EMLSAT00000001187, EMLSAT00000001187-697034 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001187
Unique NameEMLSAT00000001187-697034
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1197supercontigLSalAtl2s1197:60938..63818 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001187 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001187EMLSAG00000001187-683953Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005169EMLSAE00000005169-714097Lepeophtheirus salmonisexon
EMLSAE00000005170EMLSAE00000005170-714098Lepeophtheirus salmonisexon
EMLSAE00000005171EMLSAE00000005171-714099Lepeophtheirus salmonisexon
EMLSAE00000005172EMLSAE00000005172-714100Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771012auto771012Lepeophtheirus salmonispolypeptide
EMLSAP00000001187EMLSAP00000001187Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001187

>EMLSAP00000001187 ID=EMLSAP00000001187|Name=EMLSAP00000001187|organism=Lepeophtheirus salmonis|type=polypeptide|length=215bp
MSTSKNNSTLNLNESNMPLLSEEDKPEKTGETPEKESVTLEMELQEKEDS
GNEKNLEKKKKKATSNGGPKRPSYIDVISHGMNLQNRDCKSINSDIDIGF
DDVLAEPLSSHGFDCIWKLSFVIFSQTKTFLXRLLXAIIXXPASIIWGLI
FAIITVLYVWVLAPLLKIFDFIVSILRKVLLGLMRFTIEPVSASVGHIFS
QVSIHSRRHDLVEKP
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mRNA from alignment at LSalAtl2s1197:60938..63818-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001187-697034 ID=EMLSAT00000001187-697034|Name=EMLSAT00000001187|organism=Lepeophtheirus salmonis|type=mRNA|length=2881bp|location=Sequence derived from alignment at LSalAtl2s1197:60938..63818- (Lepeophtheirus salmonis)
ATGTCTACCTCTAAGAATAACTCTACGTTAAATCTTAACGAATCAAATAT
GCCTCTCCTATCCGAGGAAGATAAGGTAAGAATATATTGCGCAATGCAAA
ACTTTCTGATCTATTCATTTTGCTATTAGCCCGAAAAGACGGGAGAAACC
CCTGAAAAGGAGTCTGTTACTTTGGAAATGGAGCTTCAAGAGAAAGAAGA
CTCTGGAAACGAGAAGAACTTAGAGAAGAAAAAGAAAAAGGCCACATCCA
ATGGTGGTCCAAAGAGACCCTCATACATTGATGTAATCTCTCATGGAATG
AATCTTCAAAATAGGGATTGCAAGTCCATTAATAGCGATATTGACGTAAG
TTTTTCTCCTTCATTTATTTTCATTCAAAATCGAAAATTAGTAGGGGAGT
CGTGATTTTGTTTGTAGTAGAATCATTAATGGAGAAGGGATAATTAAGAT
TTTGTTATAAATATTTCAACTTAGATGACCTTAGACCTTTTTCATTCCGT
AACTAAACATACTTATTTCTTAATATAAAACTCATTTTGGTAATAATGCT
TGATTAACTTTATCAACGGATTAAATTAACTGAAAGTATTTATTATAATT
TCTTATTGTCTTTCTCGAATCTGTAAAAAATCGTACACTCGTACGTAGTA
TTTAAAAGATGAATTAGAAGGAAATTTCATGGGGGATTTTTTATAACATA
