EMLSAT00000001162, EMLSAT00000001162-697009 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001162
Unique NameEMLSAT00000001162-697009
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1193supercontigLSalAtl2s1193:3511..6552 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001162 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001162EMLSAG00000001162-683928Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005072EMLSAE00000005072-714000Lepeophtheirus salmonisexon
EMLSAE00000005073EMLSAE00000005073-714001Lepeophtheirus salmonisexon
EMLSAE00000005074EMLSAE00000005074-714002Lepeophtheirus salmonisexon
EMLSAE00000005075EMLSAE00000005075-714003Lepeophtheirus salmonisexon
EMLSAE00000005076EMLSAE00000005076-714004Lepeophtheirus salmonisexon
EMLSAE00000005077EMLSAE00000005077-714005Lepeophtheirus salmonisexon
EMLSAE00000005078EMLSAE00000005078-714006Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768392auto768392Lepeophtheirus salmonispolypeptide
EMLSAP00000001162EMLSAP00000001162Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001162

>EMLSAP00000001162 ID=EMLSAP00000001162|Name=EMLSAP00000001162|organism=Lepeophtheirus salmonis|type=polypeptide|length=396bp
MDNFMANQVMLAYXATQVATKEPSEDSEQGTLDSTVVSEKTNKGNNLPFW
GNQQTMNLNPLIWTNITGSPYFKVNLFGFKTYHEVIDEIYYKVSHLEPWE
RGSRKTSGQTGMCGGXRGVGAGGXVSSAYCLLYKLFTLKLTRKQVNGMLN
HCDSPYIRGLGFIYTQPPGDLWSWFEGYLDDEEVIARVPSINWLKKIFFG
CIRLTEIDCKAGGGKLQTIGEMCQQMLTKLEWFDTRFPRIPVSTQKLVDE
YMQSRYSESNHQHHQQEELEEEVEEEEVKEKYPKYLPASHENVVIPSSHE
RRDSSKSKRHRRSGSIDKSPKKRSRERKRSPSSRHHHHKSSKSRRRSSSR
ERHRRHKSKKDTDRSRTPDYQDELRRYSEHRKKSKSRRRSRSRDRR
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mRNA from alignment at LSalAtl2s1193:3511..6552-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001162-697009 ID=EMLSAT00000001162-697009|Name=EMLSAT00000001162|organism=Lepeophtheirus salmonis|type=mRNA|length=3042bp|location=Sequence derived from alignment at LSalAtl2s1193:3511..6552- (Lepeophtheirus salmonis)
ATGGATAACTTCATGGCAAATCAGGTCATGTTGGCTTATSCCGCCACTCA
AGTTGCAACAAAGGAGCCAAGTGAGGACTCTGAGCAAGGAACGCTGGACT
CCACGGTTGTCTCAGAAAAGACTAACAAAGGAAACAATCTGCCCTTTTGG
GGCAATCAGCAGACCATGAATTTGAATCCTCTGATTTGGACCAACATCAC
GGGCTCTCCATATTTCAAAGTGAATCTCTTTGGTTTTAAAACCTATCATG
AAGTGATTGATGAAATCTACTACAAAGGTGCGTGAATTGATTGATGAACG
CAATGATTGTACATATGTTGATGAATACTTTCAGTTAGTCATTTGGAACC
ATGGGAACGAGGATCCCGCAAAACATCGGGACAGACTGGCATGTGCGGCG
GMGMTCGAGGMGTGGGGGCTGGAGGGYTTGTCTCCTCCGCATATTGTCTT
CTCTACAAGCTATTCACTCTTAAATTAACGCGCAAGCAAGTGAATGGCAT
GCTCAATCATTGTGATAGTCCCTATATCCGCGGCCTTGGATTCATGTATG
TGAGGTGAGTTGAGTCCTGTTCCTTTCATTTAAGTTCAAATAATAGCATT
