EMLSAT00000001210, EMLSAT00000001210-697057 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001210
Unique NameEMLSAT00000001210-697057
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s11supercontigLSalAtl2s11:1246203..1249413 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001210 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001210EMLSAG00000001210-683976Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005269EMLSAE00000005269-714197Lepeophtheirus salmonisexon
EMLSAE00000005270EMLSAE00000005270-714198Lepeophtheirus salmonisexon
EMLSAE00000005271EMLSAE00000005271-714199Lepeophtheirus salmonisexon
EMLSAE00000005272EMLSAE00000005272-714200Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780560auto780560Lepeophtheirus salmonispolypeptide
EMLSAP00000001210EMLSAP00000001210Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001210

>EMLSAP00000001210 ID=EMLSAP00000001210|Name=EMLSAP00000001210|organism=Lepeophtheirus salmonis|type=polypeptide|length=317bp
MAYPSLPHSFLHNIPDELVMSKKFIIVGGGYGGIKLASIFKHWGVPFILI
DPKDFFFVNVAGLRAVLYPENIMIPYAPTFGDHFIQGTVSDIDFEKREVT
VSPDIGKFGYTHLVIAVGSRGPFPGKSDAKTKEDVRKCYNDVAGDLDKAT
DIVIIGGGPVGVELSCEVAERYSSKFITLIHPSENXASKRYDSTGFQNRI
KKKLKQFTIEVVQVEGFDDVYAIGDCCNTDEEKLAIHAENQAECIAHNLL
RELEDEEPKPYTTQFDGMFLSLGSRHGAGVFNGWXVPSWIVSLLRSRSLQ
YPKYWELMEQKEPDYDF
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mRNA from alignment at LSalAtl2s11:1246203..1249413-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001210-697057 ID=EMLSAT00000001210-697057|Name=EMLSAT00000001210|organism=Lepeophtheirus salmonis|type=mRNA|length=3211bp|location=Sequence derived from alignment at LSalAtl2s11:1246203..1249413- (Lepeophtheirus salmonis)
ATGGCCTATCCTTCCTTGCCTCATTCATTTCTGCATAACATCCCTGATGA
ATTAGTTATGAGTAAAAAGTTTATCATTGTTGGAGGAGGTTATGGTGGAA
TAAAGCTTGCATCCATATTCAAACACTGGGGCGTTCCATTTATTCTCATT
GATCCAAAGGATTTCTTTTTCGTCAATGTTGCAGGACTAAGAGCTGTCTT
ATATCCAGGTTATAATTTGGAAATAAAATATACATTTCAATAATTTCCCT
CTCAGATTTTACAGAGAACATCATGATCCCCTATGCTCCAACCTTTGGAG
ATCATTTCATACAAGGAACTGTGAGTGATATAGACTTTGAGAAACGAGAA
GTCACTGTGTCCCCTGATATTGGAAAGTTCGGCTATACACATCTCGTCAT
CGCAGTTGGAAGTAGGGGCCCTTTCCCAGGGAAGTCAGATGCTAAAACTA
AAGAAGACGTTCGAAAATGCTATAACGATGTGGCAGGYGATTTGGACAAA
GCCACTGACATTGTCATCATCGGGGGAGGACCTGTTGGAGTTGAACTGTC
CTGTGAAGTTGCAGAGCGATATAGCTCCAAGTTTATCACTCTTATTCATC
CCTCAGAGAATRTAGCCTCCAAAAGATATGACTCTACGGGATTTCAGAAT
AGAATAAAGAAGAAGTTGAAGCAATTCACTATCGAGGTTGTTCAAGGTTA
GAGTTATATATTATAATATGTACAACCATCGTATGCATATCAAGGGATCT
