EMLSAT00000001170, EMLSAT00000001170-697017 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001170
Unique NameEMLSAT00000001170-697017
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1194supercontigLSalAtl2s1194:242665..243279 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001170 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001170EMLSAG00000001170-683936Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005101EMLSAE00000005101-714029Lepeophtheirus salmonisexon
EMLSAE00000005102EMLSAE00000005102-714030Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775164auto775164Lepeophtheirus salmonispolypeptide
EMLSAP00000001170EMLSAP00000001170Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001170

>EMLSAP00000001170 ID=EMLSAP00000001170|Name=EMLSAP00000001170|organism=Lepeophtheirus salmonis|type=polypeptide|length=135bp
MRALSTLLFLSKKGAYSPSSRVFLNISTVKAIHPSVVQFDFVAKYSDDSK
KSAQSLSQRFKEMWKNYWYVLLPVHVSTSVFWFGSFYFLAKSGVDIAGFL
ESAGLSQEYIDKLKSSDMGYYALSYACYKVATPAR
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mRNA from alignment at LSalAtl2s1194:242665..243279-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001170-697017 ID=EMLSAT00000001170-697017|Name=EMLSAT00000001170|organism=Lepeophtheirus salmonis|type=mRNA|length=615bp|location=Sequence derived from alignment at LSalAtl2s1194:242665..243279- (Lepeophtheirus salmonis)
ATGAGGGCACTCTCCACTCTCCTCTTTTTATCCAAAAAAGGGGCTTACAG
CCCCTCTTCGCGAGTCTTTCTTAACATTTCGACTGTCAAAGCCATTCATC
CTTCAGTTGTTCAGTTCGACTTTGTTGCAAAGTATTCGGATGACTCCAAA
AAATCCGGTATAATTCAAATTTTTTTTCTTATTATGTGAACAATTACTTC
ATAGTAGCGCGTGACTTACTTCATTTATATTTGTAATTTTGAGCCAAGAT
GACGTCATAGTAAACTTACATCTATTTTAATTTTTAAATATCCATTTAAT
AATTATATTTTTTTTAACTATGAATCCTTTTTGTAACTGATGATTGAATT
ATAATGTATTCTAGCTCAAAGTCTTAGTCAACGCTTCAAGGAAATGTGGA
AGAACTACTGGTACGTACTTCTTCCCGTACATGTGAGTACAAGCGTATTT
TGGTTCGGAAGTTTCTATTTTTTGGCCAAGTCAGGTGTAGACATTGCGGG
CTTTCTCGAAAGTGCTGGGTTGTCACAAGAGTACATCGATAAACTCAAAT
CCTCAGATATGGGATATTATGCCCTCTCTTATGCATGCTACAAAGTCGCC
ACTCCAGCTAGGTAA
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