CTGGGCCCTCAACAACAAACCAAGCAACGAGGATTTTTTCCCCAAAATAG
TTTGGATAACAGTTTTTGTATTCTTCAACTAATTACCTATTATTATCTTC
CAATTATATTAATACATTATTCTGATTCATCCTTCCAAGGATCCGCCTGT
ACTACTATTAAAAGGTCGCAAAAAAAAATCCTGACACATTGATACTTTGA
CATACGAGTTTAATTCGTTCTAGAACCGAGCTTGTTTTCATAAAAAAATC
GTGAGTCAATGCAATTTATCATATTAGAAATCAGTAAAAAAAACAAAACT
AAATTTGAAACTGCTCTCCTGTCCCTTCCCCAACTCTCGCCCAGCTCGTA
TGTCAATTTTTTTCTCTCGGAATATACCTCATACCTCAATAAGACTCTCA
TTTGGGGACACTTGAGGTATTATTCTGTTATAATCAATAAGCTACATATA
TCGGAGCCAAATACAGATCCTAACTAATATTCCGAAGTATCTCAACCCAT
CCCAGAATATGAAGTTCATAATTGGCCACGAAGGTTGTCAATTAAATATG
GGACCTTTATACATTATTCATGAAGTATATTCCATCAAAAAAAAATAGTT
TTTTGTTAATTTTTCTTTAAGATTGCTTTTGTGTTGACGTCTACTTAATT
AAAGATAAATATATATTAAGAGTCATATTAAACATTCTGAATATTTTTAG
ATATACACAGCCCCCTGGAGACTTGTGGAGTTGGTTTGAGGGCTATCTTG
ATGATGAAGAGGTATGTTCAAACTCACTTTTTTCTTCTTATTCTTCTCCT
TCCCTAATTAATGGATTTTTACGATGATTTCCCTCGGTTTTCATTTATTA
CTATGCCAATGTAATTATACAGAATATTAAATCTATAATTCACAAATTTG
ATTTCATATACAAACAATGAATTAGAATTACAATATGAGGTTTCATGTAT
GTGTATAATCTATACATATATTTAAACGATGTCGGTGAGGTTTTGGAAAA
TGATCTTCTTATTAGGGTGAGTAATAATTAACCTTCTTTTACTTTAAAAA
AAAAAACAAAAACTTTCAATAAGGTCAAAATTGTTTTACAATTTATGACT
TTTAAATAATTGTGAAAGAAAGAGTAATAAAAGACTTTCAAATCGTTGTT
AGTTGCTAGTTTTGGGAGATGTTTTTGAACTTTTTCACATTCATTGAATT
TCGAGTCATTATATCGATCACAATTTATCTTATTTTTTTCTTCAACAGGA
TATTTAGGTGATTGCAAGAGTCCCTTCCATCAATTGGTTGAAAAAAATAT
TCTTTGGTTGCATCCGTCTCACAGTTAATTAATTCCCTAGTACGAGTGCA
AGTACACATACGATAATAATTTTCTTTAATTATCATTTATTTTGAAGATT
CTAAAAATATTCTTCCAAATCCTCCCAAAACTAGGGAATTTCTCATGCGC
AAACACTTTTAAAGTTGACCGAAAACAAATTCGTGAATAAAATTCATTCT
GAGAAATGTATTATTGTATTTACATATTATGTAATAGTAAAACTGCATAT
AATTATTGCTTTTTTAATTTGTCTTTGTATACCTTGGGGTTATATGTGTA
CTTTTAATGTTCAAAACCGACGTTTTATTATTCATTATTATTATTACTAT
TTAAAGGGTTTCAAATTGATGATGAAAAAAATGATGTTCATTTTTGTACT
TTTTTATTAGTTTCTCTTTCTTTCTTTTTTTCATTTGTCTTAGGAAATCG
ATTGCAAGGCAGGAGGCGGTAAGCTTCAAACGATCGGGGAAATGTGCCAA
CAAATGCTTACTAAACTGGAATGGTTTGACACCAGATTTCCAAGGATACC
TGTTAGTACACAAGTATGAATTTCATTTGTACTCTAGTGTAATTTCCATT
ATTTCTAAATTTTATTTGCCTCTTTTAGAAACTGGTAGATGAGTATATGC
AATCCAGGTATTCAGAATCAAACCACCAGCACCATCAGCAAGAAGAGTTG
GAAGAAGAAGTAGAAGAGGAGGAGGTAAAGGAGAAATATCCCAAATATCT
TCCAGCAAGCCATGAAAACGTAGTTATTCCTTCTTCCCATGAGAGGCGTG
ATAGCAGTAAGAGTAAACGACACCGACGCTCAGGTTCAATAGATAAGTCT
CCAAAGAAACGCTCCCGTGAAAGAAAAAGGTCTCCTTCCTCAAGACATCA
TCATCATAAGAGTAGTAAAAGTCGACGAAGAAGTAGTTCTAGAGAGCGTC
ATAGACGGCACAAGAGGTATTCACGATTATCAATTAATTTGTGGCTTMCA
TTTCTACTATTTTTATTATTTTAGTAAGAAAGACACTGATAGGTCTCGTA
CTCCTGACTATCAGGATGAATTAAGACGCTATTCGGAACATAGAAAGAAG
AGTAAGTCTCGTCGACGTTCAAGAAGCAGAGATCGTAGATAA
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