EMLSAT00000001167, EMLSAT00000001167-697014 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001167
Unique NameEMLSAT00000001167-697014
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1194supercontigLSalAtl2s1194:120183..121520 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001167 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001167EMLSAG00000001167-683933Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005092EMLSAE00000005092-714020Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772663auto772663Lepeophtheirus salmonispolypeptide
EMLSAP00000001167EMLSAP00000001167Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001167

>EMLSAP00000001167 ID=EMLSAP00000001167|Name=EMLSAP00000001167|organism=Lepeophtheirus salmonis|type=polypeptide|length=445bp
MDEEYDCIVLGTGLTXCVLSGMLSVSGKKVLHMDRNRYYGGESASITPLE
ELFTRFNLPTPDESFGRGRDWNVDLIPKFIMANGQLVKLLIHTGVTRYLE
FKSIEGSYVMGKSGRISKVPADEKEALATDLMGIFEKRRFKNFLIFVQDF
DENEPKTWKDIDPKRMMMDEVYKKFGLDANTSDFVGHALALFRDDEYLKR
PCIETIKKIKLYSDSLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYM
LDKPIDELVFEGGKVVGVRSGDETAKCKQVYCDPSYAPNLVKKAGKVVRV
ICLLDHPIPNTKDALSTQIIIPQKQVNRHSDIYVTMVSYTHQVAAKQWFV
AMVSTNVETDNPEREVAPGISLLGNIKQKFVEISDSYEPVNDGRDNHVLI
SKSYDATSHFETTCTDVLDIFKRGTGEEFDFSKVKHTLDEEQDDN
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mRNA from alignment at LSalAtl2s1194:120183..121520+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001167-697014 ID=EMLSAT00000001167-697014|Name=EMLSAT00000001167|organism=Lepeophtheirus salmonis|type=mRNA|length=1338bp|location=Sequence derived from alignment at LSalAtl2s1194:120183..121520+ (Lepeophtheirus salmonis)
ATGGATGAGGAATATGACTGCATTGTTCTTGGGACTGGATTGACGGRATG
TGTTCTTTCTGGGATGTTGTCCGTCTCTGGGAAGAAAGTGCTCCATATGG
ACCGGAACAGATATTACGGAGGCGAATCCGCTTCCATCACTCCCTTAGAA
GAGCTCTTTACCCGTTTCAACCTCCCCACCCCGGATGAGTCGTTTGGGCG
CGGAAGAGACTGGAACGTGGATTTGATTCCCAAATTCATAATGGCGAATG
GGCAATTAGTGAAACTGTTGATCCACACGGGAGTGACTCGTTACCTGGAG
TTCAAGTCCATCGAGGGCTCTTATGTGATGGGCAAGTCCGGAAGGATCTC
GAAGGTGCCTGCCGACGAGAAAGAGGCTCTTGCAACGGACCTCATGGGCA
TTTTTGAAAAGAGACGCTTCAAGAATTTCCTCATTTTTGTTCAAGACTTT
GATGAAAACGAGCCCAAGACCTGGAAAGACATTGATCCTAAACGTATGAT
GATGGATGAAGTCTATAAAAAGTTTGGACTTGATGCCAATACATCGGACT
TTGTGGGGCACGCCTTGGCCCTTTTTAGAGATGATGAGTATCTCAAAAGA
CCCTGCATTGAGACAATCAAGAAAATTAAGCTATATTCGGACTCTTTGGC
GCGGTATGGCAAGAGTCCCTACCTTTACCCTCTCTATGGTCTGGGGGAAC
TCCCTCAAGGTTTTGCACGCTTGAGTGCTATTTACGGGGGTACTTACATG
CTGGATAAACCCATCGATGAGTTGGTGTTTGAAGGCGGGAAAGTTGTTGG
GGTACGCAGCGGTGATGAAACGGCCAAGTGCAAGCAAGTCTATTGCGATC
CTTCTTATGCACCTAACTTGGTGAAGAAGGCAGGAAAGGTTGTTCGTGTT
ATTTGCTTACTGGATCATCCCATCCCTAACACAAAAGACGCTCTCTCTAC
TCAAATCATTATCCCACAGAAACAAGTCAATCGTCATTCGGATATTTATG
TCACTATGGTCAGTTATACGCATCAGGTTGCTGCCAAACAATGGTTTGTC
GCCATGGTTTCCACTAATGTGGAAACAGACAATCCGGAAAGAGAAGTAGC
TCCTGGAATATCCCTCTTAGGAAATATTAAGCAGAAGTTTGTTGAAATAT
CGGATTCATACGAACCTGTGAATGACGGAAGGGATAATCATGTCTTAATT
TCCAAGTCCTATGATGCTACATCCCACTTCGAGACCACATGCACGGATGT
ATTGGATATCTTTAAGAGAGGAACAGGGGAGGAATTTGATTTCTCCAAGG
TCAAACATACCCTTGATGAAGAACAGGATGATAACTAA
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