EMLSAT00000001157, EMLSAT00000001157-697004 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000001157
Unique Name	EMLSAT00000001157-697004
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1191	supercontig	LSalAtl2s1191:4478..9327 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000001157 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000001157	EMLSAG00000001157-683923	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000005045	EMLSAE00000005045-713973	Lepeophtheirus salmonis	exon
EMLSAE00000005046	EMLSAE00000005046-713974	Lepeophtheirus salmonis	exon
EMLSAE00000005047	EMLSAE00000005047-713975	Lepeophtheirus salmonis	exon
EMLSAE00000005048	EMLSAE00000005048-713976	Lepeophtheirus salmonis	exon
EMLSAE00000005049	EMLSAE00000005049-713977	Lepeophtheirus salmonis	exon
EMLSAE00000005050	EMLSAE00000005050-713978	Lepeophtheirus salmonis	exon
EMLSAE00000005051	EMLSAE00000005051-713979	Lepeophtheirus salmonis	exon
EMLSAE00000005052	EMLSAE00000005052-713980	Lepeophtheirus salmonis	exon
EMLSAE00000005053	EMLSAE00000005053-713981	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto768497	auto768497	Lepeophtheirus salmonis	polypeptide
EMLSAP00000001157	EMLSAP00000001157	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1191:4478..9327+

protein sequence of EMLSAP00000001157

>EMLSAP00000001157 ID=EMLSAP00000001157|Name=EMLSAP00000001157|organism=Lepeophtheirus salmonis|type=polypeptide|length=801bp
MKSTPHYFRIGIGSDGKTEFNFESFLDTVRKDRVLVIGVSGKSHFGDGKG
SFVDHYIQKDAFGPWNEMDDSGEDFVEGVHDPSSNLIFLHLKNFHDGSNL
LHGIQKMKDMGVQAYLAQGRETTVLMNLFLFHVCHIVIIHFPSPHFDTSY
VQLFKTVETLRWEFMSQISKIMNCCDFPQEKVTNGRFLTPRLLFYFPTPP
QALRVLYTYDENNSKRKEVEKYQDIQMFESNLSSDIICLWNRASMSSVTL
FKIPIRQEFCFVELSQSKVLHHDIFTFDWNELYKSLGSFEINDDYDSPFV
PYYEDIALDESRKNRNFSRFLNNHISWMWSRAKGNSNGNWEFPTSEQWYL
VAKNMFDFFCCPLNNEELRRSNKMESYVNVIKHVSKSICSMALPRALDKY
EDGLPSHYLEEYHNIKLLQAMSVLSIHARGPCAVEYAKTLQEECTYYWAS
SRQQCEAVSLSGKHCIKRIHGDEEIHSSNYVFNSACNCGKTQISRADPFN
IKEANFDFYFRLEDGCCQDMEHWELPFKNPSDNLHLSRISIVEDLMHLSD
TLDQLSIEDSNQKSQTEFEGIGYNVLTEEEFTKDLSPELPYWSLIHMGPS
SKYSHSSGLNQPGFLGNYKHLLSWDIPITKTDLTILKEKWSNLVDTAVKK
MTFNPRGDGVEMGILAKVFFGCEYECSRGHRFIANSPDFKASSSKSSSRG
ISTRGFGAQVAESYMPLYITCCCSSRRSIAVGQLMRIHVVTPKAPINVNL
LPKVMPTEGGPVFVTGCKDGGIHLPPIKVNETNSGKLLQGFINVTEEFED
D

mRNA from alignment at LSalAtl2s1191:4478..9327+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000001157-697004 ID=EMLSAT00000001157-697004|Name=EMLSAT00000001157|organism=Lepeophtheirus salmonis|type=mRNA|length=4850bp|location=Sequence derived from alignment at LSalAtl2s1191:4478..9327+ (Lepeophtheirus salmonis)
