EMLSAT00000001261, EMLSAT00000001261-697108 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001261
Unique NameEMLSAT00000001261-697108
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1206supercontigLSalAtl2s1206:20447..25140 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001261 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001261EMLSAG00000001261-684027Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005486EMLSAE00000005486-714414Lepeophtheirus salmonisexon
EMLSAE00000005487EMLSAE00000005487-714415Lepeophtheirus salmonisexon
EMLSAE00000005488EMLSAE00000005488-714416Lepeophtheirus salmonisexon
EMLSAE00000005489EMLSAE00000005489-714417Lepeophtheirus salmonisexon
EMLSAE00000005490EMLSAE00000005490-714418Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769456auto769456Lepeophtheirus salmonispolypeptide
EMLSAP00000001261EMLSAP00000001261Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001261

>EMLSAP00000001261 ID=EMLSAP00000001261|Name=EMLSAP00000001261|organism=Lepeophtheirus salmonis|type=polypeptide|length=571bp
MTDRIVVLLDMDCFYCQVEAKDDPSLAGVPSAVVQHNDWRGGGIIAVNYE
ARAFGVTRNMRGADAKLKCPEIQLVRVPMIREKADLSKYREAGKAVISAI
TQFDSKFIVERASVDEAYLDITPAVEAMESTPISSQTLPNTNVVGFEKNQ
VHKWLEDLNADDTRLSIGAYIMEQVREAVFEKTGFRCSAGIAHNKILAKI
SCGLHKPNQQTVLPHSSVPILYSKLKLTKLRGLGGKFGDQVLNLLNIETA
MELSTINLKTLHKYFDEKTSLWLYRLGQGLDDEPVNGRELPKSIGCSKNF
RGPQKRLDTMEKVIRWMKSLAEELSDRLIKDKEVNARVPKTLNINVGLEG
SKSSVSRGGAFNTFDVDGITDRGLQLIQKLNNATDKEKYWKPPITLLSLN
ASKFEELNGNGTTSISAFFNSKLNVQTQQSEPTCSDSLKHEQKFIKTQLV
SKDNENVEPCSITSDYTNVDPSVLEMLPADIKQEIESQIKRQKNDTEKET
CPKCGITISPFDLPEHLDFHVAKELQKNYQCVVESIPSSKRKSSDSDSKE
SKTANHSISFFYFYEDSKTVF
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mRNA from alignment at LSalAtl2s1206:20447..25140+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001261-697108 ID=EMLSAT00000001261-697108|Name=EMLSAT00000001261|organism=Lepeophtheirus salmonis|type=mRNA|length=4694bp|location=Sequence derived from alignment at LSalAtl2s1206:20447..25140+ (Lepeophtheirus salmonis)
ATTAGTATTAGTATTACAAATTTATAGATAGATTTAAACTAGTGATGATG
TATCCAAGGTGAAAGGAATAATGGATTAAAAGATGAATAGAGAAAAGATC
AAGGAAGACCCATCGAGTCATCATACACGGATACGACTACGAACGGAGAG
CCGTGAATCCCGTCATACAGCAGCAGGTTCTCTGCTCCAAGAATTTGTAA
CACGAGAAGGGGAAATAGAGGAAATTTCTAGTTTGGTGGAGCCTAATTTG
GATTTTGATACGGTTCAATCCTTGATACAATTTAATTTAAAAGTGTCCTC
TAAGTAGAGCAACATGACGGACCGCATTGTTGTTCTCCTGGACATGGACT
GTTTTTATTGCCAGGTAGAAGCAAAGGATGATCCCTCATTAGCTGGTGTT
CCTAGCGCCGTTGTTCAACACAACGATTGGCGGGGTGGAGGCATCATTGC
TGTCAATTATGAGGCTAGAGCCTTTGGAGTAACAAGGAACATGCGGGGTG
CAGATGCTAAACTTAAATGTCCTGAGATTCAATTGGTCAGAGTTCCCATG
ATTCGAGAAAAAGCGGATTTGTCAAAGTATAGAGAAGCTGGAAAAGCAGT
TATCTCTGCAATAACTCAATTCGATTCCAAATTCATCGTTGAAAGAGCTT
CTGTAGATGAGGCCTATCTGGATATTACGCCTGCTGTCGAAGCCATGGAA
TCCACTCCGATTTCCTCCCAAACTCTACCTAATACAAATGTCGTAGGATT
TGAAAAAAATCAAGTCCACAAATGGCTTGAGGATCTTAATGCAGATGACA
