EMLSAT00000001200, EMLSAT00000001200-697047 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000001200
Unique Name	EMLSAT00000001200-697047
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s119	supercontig	LSalAtl2s119:21583..25034 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000001200 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000001200	EMLSAG00000001200-683966	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000005220	EMLSAE00000005220-714148	Lepeophtheirus salmonis	exon
EMLSAE00000005221	EMLSAE00000005221-714149	Lepeophtheirus salmonis	exon
EMLSAE00000005222	EMLSAE00000005222-714150	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto769505	auto769505	Lepeophtheirus salmonis	polypeptide
EMLSAP00000001200	EMLSAP00000001200	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s119:21583..25034-

protein sequence of EMLSAP00000001200

>EMLSAP00000001200 ID=EMLSAP00000001200|Name=EMLSAP00000001200|organism=Lepeophtheirus salmonis|type=polypeptide|length=64bp
MNFGYFKCHLLCPPKHADSNYNNAIINTNVIVMNDGYIVWLSHGIYKSSC
NISVESTILNGHLH

mRNA from alignment at LSalAtl2s119:21583..25034-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000001200-697047 ID=EMLSAT00000001200-697047|Name=EMLSAT00000001200|organism=Lepeophtheirus salmonis|type=mRNA|length=3452bp|location=Sequence derived from alignment at LSalAtl2s119:21583..25034- (Lepeophtheirus salmonis)
ATGAATTTTGGCTATTTTAAGTGCCATTTGCTGTGCCCTCCAAAGCAGTA
ATAAAAATCATTTGTAGATATAAATTGACAATAAAAATTAGTTTAAGAAT
TCAAATACAGTCTGAATTCAATTTAAAAAAAGATTACAGCTCGTTGACAG
GCCAAATATTCTTTTTATCTTAAAGAGAATGATTAAAAATATCTTCCTTT
TAATGTCGCAGAAAAAAACTCGACTAAGGAATAATCTAAAAAAAGGTCAG
TGATATTGGCTCTGAAATTTGTTTTAGCAGATGATTAATCATCAAAGCCA
TTCATTTTCTCATATTTATTCACAAAAACTTATCCATATAAACCATCTTC
AGAAAAATTGTAAATAATATATTGTTTGCTTGGTTATACGCGAACTTAGT
CAGAATTTGACGACAATAAAATAAATGTTCAATTAATCCAAACAAAATTG
TAGTTTATGAATAATAAATGGATAATGACGATGATTAAAAAATAGAATAA
GTTTGTAGTTTGCATTAAATAATATGAATTGTAATAGTAATTACTAATAA
GAAAATGAATAGTGCGTGGTTATTGTAAAATATACGCGCTTGATTTTAGT
GTTCATGTCCTATATTAAAAGATGTCTTGTCTTTTATCAAAGTAACATCT
TAGTAGTATAATCTACCGTTTTTATAGCTTACTTTGCAAATTTTAAATAA
TATAGACGTATAAAGATGTTCATTACATGGAGAAAAAATCTTAATTTGCA
AGAAATTTGCATAAAATATCGCAAAGTTCAATAAACACACATTTAAAAAT
AAAAATACAAAGAAATATAACTATAGAATACTTTAAAATTTTTAAAGATG
TTCCATATAGCTATTTATATCATTTATAGTAATTTTTTTTTCTATATAAA
AGGTAGTAAAATATGAAACAGTACAAGAAAACTTTTTTAATTATTTTTTA
TGTATGTATATTGTACATATAGGATGTGTAAACATAAAGATAAATAATGA
ACAAGTATCGAGAAAAGGAGAAAATTCATTTTTTTACTTTATGAAGTGTA
