EMLSAT00000001199, EMLSAT00000001199-697046 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001199
Unique NameEMLSAT00000001199-697046
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s119supercontigLSalAtl2s119:5078..7517 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001199 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001199EMLSAG00000001199-683965Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005215EMLSAE00000005215-714143Lepeophtheirus salmonisexon
EMLSAE00000005216EMLSAE00000005216-714144Lepeophtheirus salmonisexon
EMLSAE00000005217EMLSAE00000005217-714145Lepeophtheirus salmonisexon
EMLSAE00000005218EMLSAE00000005218-714146Lepeophtheirus salmonisexon
EMLSAE00000005219EMLSAE00000005219-714147Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768557auto768557Lepeophtheirus salmonispolypeptide
EMLSAP00000001199EMLSAP00000001199Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001199

>EMLSAP00000001199 ID=EMLSAP00000001199|Name=EMLSAP00000001199|organism=Lepeophtheirus salmonis|type=polypeptide|length=357bp
INIHAEGETGDTSNYQANGEFVLEGFQSQRNVVNYTCNGCDAPYPDITFT
IIIRRRPLFYVFNLILPCVLINGIALLVFYVPSESGEKVTLGISALLSMT
VFLMTIRESLYYGVSICLVSFASAMAXVTLNIHHRGIRGNEVPPSVKNII
LNQLGKLFFFQFDSDTKERIIPPPHFGGSISSGINNGSAGAPEHSMMTLN
RSATLSRPTQRADPYLVPSHGMESTCWNNADNHIGSRRSFSVAEDHPHFT
EDGHFCQLNGGLSVPPPLPSEPNISVNFMERISASIEKAERRIAQSEHKD
LIEAQWKQVSLIIDRLLLLVFFLAMSIASLVILTSSPHLYDTGNSHPSSS
ATSSSSG
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mRNA from alignment at LSalAtl2s119:5078..7517-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001199-697046 ID=EMLSAT00000001199-697046|Name=EMLSAT00000001199|organism=Lepeophtheirus salmonis|type=mRNA|length=2440bp|location=Sequence derived from alignment at LSalAtl2s119:5078..7517- (Lepeophtheirus salmonis)
ATCAATATACACGCAGAAGGAGAAACAGGGGATACAAGTAATTATCAAGC
AAATGGAGAGTTTGTTTTAGAAGGCTTTCAGTCGCAAAGAAACGTTGTTA
ATTATACCTGTAACGGTTGTGATGCTCCATATCCCGACATCACCTTTACA
ATTATCATTCGACGKCGTCCACTATTTTATGTCTTTAATCTCATATTACC
ATGCGTTCTTATTAATGGAATTGGTAAATAAGTTTTTTATTAAAATTGTA
TATAGTTATTATACTCTTTTGCTTTCAGCTCTGCTTGTATTTTATGTTCC
ATCAGAGTCGGGAGAGAAAGTGACACTTGGTATTTCGGCTCTACTTTCAA
TGACAGTATTCTTGATGACTATACGGGAAAGTCTGCCTCCAACAGAGAAG
ACACCCTTGATTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
GCCAAAACGTCGAAGTATTTTATAACACATGAACAATTGTCTCCGAGTTA
CCTGATTTTTACCATGAACAAAATATTATTTATGTATGCAAGTTCTGGAA
ACTTGACATTATTGGGGTCATTAACTATGGGCTTTTAGATTTAACAACTT
TTTTAGAAAAAAAGTACATTTGCTCATGTAAATCAAATGCTGACTCAACT
TTTATTCACTTCTGCACAGAATGTGTAAAATTATTAAGTAAGCATCTTCA
CTCCAAAAATGTAATTTTTTTATTTTTAAAATTAAGTCATGTGAGATCTA
ATCCCAAAAAAGTGGATTTCATATTTACAACACTGTTTCCAGATCAACTT
TAAGCAAAACAAAAAATACTTATTATATTTTGCTAAAGGACATATAGTGG
GCTCCGTTTTCATAAAAATTAGTTCAGGAATATAACTGGCTTGGAACTTG
TCTTTTCATAATATATTAAATAATAATTAATTTTAATTTATTAATAAAAT
TGACTTATTATTTTTATTTATATTATAAATATCCCTATGTCATTTTTTAT
TTATATTATAAATATCCCTAATTCACTTTTAATTTAACTTTGAATAAGTT
GTATTCAATATTGTCAATCTTGGATGTGAATATCTCTGGTTTTTCAAAAA
TAAAAGATTTGAAAATTTTATAACTACAAGTATTTTATCTATCTGTACCA
TTCACACTGTTGAAAAATGGCCGGCCTAAATTTGAGAAATATTTCCAGAA
ACGTCCAATAACTAAAGTGAAACCTTTTATTTAATTTTATCAATTTGAAA
TGATCTCGAGATAATGCAATCAGAGGATATAATTATATTATATTTTTAAA
ATTAACAGCAATTAGGGACTGACTTCAAAAATATTAGGTTACCGATATTT
GGAACTTATTTATAAAATATATTATTGCGGCGAATTCACCTGACACGACA
TATAATTTATTAATTTCCTACAAAGATGAAAATAGTTAATTTGACTTAAT
TTCTCCCTTCCTGATAGGCTTGTACTATGGAGTTTCAATTTGTTTGGTCA
GCTTTGCAAGTGCAATGGCTGKTGTAACACTCAACATCCATCACCGAGGG
ATCCGGGGGAATGAAGTTCCACCCTCTGTAAAAAATATAATCTTAAATCA
ATTAGGAAAACTTTTCTTTTTTCAATTTGATTCGGACACTAAGGAAAGGA
TCATTCCACCACCACACTTTGGGGTAAAGGTTGTTTGACCAAATGTTTGG
AATTTGATCATACTAATAGTAAAATGTTCATTTTTAGGGCTCAATAAGTA
GTGGAATAAACAATGGATCTGCTGGTGCCCCTGAACACTCCATGATGACA
TTAAATCGCAGTGCTACTCTTTCACGACCGACTCAAAGAGCAGATCCTTA
TTTAGTTCCCTCTCATGGAATGGAATCAACGTGCTGGAATAACGCTGATA
ACCACATAGGGAGTCGAAGGAGCTTCAGTGTCGCTGAGGATCATCCTCAC
TTCACAGGTGAACTATAAATACATTTAAATATAATGTTGTTCAATGCAAT
ATTTTCTTTGCTAATAGAAGATGGTCATTTCTGTCAATTAAATGGTGGCT
TAAGCGTTCCACCTCCTCTTCCTTCTGAACCCAATATTTCAGTCAACTTC
ATGGAGAGGATATCTGCCTCCATTGAGAAGGCGGAGAGACGCATAGCTCA
AAGTGAGCATAAGGACCTCATTGAAGCTCAGTGGAAACAAGTTTCCCTCA
TCATTGATCGTCTTCTCTTACTTGTATTTTTCTTAGCGATGAGTATTGCG
AGTCTGGTTATACTAACTTCGAGTCCTCATCTTTACGACACAGGAAATTC
TCATCCATCCTCCTCTGCCACATCTTCGTCATCTGGGTAG
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