EMLSAT00000001256, EMLSAT00000001256-697103 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001256
Unique NameEMLSAT00000001256-697103
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1203supercontigLSalAtl2s1203:8575..11443 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001256 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001256EMLSAG00000001256-684022Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005466EMLSAE00000005466-714394Lepeophtheirus salmonisexon
EMLSAE00000005467EMLSAE00000005467-714395Lepeophtheirus salmonisexon
EMLSAE00000005468EMLSAE00000005468-714396Lepeophtheirus salmonisexon
EMLSAE00000005469EMLSAE00000005469-714397Lepeophtheirus salmonisexon
EMLSAE00000005470EMLSAE00000005470-714398Lepeophtheirus salmonisexon
EMLSAE00000005471EMLSAE00000005471-714399Lepeophtheirus salmonisexon
EMLSAE00000005472EMLSAE00000005472-714400Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768796auto768796Lepeophtheirus salmonispolypeptide
EMLSAP00000001256EMLSAP00000001256Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001256

>EMLSAP00000001256 ID=EMLSAP00000001256|Name=EMLSAP00000001256|organism=Lepeophtheirus salmonis|type=polypeptide|length=744bp
MDEEDDPQQWDVFRRRSELEKARKTLGEISGRMDRFVQTEAKSLKGLFRP
EMEIYRLKLKETAMKLMELDPSQWGIKAFDLHWRKGFYSTLKSAFKKEEL
DMEERSRVISLIWRGFSHYQGIISKLGIVPSDFNSSPIHGFSQPAQTSTE
KASEEWARTVFYKCLLCLGDLARYFREMNCGGYLNIARRYYHQALIASSY
KSGMPYNQLGRLSEEEYWGLPSAYYYLRSAMSEDRFDGAEINLKNLLTKN
EKFYLKLNDEDKGQEETELAALLALFSNCVFKLLVDLKMELFGSEDIEDD
DEEEDIEDEDKKNEYEVQVEDGDRKKSASRSILDRFRRKRNRYTSSTDEN
ESEEFVDDDEDSCISEDEFTNSMSSDEDDFILSDNFMNSSDSEEDVMDEE
DDDVVIQQSSVVCSTKDLAKTLGNHSLASCIRLLCLWVMTSPDVIETDEH
SKIFWGRLSKVFNLVDFHNSNKYIENEQINESFDKVDIGSVMIEDFYTRG
LKMFSTYHTNNLNWKKGYIFMDKTDLGLVRIKQLVEFKNWLZEIKKKPKF
TNEKNIKSDGVNSDEEKRNALMESMAHLWLKQEVENLEEKESKMFSPYII
VDHWAIVKHIRTIKNIVAAKKFTVIIPSAVVQELDAMKRTHNGARIAIRN
PWLRAQKKYETTALEDIKYPKRKNKEAWHYFEILECCNYFTRLGSTRTVT
LLSPQEFDMDVNPIELAKLIGIRIEHVKTFRHCIRRNKQRDVKT
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mRNA from alignment at LSalAtl2s1203:8575..11443-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001256-697103 ID=EMLSAT00000001256-697103|Name=EMLSAT00000001256|organism=Lepeophtheirus salmonis|type=mRNA|length=2869bp|location=Sequence derived from alignment at LSalAtl2s1203:8575..11443- (Lepeophtheirus salmonis)
ATGGACGAGGAAGATGATCCCCAACAATGGGACGTATTTCGTCGGCGAAG
TGAATTGGAAAAAGCTCGTAAAACCCTGGGTGAAATATCTGGACGAATGG
ATCGTTTTGTGCAAACGGAGGCTAAGAGTCTCAAAGGACTTTTCCGTCCG
GAAATGGAGATTTATCGCTTAAAGTTAAAGGAAACGGCGATGAAATTGAT
GGAGCTGGATCCATCTCAGTGGGGCATCAAGGCTTTTGATCTCCATTGGA