TTACGGTATTTGAAATATTTTTGTCGTAATTACAAGGAATTTGCTTCATT
AAAATAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTTATATAATATGTACGTGATTAGACTG
CCCCTTTTTCAGGCTAATATTATTTCTCCCTGTACAAAAATCTTTTCTGG
TGGAGAAAATCAAAAAAACTTTCAAAGTTTTGAGATCTCTCCAGAAATTT
TACTTTGAAAAAATAAAAAAAAATAAAAAAATAAAAAGTGATTATTACTT
TGAAATTGATCATTTTTAAACCTCTTCGTATGATATGAGACAAAATTGAA
CTTTTTATACTTTTTGGTAATCAATTAAAAATGTATGAATATTTAGTTTA
ATAATTAGATAAGTCTAGAATGTGCTCAACGATTTGCGGTTTCCCTGTAT
TGTCGAAGATAATCTTCGAGTCTAATTCATGTACTCTGAAAATTTAAGGT
ACTTTAAAGAGTAATTCATATACAATGAAAAAAATGGAATGACTTTCGAG
ACGTGTTGAATTGCAAGTCTACAAAAAATGAACTCGAATTCTTTCGTTAG
TTTTTTCGGAAGGGGCTTGTTTATTTTTTTTTAAATAATTTTTTCTCTAC
TGTATAATTTGATGAAATTGCCTTTTTTGAGAAAATCAAATCCTAATTTC
CTGAGCGATAATCTTTCAAAATTCCCTTGTTTGGAAAGGGCTACATCCCC
TTCAAACAACTCCCTGTAGACGCTGAAGAAGTACGATTTCTCTAATAGTC
CTTGGTTTGAAAAAATTATATTTACCTTTAAAGACTCATAACAACCGCTT
GTAGGACTCAAAAAAATTATTAGACCCGGAATGATAGAACTATAGTCTCT
GTAGTTTTTTTTAGACCGATCCAACACTATCTCTCACAGAAAATATATTT
GAGCAGAGTAAAAATATTAACCCAAAAATAGGGACAGTCTAATAAACATT
GTACATAGCTAAATTTAAATGATACGTAGACTATACATCCATTTGGATGT
AGTGCTATCAAAAGCAAAGACCCTGAAATTCACTCTGCATAGGTATAACA
GGAGGAAACAAAGATTGAGAAAGCAGTTGCAATAACATATGTACAAAAAT
ATATTCATTAATACGCGAGGAGGCTATTAAATCATATACTAATAAACCTC
CCACCTGTGGGAGTAATTTGAAACTTGTATTTTTTTATGTATTTAGTATT
ATATTCTTTTAACTAGCGAGTATTTTTTTTAAATATGAGCTTTATTAGAA
AAATGTATTACTAATAAAAAATACTACGTTTTTTCATGACAAAAACTTTC
CAACTTCTAGGACGTGTCAGTAACTTGGAGGAGCTTACCTTTGGAACATT
TTTAAAACAGACAGTTAGGACAATGGAGGTACAGGGCATCATTATTCAAC
TAATAATCACTTAATTATGAGTATATATCAATGTTTTAGGGAAATGAATA
CTCTTGTGATGTGGTTATGAACTGCACAGGAATCTCACCGGAGATCAGTC
TCACAAATAAAATATTTGGTGAATACATATGGGTATATGTTGTGTACAAG
TTATAACTTGTATGTGCAGATTGTACAAGTTCATATTTATACGCCTTATA
ACGCCTTATTTGTTTACAAGATTATTGGATCCATTAATAAAAATTAAAGG
AAATTTATTTCATTTTGTTGTATTGAAATTACAGTTTTAATATTAAAACT
ATGGGCATTTAATATTTATAATGGACCATATTTAATTATTGCCCTATCCC
AACTTTAAATTCTTCATTTCATTTTTTTATTAGCAACTTGTACAATCTGC
TTATACAAGTTACAAATTGTGCATGACATATATATATATATTTTTGAACT
TACATGGATGAACTCATATCTCTATTTATTAAACATATAGATGATTCAAA
ATTTGACAGATTTTTTCGACTCTGTGTCACACCGGATCTAAAAGTAGAGG
GCTTTGATGACGTTTATGCCATTGGAGATTGCTGCAACACGGATGAGGAA
AAACTTGCTATTCATGCGGAAAATCAGGCAGAGTGTATTGCTCATAACCT
TCTCCGAGAATTGGAAGATGAGGAACCGAAACCGTATACAACACGTTTGT
TTTAAATCCTTAATTTATATGTTATAATGAGGTGTGCTTTTTTATAGAGT
TTGATGGTATGTTTCTATCTTTGGGCTCTCGTCATGGCGCAGGGGTCTTT
AATGGATGGMCTGTTCCTTCATGGATAGTCAGTTTACTACGGAGTCGCTC
ATTGCAGTATCCCAAGTATTGGGAGCTCATGGAGCAAAAGGAACCAGACT
ATGACTTCTAA
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