EMLSAT00000001249, EMLSAT00000001249-697096 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001249
Unique NameEMLSAT00000001249-697096
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1202supercontigLSalAtl2s1202:160783..162215 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001249 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001249EMLSAG00000001249-684015Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005441EMLSAE00000005441-714369Lepeophtheirus salmonisexon
EMLSAE00000005442EMLSAE00000005442-714370Lepeophtheirus salmonisexon
EMLSAE00000005443EMLSAE00000005443-714371Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773571auto773571Lepeophtheirus salmonispolypeptide
EMLSAP00000001249EMLSAP00000001249Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001249

>EMLSAP00000001249 ID=EMLSAP00000001249|Name=EMLSAP00000001249|organism=Lepeophtheirus salmonis|type=polypeptide|length=437bp
MLIIIHLCGLIILADISLAEFGRKEIVLAMNEMPGLMHLRKKYGASKPLK
GARIAGCLHMTIQTAVLMETLIELGADITWSSCNIFSTQDHAAAAMAKAG
IPVYAWKGETDEEYIWCVEQTLTFPDGSPPNMILDDGGDLTNLVHEKYPQ
FLEGIKGVSEETTTGVHNLYKMFKTGKLKVPAINVNDSVTKSKFDNLYGC
RESLVDGIKRATDVMLAGKVALVAGYGDVGKGSAQSLRGFGCRVIITEVD
PINALQAACEGYEVTTMEDAVSRCNIFVTTTGCKDIITAEHFSKMKNDAI
VCNIGHFDCEIDIGWLETSCAAKVNIKPQVDRYTMSNGNHIIVLAEGRLV
NLGCAMGHPSFVMSCSFSNQVLAQIDLWTNPGKYEVGVHILEKKLDEEVA
RSHLDALAIKLTSLTKDQASYLGLNQDGPYKPDHYRY
back to top

mRNA from alignment at LSalAtl2s1202:160783..162215-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001249-697096 ID=EMLSAT00000001249-697096|Name=EMLSAT00000001249|organism=Lepeophtheirus salmonis|type=mRNA|length=1433bp|location=Sequence derived from alignment at LSalAtl2s1202:160783..162215- (Lepeophtheirus salmonis)
ATGTTGATTATAATTCATCTCTGTGGCCTTATTATTTTAGCGGATATCTC
CCTCGCGGAATTCGGTCGGAAAGAGATCGTGTTGGCCATGAATGAAATGC
CCGGACTCATGCATCTCCGTAAGAAGTACGGCGCTTCCAAACCTTTGAAG
GGAGCTCGTATTGCCGGTTGTCTTCACATGACAATTCAAACTGCTGTACT
CATGGAGACACTCATCGAGCTTGGTGCTGATATTACTTGGTCAAGCTGTA
ACATCTTCAGCACCCAAGATCATGCTGCTGCAGCAATGGCAAAGGCTGGC
ATTCCAGTCTATGCTTGGAAAGGAGAGACGGATGAGGAGTACATCTGGTA
AGTACAGGGKCTCCTTMTTTAATATTTGCCAGCCACTCACGAATATTATT
TATACAGGTGTGTTGAACAAACACTCACATTCCCAGATGGAAGTCCACCA
AACATGATCCTCGATGACGGTGGTGATCTTACCAACCTTGTTCATGAAAA
GTATCCTCAATTTCTTGAAGGCATTAAAGGTGTTTCTGAGGAAACTACAA
CGGGTGTTCACAATCTCTACAAAATGTTCAAGACTGGAAAACTAAAGGTT
CCAGCCATCAATGTCAATGACTCAGTAACCAAATCCAAATTTGACAATCT
TTATGGATGTCGCGAATCTCTTGTTGATGGTATTAAGCGTGCAACTGATG
TTATGCTTGCTGGGAAAGTAGCTTTGGTTGCTGGCTACGGGGATGTCGGC
AAGGGATCTGCTCAGTCTCTGAGAGGATTCGGATGTCGTGTCATCATCAC
TGAAGTAGATCCTATTAATGCTCTTCAAGCTGCCTGTGAAGGTTACGAAG
TTACTACAATGGAGGATGCCGTTAGTCGTTGTAACATTTTCGTCACAACT
ACTGGTTGCAAGGACATTATCACTGCAGAACATTTCTCCAAAATGAAGAA
TGATGCTATCGTTTGTAACATTGGACATTTTGATTGTGAAATTGATATTG
GGTGGTTAGAAACTAGCTGTGCTGCAAAAGTGAACATTAAAGTAAGATTT
TCTTTTGACAATTGCATATTTATCATGTCATCATCATTTATTTTTTATAG
CCTCAAGTAGACAGATACACAATGAGTAATGGTAACCACATCATCGTATT
AGCTGAAGGCCGTCTCGTTAACTTGGGTTGTGCCATGGGACATCCTTCAT
TCGTTATGTCCTGCTCCTTCTCAAATCAAGTTTTGGCTCAAATTGATCTT
TGGACCAACCCTGGTAAATACGAAGTTGGTGTTCACATTTTGGAAAAGAA
GCTAGATGAAGAAGTCGCACGAAGCCATTTAGATGCTTTGGCAATTAAAT
TGACCTCATTAACAAAGGATCAAGCCTCTTACTTGGGTCTTAATCAAGAC
GGACCCTACAAGCCAGACCATTACAGATATTAA
back to top
Add to Basket