GTTCTTTTAAACGTTTGCAATTTCCTCTGGCCTCATTACACCCCCCTACA
AATCAGTTTCAAAACAAATACACATTAATAGAGAGTATGTCCGATAAGAA
TGTAACTCTACACAGTAACACATTTATACAGATTGTGTGAAACAAAATAT
TTTAGAAGGGTTGGGACAAAATTGTAAGGAGTTTGGATTTGCAGTAAAAG
TCGTGGACTTTTTTTTTCGGACCCGTCAAAGGAGGGAGAAAAGTGGCTAT
CTGAAGGAATCTTTAGATCCAAAAAATAATTATGGATTGACGAATAAAGA
CCATAGATACACTTATGAGCCATCTAGTATTTTAACTGCTCTTATTTAAC
TATTTTTACGAAGAACTTTGCTTTTTAATGGACACATCAATTTTAAATTT
GACGGTAGGACATGCCAAAAAAGTTCAAAAGAAGAAGAGTTTTAGAGTTA
TTTTACTTAGTTTTATTTATTTTCTTGTTAAAGTGTAGTTACATTAGGAT
AAAATATATATTTAAAAAAGAAATTGGTTTTTGGTAAAATATTTTATTTA
TCTGACGTTAGTTTTGGTATAATAACTTCAAGGTTGAAGAAAAGTTACAT
CTATTTTTAATTGTCAATTCTGTTTGTGTGTTCGGAAGATAGATTTACTT
TCTTATATCTTTGGAATCATTCAAAAGTAAAAATATGAACAAATCTAATT
ATTTATTATAAAAATCGGTTAAATTTACCTGATATTTTTAACAAATGTAT
TAATTACATTTCAAAATATATTTTACATATATAGTTCATTTGTTTTTTCA
TAGTGCGGACTCCAATTATAACAATGCAATCATTAATACCAATGTCATAG
TTATGAATGATGGGTACATTGTTTGGCTATCTCACGGAATCTACAAATCC
AGTTGTAATATCTCCGTCGAGTACTTTCCTTTTGATATACAAACCTGCAA
AATGAAATGGGCTTCCTGGACATATGATGGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGT
ATATTCTAAAATTTATCAATTTTCTATGGAATGTGATCATGTCTCATAAG
GACAGCAGATCGAACAAAAAATAAAGTCAGGCAAGAATCCATTTTTTTTT
TAGAGGATGATGAAAATTATATCATACCACATAGAAAAACGAGGGTATAT
AAAGTGTTTTAAGGCTATAAATCTTGAATGTAAGGTACATTTATAAGTCC
TCCATATAAATATATACAATAGATAAGTTTCTCCATAACTTATTCTCCAT
TTTCGCCATCTTATAAGGAAAATCAAAGTTATCCCAAACTGCAGACTTGT
AAGTATTAGAGGGAGGAATATCCAACTCCATATCAAATTCGATACCATAA
ATAATTGTTGGTCATGATGCTTAAAGAAAAATCTTTTGTTCGATTCTGTA
AAAAAATAATAAGCTACGCATTTGCTCCAGTTTATTTATATATGTATGTT
ATCTGTAAGAATGATATAAAAAAATCAGCAGAATTTTATATTTTCAAAAT
ATTTAATATGTGATTATATACGTACTGCACCAAGAGTAAAAACAGACCGA
ACCAACCTGCAATATAGCCCTATACCGTACCAGGCTTAATATATATGTAT
ATAGCTTATGTAAAACTTTTTGAATGCATTCTGATTGCCTTAGCTTATGA
CATCATGTAGAAAAGTAGCCCTCTTTTTTGAACATAGATAGTTCAGTACT
CTTCAAATGCTATAGAATTTTCAATAGAAAATTACATTTCAATTTTAAGT
TATCGTTAACAACATAAATTAAAGAATATTGTAGTTTCTATGAAACTATA
GTGCTCCTTGTACGCTTATACGTTTGAATTTTTTTTANNAAATAYGGGAG
CAATAATTAATAATATTGCAGGTCACTAATAAATACTTTTTTTTGAATAT
ATCTATACTAGGATTTCGACAATCTTCACATCCCTGCTCAATACTACTAA
TCTTTACTTTTCCCAATTCTTGAAAGTGTGAGGGCTTCAATGTCATTTTA
TGAAGGTTTTATTTTATCCTGACATATTTTTTAAAACAGTAATTATCTCT
GCAATAATCAAGTTAAAATAGTTAGCCTATATCTTTATAGATAATATGGA
AACAAATTGTCTGAAAATAGTATATTTTGATCCAAAAATCTGACTTTCTC
GTCTTTATATTGACAATACAATGGCGAAAATGACAAGAGATACCCTAGAA
TTATTCCGATAGTGTTTTTTCAATATCTTTTACCAAAAAACGGATCACTC
TTAGATACAAAGATTATGAAACCGGAAACTGAGATATCCGTTTTGTTTTT
ATATAAATGTACTTCTTATAGAAGTACCATTCTCAATGGTCACCTTCACT
AA

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