EMLSAT00000001205, EMLSAT00000001205-697052 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000001205
Unique Name	EMLSAT00000001205-697052
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s11	supercontig	LSalAtl2s11:1132930..1137762 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000001205 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000001205	EMLSAG00000001205-683971	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000005239	EMLSAE00000005239-714167	Lepeophtheirus salmonis	exon
EMLSAE00000005240	EMLSAE00000005240-714168	Lepeophtheirus salmonis	exon
EMLSAE00000005241	EMLSAE00000005241-714169	Lepeophtheirus salmonis	exon
EMLSAE00000005242	EMLSAE00000005242-714170	Lepeophtheirus salmonis	exon
EMLSAE00000005243	EMLSAE00000005243-714171	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto780459	auto780459	Lepeophtheirus salmonis	polypeptide
EMLSAP00000001205	EMLSAP00000001205	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s11:1132930..1137762+

protein sequence of EMLSAP00000001205

>EMLSAP00000001205 ID=EMLSAP00000001205|Name=EMLSAP00000001205|organism=Lepeophtheirus salmonis|type=polypeptide|length=168bp
MGSEIDWEIINSKLPFQRNPEAKAKRRELFKKFDPNGNKYLSLAEVDKGM
RDVLNIDELFDCKAAVNRAFHSAKNASQKDDKYGPEYLEFREFRLIDTGD
DNRVSKEEFCSDKIKASVETWVGKIDDMEAEFASIDANGGGQILFNEFVI
WALKKNLDIEDDIDSQDE

mRNA from alignment at LSalAtl2s11:1132930..1137762+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000001205-697052 ID=EMLSAT00000001205-697052|Name=EMLSAT00000001205|organism=Lepeophtheirus salmonis|type=mRNA|length=4833bp|location=Sequence derived from alignment at LSalAtl2s11:1132930..1137762+ (Lepeophtheirus salmonis)
GTATGAACCAATATCATTTTTCATGCCCTGTTTGCATAGTATAGATGAAC
AAAATAAAAAAAAACAGCTTCTAAATCGATGTTTTTTTTAATTCTAAATT
TCCAATTTATTGTATGCCTTCGACTTATGTGAGGCAAAGGGGATCTCCGG
TCTGTTGATCAAAAGCTCCTCCCTCCTCTCAGTTGAGAGTACATATACTG
CTTATTCTTTAACAATCTTCTTAAGCCGGAGCAAGACAATATTGGTATGT
TTCACTTGAATTTTTCGTTGAATTAATTATTCAATATTTCACTATAATTT
GATTAATAAATATTAATGCTGTATGGTCGTTTGATGTCGTTACATTTATA
TGAGTCAAGCTATTCTAAATATTAATAAGCAATGATTAATTATCATTCCA
ACGTTTTTTTTTAATTTTATTTATTTATTTTTGTGTTTCAACGATGCATC
TTTTGATTGTATCATTGATGCGTGTTTTCATAAATCTTTGGTTACAAATA
TTTAGAACTAATATTATTTATTAATATGCGTCTACAAAACCATGAAATTG