AGAGTTATACATATTATGTATATCTATAACCACATTCGAGATAACAGGAT
TCACAAAAAACACATGGAAATGCTCTATTTAGGAGTTGGAGATTTGAGAA
CTTAGTTTCTTGTGTTCAATAACCTAACCCGATCTCCCCTAAAAAGGCGT
AGGGGGAAATGTAGGAAAAAGAATGTTGACCTCTGATGAAGTCATAAGTG
ACGTCACATGTGGCTCTATGATTTAAATCCACGATTCACAACAACAATCT
ACCACCGAGAAATAACATAAATTAAATTAATTCAACTTTAAGGAATGAAG
TCAACGCCGCATTACTTTCGAATTGGAATAGGATCGGATGGAAAGACGGA
ATTTAACTTTGAGTAAGAAGCTTCTTCTCTCACATTGGTTTTATTTACTT
ACTTAGTATTTCTTGTTTCCTTAGGAGTTTCTTGGACACTGTTCGAAAGG
ATCGTGTTCTTGTGATAGGAGTAAGTGGCAAGAGTCATTTTGGGGATGGA
AAGGGTAGTTTTGTGGATCATTATATTCAAAAAGATGCCTTTGGTCCTTG
GAATGAGATGGATGATAGTGGGGAGGACTTTGTGGAGGGTGTCCACGATC
CTTCCTCGAATCTCATTTTTCTTCATTTGAAGAACTTTCATGATGGATCC
AATCTCCTTCATGGGATTCAAAAGATGAAGGATATGGGTGTCCAGGCCTA
TTTGGCACAAGGGAGGGAAACCACTGTTCTCATGAACTTGTTTCTCTTTC
ATGTTTGCCACATTGTCATTATTCATTTCCCATCTCCCCACTTTGATACC
TCCTATGTTCAACTATTCAAAACGGTTGAGACCTTAAGGTGGATTACTAG
TATATTTTATACTTAAGTACCCTAACTCATATGTTTTTTCCTATAATTAG
ATGGGAATTTATGAGCCAGATATCCAAGATCATGAACTGTTGTGATTTTC
CTCAAGAAAAAGTGACGAATGGTCGTTTTTTAACCCCAAGACTCTTATTT
TACTTCCCTACTCCTCCTCAAGGTATGTTTTATCATTACAAATGTCCAAA
GTTTTAAAATATGGGGGGCAATTCAAAGAAGGATGTGGCTTTTTAGGCAG
AGCATTAGACCTCCTTATTTTTCATCAAACTTAGGCAAATTGATATTATT
CCTATTTTACTTGGTCTAAACTAACTAAATATAACAATTACTTTATTTTT
AGACTTTGGCTATGTCTGCCTCATGAGCCATGTAACTTTATTGTCGACGT
TTTTTTTAAACGCTGCTAATGCGTTCAAATTTTAGCATGTACGGTATTTT
TTTAGGCTGGCTATTCATGAATGGAAAGGGGATTTTTTTGTTAAATTCAC
AGATACTTATTTTTATTTAATTTTTGTCTTTCTTAATTTCTAATTTTACA
GAAAGTGTAAGTCGCTATTTAGTTTGACAATTCGGTGCAGGACTCGAGTA
ATAGTCCTTAAGTCTCTCATAAAATTGAAACTTTTGTGGTCCTTCGAGAT
ACAAGCATTTTTAGGAACAATTAGTATTATTATGGTTTAAGGTTCTCATC
TGGTTTGTGTACATGTTTTGATATAGTGATAGCTTGAGATACGATATCCC
CAACATACGAGTGTTGTTTTTTTTTTTGGTTTTTTTAGAAACGAAGTGGA
CTCTGAACAAAAACTTGCTTTGATATAAGAGTTTTTCTTAGATACGAGCT
GGTCAATAGTTCTCAACGGGACTTAAGAGCCACTTTCAGCTTAATTTTAT
TAAAAGTTGTTTTTATGTGATAAATTGTTTTACTTAAAAGCTTCCTCCAG
GAACGAATATTAATTTATTTAAATCATAGTGAAAAAGGGATAGTTAACAG
AATATAATGTTTTTAAAAAGTTATTTTCAACAATAGTTTTATGAATATAT
TTAATGATAATTGGAGTCGCGGAACAGATTAGTCATAAATTTATGTTATT
TTATTTATTTATTTTTTTCGGGATACGAGCTTGGAATAAATCTCGAATGA
ATCAAGATGTCATTAATCCTGCTTTATGTTCTAATTTATTCTCCAAAAAT
TGTCATATTTTTTTCCTTCTAGCTTTAAGAGTTCTTTATACCTACGACGA
AAATAATAGCAAAAGGAAGGAAGTTGAAAAATATCAGGATATCCAGATGT
TTGAATCCAATCTCTCCAGTGACATTATTTGCTTATGGAATAGAGCCTCT
ATGTCATCCGTTACGTAAGAAAATATAGTTATTTTGTGTGCTGTTGTTTC
TTTATGTTGAACACAATGTATTTAATAGATTATTCAAAATTCCCATTCGA
CAAGAATTTTGTTTTGTGGAATTAAGTCAAAGCAAAGTTTTACACCATGA
TATTTTTACATTTGATTGGAATGAACTATACAAATCCTTGGGTAATTAGC
TACTCTTGTATATTATTTCAAATTTCACTTATTTAACTGTTTTATTAGGA
