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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s11 | supercontig | LSalAtl2s11:1153615..1160710 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001206 >EMLSAP00000001206 ID=EMLSAP00000001206|Name=EMLSAP00000001206|organism=Lepeophtheirus salmonis|type=polypeptide|length=441bp
MQIYKACRIDLNYTSQLCDNLLDDGNEDYNKKVQDTVSLFMVDAIGRKTI
LNVHALATVLSQALLIANGYFLVEWSNYIYILTVSVPIMLVGGKSTSFIA
TTAFITDISPPRMAXVRLGILHVTQSISEPLANIVGAFLLDSGGFVVVYL
FGFIFSAAAYVSLYVCMMKYKTTITEKRKKSFRELMSPRIFIDCFKTFSK
VRAGKLRMILYLSLVNLILILTSIIGEATIAYLYVRTRYKWEXTDFSFYK
SIDKVTAIFFQSALIPLLSYVNINNENFLICIIISFCLRHLTMGLAYEPW
LYYAGTMLDVIGSYAFSIIRATISDILPKSEMGKVLSMVISLENIMIIIS
IKIYQTIWSMTDTILPGTVYFVSAFMCSWALVSTLIIKFHLKGKSIGKYF
EEVTGKDRDENDLVTSKPKKLKSEEVEANEDGYENNFTRQA back to topmRNA from alignment at LSalAtl2s11:1153615..1160710- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001206-697053 ID=EMLSAT00000001206-697053|Name=EMLSAT00000001206|organism=Lepeophtheirus salmonis|type=mRNA|length=7096bp|location=Sequence derived from alignment at LSalAtl2s11:1153615..1160710- (Lepeophtheirus salmonis)
ATGCAAATTTATAAGGCATGTCGCATCGATTTAAATTATACCTCACAACT
TTGTGACAATCTCTTGGACGATGGTAATGAAGATTATAATAAAAAAGTTC
AGGACACGGTGAGTCTATTTATGTATGTAGTACTCTCTTTACAAAAATAT
AATTAAAGGTTGCACAATTTGGAGTATACTTGGCAGCTATCACTCAGACA
CCTACTATCTTCTTGGCTTTTTACTACGGAGTTTGGTGAGCATTTAAAAA
AATACTTTTTATACAGTAATACCTTGTAATACAAGTGCCCCAAACATACA
AGGTTTTTTAGATATGAGCTGATTCATAGTTGACATGGGGACGTGAGGTC
AGCTACAAGTGAATTAAACTTGTATGTTCAGGTATTACTGCAATATACAT
GCATTAAATAAAGTCATTTAGTTTTGTTTTTAAAACAAGCGGTAAATATT
TTTGTTTTGTTTTTAACTTCTATAAATACAATAACAGAAGACAATCTTAA
CTTTGACTATAAGGCCGTGATTTGTCCTCTTTTTCGAGATTTTATAAATT
TATTTTCCTTAAGAGAAATTTAAAAAAACATAATTTTACTTCTAGGCAAA
ATATATACAAATTTGATTAAGTTATTTAAGCAAAAACATTTGAATGACGT
ATTTTTATAAAAAAATTCAAATAGAAAAAAATGACAACATAATTTTACTT
TTTGATAATTAATTATTCATTCTATTTCGAAAATTGAAAAAAATTCACAT
TGGTATCACATTTCCTTTACTAAACGAAAATATAATTACTTGCTTTTAAA
AACTAAAAACAACATCATTTGACGTTTTAACAAATTACTCAAAGTTTAAA
AACATCTATTGTCTTTCACTAATTAAAATTAAATGTTGAGATTTTTGACA