CTCATAATTATACAAATATGATGTATTTATTGCAACCTTTCTGAGATAAA
ATATGTTTAATTACTTTATGTACTCAAATGGATGCAAACTTCTCATTATG
AAATGAAGAAATTATAATTGTTTTTTTTCTACAAACCTTAACCAATAATA
TCCTCGGTATCTTCAATAAACCGAGAATTTCCTGAAAGATAAACTTATTT
ACGGATCTATTTCCTATGTGTATAGGTATACTCGTATATGTACATATATT
TTGTGACCTTTGACGACCTTTTCGCATAATTTCCAAAATGCAGGAATAAT
TTATTTATTTCCTTTCTAGGATTTGACAGTTATATTGCCTAATATGAGTT
ATATGCACAGCACACATAATTTTTTTAACGTATGTATACCCAAGTCGGAT
CGTAAAAATATATAATAATTATGATGTATATTTTTTTTACCATAAGTTGA
ACAACCGTTGTGTGCTTCAAAAAACGATTTTTTGTACGTCAAACGGGAAA
TAAATGATATCATAACTTCTTTTTTTTCATAATAAAGATTTGATTTGCCT
CGTAGCAGTTCAGTTAATGAGAAATAATTATGTATGACAAAAATTGATTC
GTTTCATTCTGAACTATACTTTCTAATTTGGGAATTCCCATGTTGTCACA
TTCGGTCACGAAATTAGGACTTAATGTAAAAAAAAATCGTCTTTATAATC
TCACCACATTAAAGATATATTGAAAGGGGAAGGAACATACCCCTTTGGGA
CTCATGATTAGTGTAAACTCGAATAAGCTAACAACAATTATGCGTTTATT
CATCATAGTGTTCTAACTGATGTGGGCATTAAGAGACCGTGTCCGCCCTA
AAACAATGTTTATGTCCCCTTAATTGAAATATAAACATAATTTAAACATC
AGAATTTCAAAGTTATTGGGCTTAACAATCTTTTATTTTGATTTAAATGT
GCCCTTTAGGAATCCAATAATTACATAGATGATAAATTGATTGTCTTTTC
TCTAAAAAGATTATTATGATTGCAAATTGTGGGGCTTTATAAAGTAAATG
TCTTAAGAAAATTCAAGAAAAATAAATAAAAATGTCATCTCAAGCTAATA
ACGGCCCCTTTCCTTGCTAAAATTTGAAATACCCGTCCATGCAAGTAGTT
TTAGTTTGTTCTCTTTCATATCAAAGAGGTTATGGGTAGGTGTTAGTACT
TATCAACAAAACTTATTAAACCAAATGCGGTCCAAAAGGTATTAACTGTC
ATTAATAAGTCAAAACTATTTTAATAAGAAACTAAAAAATGTGATGGTCC
TCTAATTCAAATAGAAGCTTTATGCATATATAGTGAATGTACCATTACTC
TACTATACATATACAAAAAAAACAAATTCTTTTGTACCATTCATTCTGAA
GGTTTTTTATGTTCCTTATGCACCATTCAATTTGTTTTCAGTATTGAGAC
GACTTCTTTTTTACATATATTTTTTTTAGAGATTAAATAGTTTAACAACG
ACGAAAAAATCTTCATTGAATTATTTTTCTTTGGTTCAAAAAACACTTTA
ATACAAAAAAAAAAAATAATAATAATAAAAAAAATAGGCTTCCTGGTATA
TGTATGTATATAGTCACGATTGTCACAATAGACGTTTCTGCTTATTTATT
CTCATTACAAACTCTAATAGATACTAACTTTAATCCTTCCGATTCGTCTA
GTTTTACATATAGGGAGAAAAAAAAAATATATAGCTCAAATCTCAAAACC
CTTTTTTTTTCTTTACAGATCGGATTTGATGACGTTTTAGCTGAGCCACT
CTCTTCTCATGGCTTTGACTGCATATGGAAGCTATCTTTTGTTATTTTTA
GCCAAACTAAAACCTTTTTATMCCGTCTTTTGYCCGCTATCATTSCAAYC
CCTGCCTCTATTATCTGGGGACTTATCTTTGCTATCATCACAGTACTCTA
TGTCTGGGTTCTTGCTCCTCTTCTTAAGATTTTTGACTTTATCGTTTCCA
TTTTAAGAAAAGTAAGATTTACCAAAAATATTCAATGAAAATCACTAAAT
CTCTTTATAATTTTTAGGTTCTTCTTGGTTTAATGAGGTTCACAATTGAG
CCAGTTTCTGCATCAGTTGGACACATTTTCTCTCAAGTCTCAATACATTC
ACGTAGACATGACTTGGTAGAAAAGCCATGA
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