TCATTTGAAATCAACGATGATTACGACAGCCCCTTTGTACCTTATTATGA
AGACATTGCATTGGATGAATCTAGAAAGAATAGAAACTTTTCTCGATTTT
TAAATAATCATATATCTTGGATGTGGAGTAGGGCCAAGGGGAACTCAAAT
GGGAACTGGGAAGTAAGTTTCCATTTTACTTTTTTTATTTTTGTTTAAAT
GTGATTTAGGTTGATGATGATTTCATTCGGAAATACATAAGTCTTTAGTG
ATCAAAATCTTTAGATTAAAAAAAAATAATATTTTTAATATCTGAGGATC
AAAGGTCAGTCAATCTTTAAAAATAAGATGTTGTTATACATAATATATGC
GCTAATTTAGTGATATTCTAATTATATTAGTTTCGTACAAAAGTGATAGT
TAAATCCACGTTTATTTCAGTTCCCCACTTCGGAGCAATGGTATTTGGTT
GCTAAAAACATGTTCGACTTTTTTTGTTGTCCTCTCAATAATGAAGAGCT
GAGACGTTCAAATAAAATGGAATCATACGTGAATGTAATTAAACATGTAT
CTAAATCGATTTGCAGTATGGCACTCCCACGCGCCTTGGATAAGTATGAA
GATGGTTTGCCAAGTCATTATTTGGAAGAATATCATAATATAAAACTCCT
TCAAGCAATGTCCGTACTCTCTATTCATGCTCGTGGCCCATGTGCAGTTG
AATACGCCAAAACTCTTCAAGAGGAATGTACATACTATTGGGCTTCATCA
AGGCAACAATGCGAGGCTGTTAGTTTGTCTGGAAAACATTGTATAAAAAG
AATTCATGGAGACGAGGAAATACATTCGTCTAATTATGTATTTAATTCTG
CTTGTAATTGTGGTAAAACTCAGATCTCTCGAGCGGATCCTTTTAATATT
AAAGAAGCCAACTTTGATTTTTACTTTCGTTTGGAAGATGGTTGTTGTCA
AGATATGGAACATTGGGAGTTACCTTTTAAGAATCCTTCTGATAACTTAC
ATTTATCCCGAATCAGTATTGTTGAGGATTTGATGCATCTCTCTGATACT
TTGGATCAGTTATCAATTGAAGACAGCAATCAAAAATCTCAAACGGAATT
TGAAGGCATCGGTTATAATGTATTAACTGAGGAAGAGTTTACAAAGGACC
TATCACCGGAACTACCATATTGGTCACTGATACATATGGGACCTTCTAGC
AAATATTCTCACTCTTCTGGATTAAATCAAGTTTGTTAATATTATCTAAA
ATTCTATTACATTATTCTAAATTTAATATTTTTTCAGCCTGGCTTTTTGG
GAAATTATAAGCATCTTTTGTCTTGGGATATTCCAATTACAAAAACGGAT
CTTACTATATTGAAAGAGAAATGGTCTAATTTGGTTGATACAGCTGTTAA
AAAAATGACATTTAATCCTAGAGGAGATGGTGTGGAAATGGGGATATTGG
CAAAAGTTTTCTTTGGTTGTGAATATGAATGCTCAAGAGGTCACCGATTC
ATAGCCAATTCTCCGGATTTTAAAGCATCTTCTTCAAAATCTTCGTCTAG
AGGAATTTCCACTCGAGGCTTTGGTGCGCAAGTCGCTGAATCATATATGC
CTTTGTACATAACATGCTGTTGTAGTAGTCGACGATCCATTGCTGTCGGT
CAACTTATGAGAATCCATGTTGTAACACCTAAGGCTCCAATTAATGTAAA
CCTACTACCAAAAGTTATGCCAACGGAAGGAGGGCCAGTATTTGTCACAG
GATGTATGGAACCAATTAAACTTCCACCAAACACATATTGGATTATTCGG
CTTCCTTTCTTATATTCGAGTAAGTATATTTTTAGTTACATTCAGACCTG
TATTAAGCGGTCAGGCAAAGAAAATGAAAAAGCGAGCGCTTGGTGCGAAT
ATGACCTCTTAATCCAGGTTTAGAGTTTAACTGTACATCTTTGTTAATAT
TATTTAATGCTATTTGACGTCATATATAGGTAAGGATGGAGGGATACATT
TACCTCCCATAAAGGTTAATGAAACAAATTCTGGAAAGTTACTTCAGGGT
TTCATTAATGTTACTGAAGAGTTTGAAGATGACTGATTTCTATCTTAATT
GGAAGAAGTATAAAGCTATCATGGATGAAAAAAAAATCGATTTCGCTAAT
CTAGGGAAGTTCTGTTTCAAACCCTGATGAGGCATTGAAATCCTTAGCGA
ACCAAACTATAAAGGATAAATGAGTTGTAAAAGGATGTTTTAATTACTTG
ACCGAAGAAGTATGTTATTTACAAAGTATACCTTGTTTATTTGTTCATAT
ATTTAGCTACTGGAATCTTTTGTTAATTCTTTATGTTTTAATATAATATA
TATATATATATACTATGTGACACCTTATCATAATTTTACTCAGTTCTTTT

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