GAAAGGGATTTTACAGCACTCTGAAATCCGCCTTTAAAAAGGAAGAATTG
GACATGGAAGAGAGGTCCAGAGTCATATCCTTGATATGGAGAGGATTTAG
TCACTATCAGGGAATCATTTCCAAACTGGGAATTGTTCCATCAGACTTTA
ACTCGAGTCCAATCCATGGTTTTTCTCAACCCGCTCGTAATATTCCGCCC
GCCCTTCAATAATTATTTGTGAAATCATTGAATTTCTTTCTATTTCCAGA
GACGTCCACTGAGAAGGCGAGTGAGGAATGGGCGCGGACTGTGTTCTACA
AGTGTCTTTTATGCCTTGGGGATTTAGCTCGCTATTTTAGAGAAATGAAT
TGTGGGGGTTATTTGAATATAGCACGAAGATATTATCACCAAGCACTCAT
AGCCTCTAGTTATAAATCTGGAATGCCCTATAACCAACTAGGGCGTTTAT
CAGAGGAGGAATATTGGGGACTCCCGTCCGCTTATTACTATCTTAGAAGG
TACCCCTTTTATTTTATTTTTACTCCCTACACATTATGAGCTTCTTTGAA
TAATTTTTCCCCCACAGTGCAATGAGTGAAGATCGCTTTGATGGAGCAGA
AATTAATTTGAAAAATTTACTAACAAAAAATGAAAAGTTCTACTTAAAGT
TGAATGATGAGGATAAGGGTCAAGAAGAGACGGAATTGTTTGTTGTGTCC
TTGCTTCATATGATGCGTTGTCTTTCTTTTTGAGCCAGATACCAAGACTT
CTGATTTGAGTGAGATCTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNAAAAAGGATGCCAAACCCTCCTTTATTTCTCTTGCAAGAGC
TGCTCTTCTTGCTTTGTTTTCAAACTGTGTCTTCAAACTACTGGTAGATT
TGAAAATGGAACTCTTTGGATCTGAGGATATTGAGGATGATGATGAAGAA
GAAGATATAGAGGATGAGGATAAAAAGAATGAATATGAGGTTCAGGTGGA
GGATGGGGATCGGAAAAAAAGTGCAAGTAGAAGTATTTTGGATCGATTTC
GTCGAAAAAGAAATCGTTATACAAGTAGCACAGATGAAAATGAATCTGAR
GAATTTGTAGACGATGATGAGGATTCCTGTATATCTGAAGATGAATTTAC
GAACTCAATGTCAAGTGATGAAGATGATTTTATTTTGTCTGATAATTTTA
TGAATTCATCGGATTCCGAGGAGGATGTGATGGATGAAGAGGATGATGAC
GTTGTCATACAACAATCTAGCGTTGTTTGCTCAACCAAGGATCTAGCCAA
AACTTTGGGAAATCATAGTCTAGCTTCATGCATTCGACTACTCTGTCTCT
GGGTTATGACATCTCCAGACGTTATAGAGACAGATGAGCACTCGAAAATA
TTCTGGGGAAGATTGAGTAAAGTATTCAATCTTGTTGACTTCCATAATAG
TAATAAGTACATCGAAAATGAACAAATAAATGAAAGCTTTGATAAAGTAG
ACATTGGTTCTGTTATGATTGAGGATTTTTATACTAGGGGATTGAAAATG
TTTTCTACCTATCACACAAATAATTTAAATTGGAAAAAAGGCTATATATT
TATGGATAAAACAGATTTGGGACTTGTAAGAATAAAGCAACTCGTTGAGT
TTAAAAACTGGCTCSAGGAAATAAAGAAAAAACCTAAATTTACGAACGAA
AAAAATATTAAATCTGATGGCGTTAATTCGGATGAAGAGAAGCGAAATGC
TTTGATGGAGAGTATGGCTCATCTTTGGCTTAAGCAAGAGGTGGAAAACC
TAGAAGAAAAAGAGTCAAAGATGTTTTCTCCTTACATAATTGTTGATCAT
TGGGCTATTGTAAAACATATAAGAACTATCAAAAATATAGTAGCAGCTAA
AAAATTTACTGTTATTATTCCAAGTGCAGGTAGGTCTTATATGACTTGTT
TTTATTTATCTATTAATTGTTCTACTTAGTTGTTCAAGAATTAGATGCGA
TGAAAAGGACTCATAATGGAGCTAGGATTGCAATCCGTTGGCTTGAATGG
CAATTTAAAGAAGGNTATGGGAAGTATATATTGAAAAAATTTAAATTTTG
GGTTTTTTTGTTTTTTTTTTCATGTAAGGTAATCCATGGCTTCGTGCTCA
GAAGAAATATGAAACAACCGCTTTGGAGGATATTAAATATCCTAAAAGGA
AAAATAAAGAAGCTTGGCATTATTTTGAAATTCTCGAATGTTGCAATTAC
TTTACAAGACTTGGTTCTACTCGCACTGTCACCTTATTGTCCCCTCAAGA
GTTCGATATGGATGTTAATCCTATTGAGTTAGCTAAATTAATCGGTAAGA
GAAATGTTCTTAAAAATACCTGTATTCATATATCGTTCTTCATAGGAATT
CGGATCGAACATGTCAAAACTTTCCGTCATTGTATCAGGAGAAATAAGCA
AAGAGATGTCAAAACTTGA
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