ATTTTGGCAGAACTTTTGTATTTTATTATAAATACCAAATTTGATCAATG
TAATTTTAGAAAAGTGAGAGAAGACAAAATTTGACAAATACCTTTCAGAA
AAGGCAAAATCAAAAAGCAAATTTTAAAATTTTGACATTTAAGATTCTTT
AGATATGCTGATAAATTTTTTAATCATTTCAAAAAAGATTATATTTTGAA
ATAATAACATAACATGATAACAATTTCTCAAAATTGGGTGGTTCAACCAT
TCTCTTGCCTCTATATTTATCTTTGTCCTAAGGCCTATTAAATGTAAAAC
CAGCCCAGGACAAAAATATATACAAACTCTACTTAGACTGATGTCCTACT
TATCTCTCTTATTTTAAATAAAAACAGCTGTTGGGTGTAAGAAAAGAGCG
AGATTTACTAATATTAAATTTCAAAAGTTAGAAGTTTTATAACTAATTTT
GTAACTAAATTAAATTGTTTTCTAACTTTTTAATACATTTTATTGTTTTT
GTAATATAAAAAACTAAGGATTTGTTATGGAGTTATCTGTTATATTAATA
AAGAAACTTTATATTATGAAAGCAAAATATGCTTGTTCATCAACACTTAT
TTACTCTGGGCAATTCCAGGTCTTACCACTAATATTATATAGAAATTGCA
ACCAGGTGTATGAAAATAGCGTGTTTTAGTAATATTTAATTTTAAATTTT
TGGATTTTAAAAGTTTTAAAATTAATTTTGTATATAATTTCAAATGTTTT
ATATCTTTGGATATATATTTTGTTGTTGTTGTGATTTAAAATATGATAAA
TTGATTTGAGACTAACGTTTTTATCACCTGTATTCATACAAATTGAGTAA
TTTGCACAGTTCTCTAAGTTTAGGACGGATGATGTAACTAGACATGATTT
TGGACTTAGTCCTAAAACCGAAACAACACTATTTCTTAAGGGATTATGAT
TCAAAATAACATTAATATCTAATGTGTTACAGGGTCGACGCTATTGGCCG
AAAAACAATATTAAACGTTCATGCTCTTGCCACTGTACTATCACAGGCTC
TTCTTATAGCCAATGGATACTTTTTGGTAGAATGGTCAAATTATATTTAT
ATTTTAACTGTATCAGTTCCAATCATGCTTGTTGGTATGTTGAGGCTAAT
AACACTTTTATGTATCATATAAGATATTTGATTATTTTTATAACAGGTGG
AAAGAGTACAAGTTTCATAGCAACTACAGCTTTCATCACGGATATATCAC
CTCCAAGAATGGCTGSTGTACGATTAGGSATACTTCATGTCACTCAGTCT
ATATCAGAGCCTTTAGCAAATATTGTTGGAGCTTTTCTTTTAGATTCAGG
TAGATTTTATTAAACAACATATTTCATCTAAGGTCTCCATAAATAGATAA
TTATGATACGTGTATAATACATACATCTACGAAGATGATCTTTCCGGCCT
CAAGGTGAAGATGGTAGCACTTGTAAATAAGAAGATAGTCACAAATAGTC
AGCTATCATCTGTTGATAATAACTTACCAAAGTATCAGCCATTTTGGATA
TGCAAATGTTCTGTAACAGTCGTTTGAATAAAATTGATGTGAGCATTTTT
CAATATAACCTCCCTGTAAATCGACACCCAGCAAGTCTCCCATCTCTGTA
ACTTGTCTCGTCTGTCACTTATTTGGGAGAAGTGTGTAGAGTTACAAAGA
GAATATGTTGAAAAATAAACTACTTTTTCTCAAAAACAATCACATCAACT
CACTCAAACGAATGTTACGTAACAAATTTGCGTTCAAAATGGTTTAAACT
TTAGTTAGTAACTTTCAACAATTGCTAGATCGATATACGAGTGCTACCAT
CTTTATATTGAGTTCAGGACTTTTTCAAATCAACCTCGTATGTTGTGTAC
AAGTGGTGAAAATTATTCATTGAATATCTTCATCTCATTTTTTGGTTGCA
ACTATTATTAAGTAAATAATTCAAGTCCTAAAAAAAATTGATCAACACAC
ATGGTACTATTCTGCAGAAAATAAAAATTTCATTTTCATTAAGGTACTCT