TTGCTTCTAACTTTAAATCACTCCAAATTAGTTGCCAATTCGGTGTTTTT
CTTTCTAGCATTATACTTCTGTATTAAGGGAATTTTGCAATGTAAATGAG
ACCTTCAGCGACTAAAAACCCCATTTAAGCCGGTTTTTGATTTAGTTTGC
TTTTTTCTATTTAAACCACAGGAATATGTTCTATTATATATATGCGAAAA
TATGTTAATTAATTGTCGGTGGACTCAATTAACCGGATTATTCTTTAAGC
TCTCATATAATAATATGACTACATAAAGCTTTCATCAAAATAATTTTTTG
TGCTGTACTATTCAAATAATGTTCATTGGACAGTCCTTTTTTTTCTTTTT
GTTAATTTTTCCCCTCTGTCTAAAGCCCAAAGATTAATTTAAGATAATAT
TAACAACTATCACTTCAACTAGAACTAAGTTTTGCCTCACTAACAATGGA
AAACCGCAGATCATTCAATTACTAAATTTAGTAAATTACAAAAAACAGGG
GCACAATATCAATGATTAAGAGGCTTAAAAATGGACAATTTAGTTATAAA
AATCCTTTTTTTTAAATAAATATTATAACGTCCTGTATCTTTCCAAGTGC
CCTCAAAATTTGCCAAAGTTATTTTTTATTGTCCTTAGCAGTATTTGTAC
AAAATTTGTATTTGTGCAGGGGAAGGGGCGTAATATTTACCCAAAAACAG
AACATAAACATACATAAATCAATCTATAATACATGTTGGATTTAATCAAT
ATTCATTAAATAATTTATTTTGTCTTAATTGAACCTTATAGCAGCATTTG
TCAATGAATTAATCGATATCATCGAATGGATTCGCAAGCTCTTCTTAATT
TTTACTCTAGTAGATGCAAAACACGTCCTTGGTACAATAAATTTGGTCTT
GAAATAATAATCGATATCCAAGCCTAAATAGGGCTTTCTACTTTTAGTAC
CACTCCTTTTTTTCCTCCTTCTTCCTTTTTGAGCTGTCTGCATTTAAATT
ATAAATATATACATTAATATTAAGTAAAATGATAATATGTATACCATAGA
CTTTTGAATTTCTTAATTCTACTTAGATATTGGTTAAAAGTATATTCGTT
TATGAAATATATTCAATGCGCATAATAACATTATTGGCCATTGCAAATGA
TAATGTGTTAATATAACATGTTCACTTCCTCTGTGATTTTTTTTTCTTTC
TCTCTCCTGTACTTTTTTCTTCGAGTATTATCAATTCTCAGTACACATTC
AACCTTTGTAGAGGAACAATCTCAGGTGAATTTCTACATCTCTTTTCATG
TAGACTGTGTTAGTAATTATTTATGATACACAACCCTGCAATAAAATATT
CATATGCAATATGTACATATATGTAGAATAAATCTCTTCACTACCTACAA
TTGTGCTTATCTACTTTGAAAAGTTTATCTTTTGTTCTGACTAAACGCTT
TCTATCGTTTATATCAAAATATATTCATTGTTAAAGTATTATTGTCATTA
GTTTTTGATTGTAGTCGTTCATGATTTATTGTTAAATATGTTAAAATCCT
TTTATTATTTGTAGACTAAAAACCTAAGAAAATGGGATCCGAAATCGACT
GGGAAATTATCAACTCTAAGCTTCCATTTCAAAGGAATCCTGAAGCTAAG
GCTAAAAGGCGTGAACTTTTCAAGAAATTTGATCCCAATGGAAATAAATA
CTTGTCCTTGGCTGAGGTTTGTATGTTAAAGTATATATGGTATACTCGTA
TGTCTAACAATAACCCAAGAAAATACATTTATTGAGCCCTTAAAAGAAAC
CGTAATGTTAATTAACTACAGATTTTTATATATTTTATGGTTTAATGATG
TTCATTGTTACTTCTGTAATCGTGCGTCAAGTCGAGCCATTTTCTCTTTA
AATTTCGTCTTCTTCTCATACTTAATCAAACATGGATAGATGTATAAAAA
AAAGAGGGTTTTGCGAATCGTGTTTTCAGTTTTCAACCACTTATGAATGA
GTACCGAAGTATCACTGTACATCAAAATAATTGGGAAAGMCCCGCTTTGT
CCTGGCCACTATAGTGGTGCGTTGTGAACTTTACATTTGACACCTCTACT
GTGCTATTACAACGTTCCTATTATGCATTCAAAAAAAAAAAAATCAATTT
