EMLSAT00000001241, EMLSAT00000001241-697088 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001241
Unique NameEMLSAT00000001241-697088
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1202supercontigLSalAtl2s1202:104366..105690 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001241 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001241EMLSAG00000001241-684007Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005413EMLSAE00000005413-714341Lepeophtheirus salmonisexon
EMLSAE00000005414EMLSAE00000005414-714342Lepeophtheirus salmonisexon
EMLSAE00000005415EMLSAE00000005415-714343Lepeophtheirus salmonisexon
EMLSAE00000005416EMLSAE00000005416-714344Lepeophtheirus salmonisexon
EMLSAE00000005417EMLSAE00000005417-714345Lepeophtheirus salmonisexon
EMLSAE00000005418EMLSAE00000005418-714346Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772236auto772236Lepeophtheirus salmonispolypeptide
EMLSAP00000001241EMLSAP00000001241Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001241

>EMLSAP00000001241 ID=EMLSAP00000001241|Name=EMLSAP00000001241|organism=Lepeophtheirus salmonis|type=polypeptide|length=247bp
MAFALIGLDLEDEGVGXAGLEFTDIVGGVFGGSFRNLTLGGTLDNGLEIG
LTGVRFEVEFLEPLSRFEDDLITFTLELQSDSEVEFFESLSRVEDDLIVF
VLELVEFTGARSVLEFFESLCRVEDDIIVFALLQLAVVISEANILPQILR
RNPFLYSENYFEEGQLDPFSFYWIQVFQKPFWFDRILMQLGLTGPSGKSS
SLSSSRIIGLFFEERDIFILFSLFETETNLDAIKESWNSLCQIQRFD
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mRNA from alignment at LSalAtl2s1202:104366..105690-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001241-697088 ID=EMLSAT00000001241-697088|Name=EMLSAT00000001241|organism=Lepeophtheirus salmonis|type=mRNA|length=1325bp|location=Sequence derived from alignment at LSalAtl2s1202:104366..105690- (Lepeophtheirus salmonis)
ATGGCTTTTGCTCTGAGTTGTTGGATGCATTGCCGCTCTTACCAATCATA
GCAGGTGGTGTCCACTTTGGAATTGTTTTCATTGTATTGAGGCGCGATGC
AGATTTAGGAGTTGATATAACAGGAGTKATTCTATTAGTAGTCGGATTAG
ATTTAGAGGATGAAGGTGTGGGGRWAGCAGGGCTCGAATTCACAGATATA
GTTGGTGGTGTCTTCGGAGGGTCATTTCGTAATTTAACTTTAGGAGGAAC
ACTAGATAATGGTTTAGAAATAGGATTAACAGGAGTCCGATTCGAAGTAG
AGTTCCTTGAACCACTCTCTCGTTTTGAAGATGATTTAATCACTTTTACA
TTAGAATTGCAATCCGATTCCGAAGTAGAGTTTTTTGAATCACTTTCTCG
AGTAGAGGATGATTTAATCGTTTTTGTACTAGAATTAGTTGAATTTACAG
GAGCAAGATCTGTATTAGAGTTTTTTGAATCACTCTGTCGAGTGGAGGAT
GATATAATCGTTTTTGCATTATTACAATTGGCAGTAGTCATATCCGAAGT
AGAATTTTTTGTATCATTCTCTTGAGTGGAAGATGATTTAATTGATTTTG
TATTACAATCATCTTTAGTCTTTTTCTTCCTTTTTGATTCTTTAGGTGAC
TTTTTGGAGTCCTTTTTCTTACTTTTCTTTGAACTTTTTTTCGATTTTTT
TTCAGGCGAATATTCTTCCTCAGATTCTGGTTTATTTGTTGGGATATCTT
CAGAATAAAAGTCATCATCTAAATACTTATTCTTCAGCTTTTTAGAGGAG
GAATCCTTTCCTTTATTCGGAGAATTATTTTGAAGAGGGACAACTTGATC
CCTTTTCCTTTTATTGGATTCAGGTTTTTCAGAAGCCTTTTTGGTTTGAT
CGGATTCTAATGCAACTGGGGTATGAGATGTCTTGCTTTTTTCCTTTTCT
TTGTAAGCCTTAAGACTCACTGGTCCTTCAGGAAAATCATCATCGCTATC
GTCATCCAGGATAATTGGCTTATTCTTTGAAGAACGAGATATTTTTATTT
TATTTTCTTTATTCGAAACTGAAACGGTAAAATGATCATGATTTGTATTA
GAGCCCGAGTCTTCTCTCGACCTTTTTGGACATGAATCACTAGGAGAATG
AGTTACAATGTCCAAAACTTGGAGAGGAGCCCCTGTAAACATGTTTATGC
ATATATTATTAAGTCATGGAAATAATAGACAATTAATGATAAAACAATAA
ATTTAAACTTTTCAGAACCTTGATGCGATAAAGGAATCGTGGAATTCATT
GTGCCAAATTCAGAGGTTCGACTAA
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