AGGAAAACATATTTGCAGGCATCAGTAGCCAAATGGAATACTCAATATAG
AAAGAAAAAAGAAAGAAATCGGTACTACAAAGTAGTAACCTTATACAAGG
ACTACTTTATTCATACATGAGATGTGAATTTTTTCTCTTTCTTTGTTGAA
AAAAGTAATGCAGATTTTTTTGTACTTTTTTATTAGTGGAATTTTTATGA
AAGTAAAGATATAATTGAATTAGAACAATCTTATAATGAATGTCTCAAGA
GCTTAAAATAACTTTATTAACCATATTTTTTAATATTGATAAATTAAATG
GGAGTTTACAATACAACAAAAGAAGAAGCTTCCATACTCGTTGTCAAGCA
TTAAATTTAAGCACATGAACAACGTGAATACGGAGTTTTACTTATTTTAA
TATCAAACCCCCAGACACTCCTTTACCATTAAATTATACATTTTTAGCTG
AAAGAAGGATTGCATTCCTTTTTCGATTCTTTTTGTTTTCAGTAAAGAGT
TGAAAGTTTAGCAGTAGCTTCTTCATTTTTAAGCATAATATCAAAATACA
AAATAGATCACTAAAATGAATTACCTTAAATTTGAATCATCGACTAAATC
GTCCATTTAAGAAATCGGCAAAGCCAAAAACAAATCCTGTGGATGCCCCT
GATAGCAAAATAGTATGCACAAATGTACAAAAAGAGGAAAGAATATACAA
AAGCGTCCACAGGTGGTGGGATGGATGGGCTATAAGCCCTCCTCCAGATT
AAGAAACTTTTACTTTTTATTAGATTTTTAAAAAAATTACGCTAAAATAG
GGCTAAACATTTTTTTTTATCCAGGAGAGCAAAAAATGTCATATTTKAAA
TTTCCCCCCCCCCCCMAAAATAACATTATATATATATAAATACAATCCTG
CGTACACCCCTGGTATACGACCATCCATTTAGGTCATGTATGGAGCTAAG
CATAATTTTTAATCATATAAGTGAGCCTCAAGAAGGCGCTTCTCTTTACG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNGGGKAAAAAAAAAAATGGAWTTTTTGRTTT
TAAKAAAAAAATTTAATCAAATTTTTCTACATTTTTTTTCAAAAAATTTA
ATTTTCTGGAAATAACCAAAGTTATTAGTAATACAAGGTTATACCATAAC
GCCTCTACGACTGATGTTTGACTTCCACCACGCTTTTAATATTTACTTCA
TAGTGTATGAGTGGTTCCATGTTTTGTCAAAATCTGTTTTTCTTTCCCAG
CAGTCGGTACTATACATTAAATTGAAAATTTTAGCAATATCTACGCCATA
GACTATGAGTGGTTGCTTGTTTTGTTAAAATCTGCCTGTCTTGCCCAGCA
GTAGGTACAATACATCAGATTAAAAATTCTAGGAGGCCCGATAAAATGAA
GGTCTAACCATATATTTCTGTTAACCTTGGAAATAACTGTGTATTTTTTG
ACTTTTGCCCCAAATTTTATATTAGAAATTTAATTTTTGATTTTTTTAGA
ACAACTTGGGATTTTTGAAATATTTTTCCAAAAACTTTTTTGGAAATTTT
ATTTACAAAAAATAAAATGATTTGTGAATAGTTAAAAAAATTTACTATCA
AATTGTATATTTGAAATTTGTTTCACAAATTTAAATTAAAAAAATAATAA
TAGTTTTTGGATTTTTTTTCAAAAAAATTACAAAAGCCAAGTCCCACCCA
AAATTAAATCCTGTGGATGCCCCTGATAGCAAAATGGTATTTTTTTGACT
ATTATTTAAAACATTAATGAATCAGAATCAGGATTTTTTTTTTAAATTGC
CCCATCACCATTCATTACACGATTGATTTTATTCAATTATCTTTTTCATT
ATGAAAAAATCGCCCGTAGTTGGTTAATAAAAAAAAAGAGTGCATGTTCG
ATATATGTACAGAGTATTTTATGTGTAAACCCATCTTTAGAATCCCCAAA
ATTGGATCTATAGATCTAAACTGCCTATAAATTATGAATTTTGAATAAAA
