EMLSAT00000001260, EMLSAT00000001260-697107 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001260
Unique NameEMLSAT00000001260-697107
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1206supercontigLSalAtl2s1206:18081..19084 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001260 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001260EMLSAG00000001260-684026Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005483EMLSAE00000005483-714411Lepeophtheirus salmonisexon
EMLSAE00000005484EMLSAE00000005484-714412Lepeophtheirus salmonisexon
EMLSAE00000005485EMLSAE00000005485-714413Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769333auto769333Lepeophtheirus salmonispolypeptide
EMLSAP00000001260EMLSAP00000001260Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001260

>EMLSAP00000001260 ID=EMLSAP00000001260|Name=EMLSAP00000001260|organism=Lepeophtheirus salmonis|type=polypeptide|length=174bp
MTSKDKNPMRDVKIRKLCLNICVGESGDRLTRXAKVLESITGQTPVFSKA
RYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELKRDNFSKNG
NFGFGIQEHIDLGIKYDPSIGIYGMDFYIVLGRAGMNVRHRRAKTGRIGK
SHELVKEDAMKWFQTKYEGVILNK
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mRNA from alignment at LSalAtl2s1206:18081..19084+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001260-697107 ID=EMLSAT00000001260-697107|Name=EMLSAT00000001260|organism=Lepeophtheirus salmonis|type=mRNA|length=1004bp|location=Sequence derived from alignment at LSalAtl2s1206:18081..19084+ (Lepeophtheirus salmonis)
CTGGACTGCTCGTCAGCTGAAATTTTATTATTAGCCTGTTCCTTTTCTCC
CTCTTTCCTTTTCCGTTTTTGCCTTGAGAGATCATAGCCGTGTAAGTAGA
ATTTTTAAAAATAAATATGAAATTCTTTCATCACCCATGCATTTCCTTTT
TCTCTAGGTGGCTCGAAATAGAAAGATGACTTCCAAGGATAAGAACCCTA
TGCGCGATGTGAAGATCCGCAAGCTCTGCTTGAATATCTGTGTGGGTGAG
TCTGGTGATAGGCTCACACGTSCTGCCAAAGTATTGGAGTCCATCACTGG
ACAAACGCCTGTCTTCTCCAAGGCTCGTTACACTGTCAGATCCTTCGGTA
TCAGACGTAACGAAAAAATCGCCGTTCACTGCACTGTGCGTGGAGCAAAG
GCCGAAGAGATCCTCGAAAAGGGACTCAAGGTAAGATCCTTACTCGGGTC
ATCGAATCATACTTTGATACGTTCATTCATTCCAGGTCCGAGAATACGAG
TTGAAGCGGGATAACTTCTCCAAGAACGGAAACTTCGGCTTCGGTATTCA
GGAACACATCGACTTGGGTATCAAGTACGATCCTTCCATTGGTATTTATG
GCATGGACTTTTATATTGTCCTCGGAAGAGCCGGTATGAATGTGCGTCAC
CGTCGTGCCAAGACTGGACGTATTGGCAAGTCCCATGAGTTGGTCAAGGA
AGATGCCATGAAATGGTTTCAAACCAAGTATGAGGGTGTTATTCTTAACA
AATAAACTCTTCCTATGCTCATACTTTATATATCTCTATTCCAACATCCT
TTGTCTCTAAATCGTTGTGTATAATCACGGAAAATATACATCTTAATAAC
TCCGAAATCCTTGTGTATATTTTTGTTTATTAATTGAACTTATGCTTAAT
GATCTTGTCACCGGTGTTTGCTGTTTCTTGCGTATCTTGACTACTATTAT
ATCTGGAAATAGTAATACGTCTGAGACCAGAATAAATTTTTAGTCAGCAC
AGAT
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