EMLSAT00000001242, EMLSAT00000001242-697089 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001242
Unique NameEMLSAT00000001242-697089
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1202supercontigLSalAtl2s1202:105888..108177 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001242 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001242EMLSAG00000001242-684008Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005419EMLSAE00000005419-714347Lepeophtheirus salmonisexon
EMLSAE00000005420EMLSAE00000005420-714348Lepeophtheirus salmonisexon
EMLSAE00000005421EMLSAE00000005421-714349Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772292auto772292Lepeophtheirus salmonispolypeptide
EMLSAP00000001242EMLSAP00000001242Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001242

>EMLSAP00000001242 ID=EMLSAP00000001242|Name=EMLSAP00000001242|organism=Lepeophtheirus salmonis|type=polypeptide|length=464bp
MSTIKIPSHVNTKKARVRKSESSDWNWEDEMLMYDVSNRSSEVKKLRREK
EEKSLKTKEEEDEVKRIAKEKETELLYMREERKLFLGGLAPETIEKDLRK
HFSQFGQLVDVQVMRDREQGGISRGFGFVTFACSFMAETALEQKEHILNX
KKIEPKYATPDIPRYKRTIPELEAQMDEECKNKRSIFVGALKDTIGEEDL
VRYFSGFGKVIRAVKIYDKETGNKKTFGFVDFADFGIVRKVMNVTKHYIQ
GKRIRVELSRPRIEFSHQTKTVFVGGLEDGIDDPELYKYFSEFGFVTRAL
RIPNKDEPKRKEHFIDGHRLRVELALPLINDSLYEKDVVVPGETWMEKVQ
RKLQFAIPDQGTWGTTMNNYEIFVKGGPDVKTVRFKIPRGMLEYVVGMAG
KXIEEXANDTNTRVVVKKPSVGAKNVIFTVTGKSKDVMSAQYIFQQIVKS
NIHKLNTVRPITNS
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mRNA from alignment at LSalAtl2s1202:105888..108177-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001242-697089 ID=EMLSAT00000001242-697089|Name=EMLSAT00000001242|organism=Lepeophtheirus salmonis|type=mRNA|length=2290bp|location=Sequence derived from alignment at LSalAtl2s1202:105888..108177- (Lepeophtheirus salmonis)
ATGTCGACAATCAAGATTCCTTCACATGTGAATACAAAAAAAGCACGTGT
TCGAAAGTCTGAAAGCTCAGATTGGAATTGGGAGGACGAAATGCTCATGT
ATGACGTCTCTAACCGAAGTTCGGAGGTGAAGAAACTGCGAAGAGAAAAG
GAGGAAAAATCCCTCAAGACCAAGGAGGAAGAAGATGAAGTTAAACGGAT
TGCCAAAGAGAAAGAGACGGAACTTTTATATATGAGGGAAGAGAGGAAGC
TCTTTCTTGGAGGTTTAGCTCCAGAGACTATTGAAAAAGATTTGAGGTTA
GATGCTTCAAATTCATGTTTTTTTCTTGTATCTAATAGAAAATATATTTT
TCATCTTCATACAGAAAACATTTTTCACAATTTGGGCAACTAGTGGACGT
ACAAGTAATGCGCGATAGGGAACAAGGTGGAATATCCCGTGGATTTGGCT
TTGTTACATTTGCTTGTTCATTTATGGCRGAAACTGCTTTGGAACAAAAG
GAACATATACTAAATRGTAAAAAGATTGAACCAAAGTATGCAACGCCGGA
CATACCACGTTACAAAAGGACTATTCCCGAATTGGAAGCCCAAATGGATG
AAGAATGCAAAAATAAACGAAGCATATTTGTGGGTGCTTTGAAAGACACT
ATTGGAGAAGAAGACCTCGTTAGATACTTTTCTGGTTTTGGAAAAGTGAT
TCGTGCTGTTAAAATTTACGATAAAGAAACTGGGAATAAGAAAACATTTG
GCTTTGTAGATTTTGCCGATTTTGGTATTGTTCGTAAAGTTATGAATGTT
ACAAAGCATTATATTCAAGGAAAGCGTATTCGAGTTGAGTTGTCCCGACC
CCGTATTGAATTTAGTCATCAAACAAAAACAGTTTTCGTCGGTGGCTTAG
AAGATGGTATCGATGACCCTGAATTGTATAAATATTTTAGTGAGTTCGGA
TTCGTAACAAGAGCTTTAAGGATACCGAACAAGGACGAACCTAAAAGAAA
GTTTGGATTTGTTGACTTTGATGACTATGATGCTGTTGACATTGTAGTAA
GTCAAAGGTAAGTTAATATGAACTAATANNNNNNNNNNNNCAATTTGAAG
CTTTTWTTGAAWTTCGATTACAGAAAAGTTGTCATGTGGTAAGCAAATAA
ACTATGCAGAATTTCATTTTCCTACGATGTCATCTTCATGTGGCACTTTT
AATTTAAATTTTGAAAGGAGTCCAAATTTTAGAAAAAACCTTTTGTGCCA
CTTTTTATACTTTAAAAAAATGTCTACAAAATTATTTTATTTAAATANCG
AATATCTATATTCACTAAGTAGATATTTTTYRTTTWTTTTCTWTAATTTG
ATCAAGATATGCCACCTAAAGATGACCTTATAGGACAATGTAATTTTGAA
TAGGTAATTTCCATACCATATGACAACTTTACCGTACATGAAATTMTAAA
AAAGGGAAAATCAAACTGCTTTATCGTACAAGTTGCAATCGAAAAATGAG
ATGAACAATTTAGAMTATATATTAATTAGATAGTGATTGACTTTTTTWTG
AAAATTACTAATCGTTAAGCTCACTGCGGCAAATGATAAAGATTACAAGT
CCACAGTTATATAAAATATTAATAAATAATAACCGAGTAATTTTAATAGA
TACAAATGAAATGATAGCATCAATTCGTAATTAAAATGACTGATTTCCTA
ATTAAATAAGGGATTATGAGACGTACTAATTGTAACTTGCACACAATATG
TATATATTATAAAAGATTTGAAACGTATATTTGATGATSAATTTTCTATA
TCCATCCATATCATTTGATGATTTCAGAGAGCATTTCATAGACGGACACA
GACTTCGCGTGGAATTAGCATTACCTCTCATAAATGATTCTCTATATGAA
AAAGATGTTGTAGTGCCTGGTGAGACATGGATGGAGAAAGTACAGCGTAA
GCTTCAATTTGCAATCCCTGATCAGGGAACTTGGGGTACAACTATGAACA
ATTACGAAATTTTTGTAAAAGGAGGACCAGATGTGAAAACTGTACGGTTT
AAAATTCCAAGAGGAATGCTGGAATATGTTGTTGGTATGGCTGGCAAAGM
TATAGAAGAAANTGCTAATGATACAAATACTCGTGTTGTCGTTAAAAAAC
CTTCAGTTGGGGCAAAAAATGTTATTTTTACGGTTACAGGGAAATCCAAA
GACGTTATGAGCGCACAATACATCTTTCAACAAATAGTAAAATCAAACAT
ACACAAATTGAATACAGTCAGACCAATAACTAATAGCTAG
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