000001153-697000 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001153
Unique NameEMLSAT00000001153-697000
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1190supercontigLSalAtl2s1190:92088..92396 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001153 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001153EMLSAG00000001153-683919Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005040EMLSAE00000005040-713968Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771922auto771922Lepeophtheirus salmonispolypeptide
EMLSAP00000001153EMLSAP00000001153Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001153

>EMLSAP00000001153 ID=EMLSAP00000001153|Name=EMLSAP00000001153|organism=Lepeophtheirus salmonis|type=polypeptide|length=102bp
MALFTCLHTSAIHVEIIESRSTREFIQNLRKCIGLYGKPEIIYCDNSRNF
VTSNKQLQTLKNMDFNKVQEENYSGEYIEWKFSTSEAPWTNQFTERMEAI
FK
back to top

mRNA from alignment at LSalAtl2s1190:92088..92396-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001153-697000 ID=EMLSAT00000001153-697000|Name=EMLSAT00000001153|organism=Lepeophtheirus salmonis|type=mRNA|length=309bp|location=Sequence derived from alignment at LSalAtl2s1190:92088..92396- (Lepeophtheirus salmonis)
ATGGCTTTATTTACATGCCTTCATACGAGTGCTATCCACGTTGAGATAAT
TGAATCTCGTTCTACACGAGAGTTTATACAAAATCTCAGAAAATGCATTG
GCCTATATGGCAAACCTGAAATTATCTACTGTGATAATTCTCGTAATTTT
GTAACCTCAAATAAGCAACTACAAACACTTAAAAATATGGACTTTAATAA
AGTTCAAGAGGAGAATTATTCAGGGGAATATATTGAATGGAAATTCAGTA
CCTCTGAGGCACCTTGGACCAATCAATTCACAGAACGTATGGAGGCTATA
TTCAAATAG
back to top
Add to Basket