EMLSAT00000001239, EMLSAT00000001239-697086 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001239
Unique NameEMLSAT00000001239-697086
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1202supercontigLSalAtl2s1202:102886..103505 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001239 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001239EMLSAG00000001239-684005Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005408EMLSAE00000005408-714336Lepeophtheirus salmonisexon
EMLSAE00000005409EMLSAE00000005409-714337Lepeophtheirus salmonisexon
EMLSAE00000005410EMLSAE00000005410-714338Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772205auto772205Lepeophtheirus salmonispolypeptide
EMLSAP00000001239EMLSAP00000001239Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001239

>EMLSAP00000001239 ID=EMLSAP00000001239|Name=EMLSAP00000001239|organism=Lepeophtheirus salmonis|type=polypeptide|length=166bp
MSSALRKGFSPALRRIHTSVCLRKEKAGRYKATPRRTFGLTYEMSLLPEE
IAHKKSWNSLNTAQLEGTFLERESMGQDLPHKMAVEDMFIRKFMNGTWPD
TFQSEIIIKRTHNLIRIAGITNYFIPAKKMYFLIGYTEEMLSLWLKCPVK
LELQSASQNATIIKHI
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mRNA from alignment at LSalAtl2s1202:102886..103505-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001239-697086 ID=EMLSAT00000001239-697086|Name=EMLSAT00000001239|organism=Lepeophtheirus salmonis|type=mRNA|length=620bp|location=Sequence derived from alignment at LSalAtl2s1202:102886..103505- (Lepeophtheirus salmonis)
ATGTCTTCCGCTTTACGAAAAGGATTTTCCCCGGCATTACGACGGATTCA
TACTAGTGTATGCTTGAGAAAGGAAAAGGCTGGTCGTTATAAGGCCACGC
CAAGACGTACCTTTGGTCTTACCTATGAAATGTCTCTTCTTCCTGAGGAA
ATAGCCCATAAGAAGAGTTGAGTACCATAATATTATCAATGATTAAATTT
ACTAATGCGTTTAAATTCCCTTTGTAGGTTGGAATTCACTCAATACTGCT
CAACTCGAAGGTACATTCTTAGAGCGGGAAAGTATGGGGCAGGTATTTAT
TAAATATTAACTAATAACAAAGTTATTAATTCGGGTTTGCTTGAATAAAG
GATTTGCCACACAAAATGGCCGTTGAGGACATGTTCATTAGGAAGTTCAT
GAACGGGACTTGGCCAGACACCTTTCAATCAGAAATTATCATTAAAAGAA
CCCACAATTTAATACGCATCGCTGGTATCACAAATTACTTCATTCCAGCA
AAGAAAATGTACTTTCTAATTGGTTACACGGAAGAAATGTTGAGCTTATG
GCTCAAGTGTCCAGTGAAGCTTGAGCTTCAGTCCGCATCACAAAACGCAA
CCATTATTAAACATATATAA
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