ATTCTTTAGCGATTTGTTTAAATGATATAATTGGAAGGACTGTTCATGAA
AAATATTTTATTGTTCATTTTTTTTTTTTGTTATTTTTTTCTTTCTCACA
ATTTGTGCTAATTTATATATTATGATTATTACATCATTCAAATTTGGTCA
TTATTATTATACATAAAATTGTTTCAATGATTATTTTCTTATGATTAAAT
TCAAGGTACTTACACAATAATAATTAGTTTAATGTAAGCATTCTCTCACA
AAATATTTTTTTATTGACTTTAATTGGTACTATTGTAATAATAAAATATT
GTGTATGTCCAGACATATTATTCAATAAGTGTTTTAATAGTCTAAATAAG
TGTAATTATGTAATTATAGGTTGATAAGGGAATGCGTGATGTATTAAATA
TTGACGAACTTTTTGATTGCAAAGCAGCTGGTAAGTTAGTTGTTAATGCA
TTTANNNNNNNNNCCTATACGTAGACATTAAGTAATTATATATTTACATC
CTTTTAGTCAATAGAGCCTTTCACTCCGCCAAAAATGCTTCACAAAAAGA
TGACAAATATGGTCCCGAGTATTTGGAATTTCGTGAATTCAGATTGTTTC
TCCAAAACTTAAGACAATTCTTTGAATATTATCAGGCTTTTGATAGGTTT
GTAATATTATTGTTTATTTTATAGCCTTCAGCTGGAAGCCTGTGGTCCGA
ATTTGAACCTTTGAAGGTTCTAAATTGGATCTCAGGTCCCAAGGGGCGCA
AACATAATTAAATGACATGACGGCCCTGTTGGCAGATTTACGGACTTATG
CATACAACTCTGAATGATAATTATGTGGAGGAGCATGGGTGTCCGCAGGG
GGTGGGTTGGAAGGGCTGTAGCAAATTAAGGATTTTTTATTGTTTACAAG
AAAATTAAATATTTGATTTTTTTTTCAAAAATGTAATATTTGAAATTTTG
TTTCAAAATTTTTTTTGAGAATAGCAATGGACTTATGAAATATAATTTTT
CAATTTTTTGGAAATAAATTTAATTTTTTCAAAAAAAAATTTTTGTCAAT
AGTTGTCGATTTTTGGAATTTTTTCAAAAAAAATTTCAAAAATCAAGTCC
CATCCCCACAAAAAAATCCATATATATATAATCCTGCGGACGCCCCTGAG
TAGACACCAGCGCCCTCAAGCAATCTATACTTAAATTAGCCCAGGTTACA
AAAAGTCTCGCCTTCTTTCGTATAATATAAATTTATATTTTTTAGTTTGC
TCATGTGCTATTGAGTAGCTTTGGTCTATAATTATTTTCAAGACATTGAA
TCTCCTCATAGAACTAGCATTATATGTTATTTGTCCATACGTTCATTAAT
TTGATAATTTAGCAATACTAAATATAAAATATTTGGAAGAAAAGTAATAT
ATATATAAAATATCTGTTCTTAAATTTGAACCCTCTGCAGAAGTACATTG
AACTTTACAAATGATTACATTGAGGATTTCAAAATATTTTAATTCCTGTT
TTCCGAAAAACTTTTGTTTTGCTTATCATCTCAAATTGCGACTTATTTTT
GTTGAATCATACTGCATAACACTCTTATTTTTAGAATCGACACTGGTGAT
GATAATCGAGTATCCAAAGAAGAATTTTGCAGTGACAAGATTAAGGCCTC
CGTTGAAACATGGGTTGGGAAAATTGATGATATGGAAGCTGAATTTGCTA
GCATTGATGCTAATGGAGGAGGMCAAATTCTTTTTAACGAATTTGTAATC
TGGGCTCTCAAAAAGAATCTCGACATTGAGGATGATATAGATAGTCAAGA
TGAATAATCTTAAAGCACAATTTATAATTAATTTAAAAGGCCCTATTACA
TATTGTTTTTTGGTGAATTCAATACCTTATTAATGCACTAATATGGTTAA
TGGTCAAGCTTTGCACTTAAATTCAATACTCATTTCTCTTAAAAGGATAA
ATATTTATTTGTAACTATTACCTTATATTAAATAAAGGTGTTTGTTCAAC
TTTATTGTTCTAGTTTTCTTTCTTATTACTGAAGTTCAGTCCATGGATTA
AAATCTTACATTTCTATATCCATGTATAGGGGGTGGTCAATTATTTTTAA
TCGTATATGTTCAAAAAAATAAATCATTAATGC

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