ATGCTCTTTTTTTCATTTTCATATATTTTGCACATTGCCTCAATGATCTG
AGAGGATATATATTATATATATATATTAAAATAAGGGTATTTTATATTGT
TTTGTGGAACAAAATGCATTGGTGTGATCGGAGAGTTCTTATTAGATCCC
TTTAATTTTGTTTTCTCTCTATAAACCATAGGTGGATTTGTGGTTGTGTA
TCTTTTTGGATTTATTTTCAGTGCAGCCGCATATGTGTCACTTTATGTCT
GTATGATGAAATATAAAACTACCATTACAGAAAAGCGGGTATTTTTCAAA
TTTATTGAATTCATATAAATATATAACATCCTTAATTTTTTCTTTATAAG
AAAAAGTCATTTAGAGAACTTATGAGTCCAAGGATATTCATTGATTGCTT
TAAAACCTTTTCCAAAGTACGTGCCGGAAAGCTAAGAATGATTTTATACC
TCTCGCTTGTCAATCTGATTCTAATCGTAAGTACTTTTGTATTGTATCTA
TTTTCATATATCTGCAAGACTCATATTGTTTGTATATTTTTATAAATATA
TCTATAGCTCACTTCCATAATTGGAGAGGCCACAATTGCATATTTATATG
TCCGCACACGTTACAAATGGGAGGMTACAGACTTTAGTTTCTACAAATCC
ATCGACAAAGTGACTGCTATTTTTTTTCAGTCAGCTTTAATTCCCCTTTT
GAGCTATGTTAATATAAATAATGAAAATTTCTTGATTTGTATTATTATAA
GTTTTTGTTTGAGACATTTGACGATGGGTTTAGCCTACGAGCCATGGTTG
TACTATGCAGGTAAGAAATATGTCTATGTAATTATGAACAATCACTCCTG
TCTATTTTTTTTCTTTTAGGTACAATGTTGGATGTCATTGGATCATATGC
CTTCTCCATCATTCGAGCAACAATATCAGATATTTTGCCCAAGAGTGAAA
TGGGTAAAGTGTTATCCATGGTCATCTCCTTAGAGAACATTATGATCATT
ATTTCAATCAAAATTTATCAGACAATTTGGAGTGTAAGTATACACATTTA
TTCAAAAAACAATGCCAATCAGTGCAATCACAATTAGAATTTATAGATAT
TAGTATATAATCAGATTTTTAGCCCGCGAAAATTTCCCTAAATTGAATGA
TTGGTTCTCCAGATATGGGCATTTTTATGTAAAGTAGTCCTTCATAATAG
TTTCAACATTGTAACGACAGAATTCTTTCTAAATTGTCATTATTTAAAGA
TAATTATTTATTAGGGCAAAATAAAGTGTAATTTTTAGAAAGGTAGAATT
TTAAATTCAAGTAGGAACAAATGCATATTAAATTCATATACTAAAGAAGT
ATTTATGTAGGTCATTAATAGAGTTGTAAATTATAAGCACTTTCCGTCAG
CCAAAAAAGAAACCTTAAATGTCTTACAGTTTTGAAAATCTTTGGGGGAG
AGAAGCTTAGCTCTAACGACTTTTCATCAGATTAGATACAAGCAAAGAGG
GAGCGAAATATATAATCCCCTGAACGCCCTTGAATACTTCATATATTTAA
AGCCAATTATCAGCAAGGGAAAATATTTGTTATTTCCAAATATAGAGTAT
TCAATTGTGATAAAGTACGGTTAAAACCATTGAATTAATTTTGTTGAAAC
CCCCAATTTTTTTTAATTCGAGTACCTTTTTTTTATATTGAATATAGATG
ACCGATACTATTCTACCAGGAACAGTGTATTTTGTATCTGCCTTTATGTG
CTCATGGGCTCTTGTGAGTACATTAATAATAAAGTTCCATTTGAAAGGAA
AAAGTATTGGTAAATACTTTGAGGAAGTTACGGGAAAGGATAGAGATGAA
AATGATCTTGTGACCAGTAAACCCAAAAAATTGAAATCGGAAGAAGTTGA
AGCTAATGAAGATGGATATGAAAACAATTTTACAAGACAGGCTTAA back to top
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