EMLSAT00000001225, EMLSAT00000001225-697072 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001225
Unique NameEMLSAT00000001225-697072
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s11supercontigLSalAtl2s11:418721..420478 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001225 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001225EMLSAG00000001225-683991Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005333EMLSAE00000005333-714261Lepeophtheirus salmonisexon
EMLSAE00000005334EMLSAE00000005334-714262Lepeophtheirus salmonisexon
EMLSAE00000005335EMLSAE00000005335-714263Lepeophtheirus salmonisexon
EMLSAE00000005336EMLSAE00000005336-714264Lepeophtheirus salmonisexon
EMLSAE00000005337EMLSAE00000005337-714265Lepeophtheirus salmonisexon
EMLSAE00000005338EMLSAE00000005338-714266Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777487auto777487Lepeophtheirus salmonispolypeptide
EMLSAP00000001225EMLSAP00000001225Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001225

>EMLSAP00000001225 ID=EMLSAP00000001225|Name=EMLSAP00000001225|organism=Lepeophtheirus salmonis|type=polypeptide|length=233bp
MSDADWDAEDFEPQLRTKKAICDKWDGEDEDDDIKDSWDKESDEDEVKSE
KTAQESAAYQAKKKKKISDIIAEREASKSYQMEEMAQLEKEKAYAETPEG
KAEEKLRLLQLEERVNLDLAKDMMGVSLNLNIDGMNPSTKDDFAQFEKAL
IEKISTFSAAPYYTDFIENFLRNLCADLSSTNLKKIKLSFDALHSAKLKE
EKAAKNKKKPTVKMDLRKDYYVDDGSYDMDDFM
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mRNA from alignment at LSalAtl2s11:418721..420478-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001225-697072 ID=EMLSAT00000001225-697072|Name=EMLSAT00000001225|organism=Lepeophtheirus salmonis|type=mRNA|length=1758bp|location=Sequence derived from alignment at LSalAtl2s11:418721..420478- (Lepeophtheirus salmonis)
CGTATTATCAATGAATTCACGTGGAATTTGAAGGACAATATCGTCATGTC TGACGCCGATTGGGGTAAGCAATTATTATATTTATAATTAATGTTTGTAT GTATTCAATCTTTTAATGGTATTTTTTTAATAGATGCGGAGGATTTTGAA CCGCAGTTGCGGACTAAAAAAGCTATATGTGACAAGTGGGATGGTGAAGA TGAGGACGATGATATCAAGGTGGGTTTGGGTTGAATTCCACTCTGCTTTA CCTACTATTACAATCATTTTCTTTGGATACAGCGTTAAAAGTATCTTTAG AATTCTTATCAAGAACTGTGACAGATGAATTAATGCCCAAAATATAATAA TGATGACTAATAAGGTTTACATTTAAACTGATGCTATGCTAATTATAGGA CTCCTGGGACAAGGAATCAGATGAAGATGAGGTCAAATCAGAAAAAACAG CTCAAGAATCCGCTGCTTATCAAGCAAAGAAGAAAAAGAAGATATCTGAC ATCATTGCTGAGAGAGAGGCCTCCAAGAGTTATCAAATGGAAGAAATGGC CCAGTTAGAAAAAGAAAAAGCATATGCAGAAACTCCAGAAGGAAAAGCTG AGGAAAAGCTTCGATTACTTCAATTGGAAGAAAGAGTCAACCTTGACCTG GCTAAAGATATGATGGGTTAGTCGATCCTTTTAAACCTGTTCCTCTCTTA TGGAATAGTAAGAGGGAAGACATTTCATTATCTTCTTTTTTGCCTAGGTG TTTCTTTGAATTTGAATATCGATGGAATGAATCCTTCAACAAAAGATGAT TTTGCTCAGTTTGAAAAAGCCTTAATAGAAAAAATTAGTACATTCTCTGC GGCACCATATTACACTGATTTTATTGAGAATTTTCTTAGGAATTTGTGTG CTGACTGTAAGTTGACTGCTTTTTTAACTTTAATTGCTTTTATTTCTGCT ATTTCTCTTAATAATTTAAATCAATGACATTGTCGTTTTGGATACATTTA TGTCACGATGGTTGTTTATTTCATTTTTTTTTTTTGTGACGTCCTTATTT CCCAAACTGCATTTAGGTTAGAGAAGCATAGGATCTTGTTTCTCTGAATT ACTATTAACCAAACTTTGGCAAACATAAGATAAGTTTCCGTTTTGAGATA ACGTTTTTATCATAAATGTATTTCTTAACTTTTGATATCCTCCCCACCTC TTTTTTTCACATTAATACATTTTGAGATTTCAAAAAAACTGATATTCACC AAATACTAATTACTTAGATAAACCATGATATATTGTCCTTGATTGAATAC TCAAGAGTATTCAATGTCCAATTTACTCATTTTATTTAAACGATACAATT TATGCGAATACTATTATTGAGAGTTTTAATAAGGATATACATAATACGTA ATATAAAATAACTTACTCTCAGGGTAACCCTTCTTCATATAGTTGTGTGA TTTTTATTTCCTACTTAATTCAGATTTCTTTTTAATTTTTCAGTAAGTTC AACTAATCTTAAAAAGATAAAACTGTCATTTGACGCACTTCATTCAGCAA AACTTAAGGAAGAAAAAGCTGCAAAAAATAAGAAAAAGCCCACTGTCAAA ATGGATTTGAGAAAGGTAAGTAATTATTGTTTTTACGAATGAATGTTATG ACAGAATTTATATTTTTCTAATATAGTTTGACATAATTATCTTTTCTTTT AATGTTTCAGGACTATTATGTAGATGATGGCTCATACGATATGGATGACT TTATGTGA
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