CGCGATTGTCCATTGGTGCATATATTATGGAGCAAGTACGTGAAGCTGTA
TTTGAGAAGACGGGATTTCGTTGCTCGGCTGGAATTGCTCATAATAAAAT
ACTTGCAAAGATAAGCTGTGGTCTTCATAAACCTAACCAGCAGACTGTTT
TACCTCATTCATCTGTTCCTATTCTTTACAGTAAATTAAAGTTAACAAAA
CTAAGAGGTCTTGGTGGAAAGTTTGGGGATCAAGTTTTGAATCTTTTAAA
TATCGAAACGGCCATGGAATTATCCACGATTAACTTAAAAACATTACACA
AATATTTTGATGAAAAAACGAGTCTTTGGTTATATAGACTTGGACAGGGT
TTGGATGATGAGCCTGTCAATGGAAGAGAGCTTCCAAAGTCAATAGGCTG
CTCTAAAAACTTTCGTGGTCCTCAAAAAAGACTAGACACTATGGAAAAAG
TGATTCGTTGGATGAAATCGTTGGCGGAAGAATTGTCGGATAGACTGATA
AAAGACAAAGAAGTGAATGCTCGTGTACCCAAAACTCTTAATATTAATGT
TGGCCTTGAGGGTAGTAAATCATCTGTTTCAAGAGGAGGGGCATTTAACA
CATTTGACGTTGATGGTATTACTGATAGAGGACTTCAACTCATTCAGAAG
CTTAACAACGCAACCGACAAAGAAAAATATTGGAAGCCTCCCATTACTCT
ACTAAGCCTGAACGCTAGTAAATTCGAGGAACTAAATGGTAATGGAACCA
CTAGCATTTCTGCATTCTTTAACTCAAAACTGAACGTACAGACTCAACAA
AGTGAGCCAACTTGTTCAGATAGCCTTAAACATGAACAAAAATTCATTAA
AACTCAATTGGTTTCAAAGGATAATGAAAACGTCGAACCTTGTAGCATTA
CTTCAGATTATACAAATGTGGATCCTTCTGTGTTAGAAATGCTTCCAGCT
GATATTAAACAAGAAATAGAGTCTCAGATAAAAAGACAAAAAAATGATAC
AGAAAAAGAAACCTGTCCAAAATGTGGTATAACAATATCTCCTTTCGACC
TACCTGAACATTTAGACTTCCATGTGGCTAAAGAATTGCAAAAAAATTAT
CAATGTGTTGTAGAATCTATTCCTAGTTCCAAACGAAAAAGCTCAGACTC
GGACTCAAAAGAGAGTAAAAAACAAAAGAATATCCTTAGCTTTTTCAATA
AAATCTAATTAATGATTAATTTATTATAATTTCATGAATTGTAACTCAAC
TTTTAAACAAAACTTATCTTCTCATATTCAAAATTGAAATTGTATATTAT
CTTTATATTTTTAGGCAAAACAGCGAATCATTCGATTTCTTTCTTCTATT
TTTATGAAGATTCAAAGTTAGTATTATAATTATAGTAGTATATTATGATA
TGACAAAATCTTATATTTGCAGAACAGTATTTTAAATAAGCATGCTACTT
TCAAAGTCCTGGAAACCACAAATAATTCAACGATCCTTTTGGAGATATTT
TTCCTCAACAGAGGCACCAAGCCAAACAGAAGATGATGGACCATCTCCAA
CTGACCTTGCTCGTGAAAAAATATGGAAAAAAAAAGAGGCTGAAGAGGCA
CAAGGAATATTTCGTGTGCTAGATATTGGACTACCAAATAAATATGATTT
AGATAAAGACACTAAAAAAAGGAGAAAGGAATTCCGTGCTCCTGAGCGAA
AAAAGTCTGATGTAGAATGGAGTAGCGTGTGGCCTGCTCCAAAGACCTTT
CACCCTTATGTTGTTCCATTACCCATAAGACAGGGATTTGTTAATCGAAA
GGAAGGCAAAACTGTTCCCGACAAAAACGCAAATGTAGAGTTAATGAAAA
TCCCTAATTTTCTCCATGCAACTCCTCCAGCCATAAGGCAACATTGTGCT
GCAATTAAAAAGTATTGTACAGAATGGCCAAAGGAGTTGGACACAAATGC
AATAATTGACCGTGCTTTTTCTCTTACAAAAGAAACATCCGATTACTTAA
ACGCCAGTTCATCGTTGAGGGATTTTAGGGCACGCATTACAACTTTTAAA
TTCAAGCTCTCAAATTTATTTTTAGAACCTAAAGCTAAAGATAAAATGAT
TCGTCTTCTGGGTAAGGACTCTAATGTTTTATGTTTACATCACGAAGTTT
TAAAACACTTTTTGTATCTCAGGTACGGAACACTATAATCTTGAAACAGA
TGAGGTTACCATAGTTGTAGATCGATGTCCCTATAGGAAACAAAACTCGG
ATTACTTTAAGTATTTGATTTCTGCCTTATATTTTGAATCATTTAAAGTC
GAGGACTGGGAAAAAATGGGGTTCCTTGATACTCTAAATTTTGAATATGA
GGATCTTTTCGTCGAATACGAAGACAATGACAAGATTGACGATCCTGAGG
TAAAGGACGTCTTTAATCATCTCGTGAATGAAGGAGAAAATTCAAATACT
TTAGCAATACTTAAAAATAATATTGTGAACAAACACTATAGAGTTGAACC
ATATAAGCCTAACACCGATTAAGATCGAATTTCATTAAAAGATCATTATT
AAAAATTATGGCTATTATTTGAATCAAACGCACATCAACATTCTAGTTAG
AATTAAAACTCATCTTTTGTATATTTGCTAGGCTATTAGTAATTAGCTAT
TGAGTAATATGCTAAATGAACATATATACATTTAAAAAATAATTAATTTA
TTAACGTACAAAGTAACATAGAATGAACTAAAAATTAGTGAAAGGACATA
ATGACTTCTTGTAAACATAGATTTTAGCTTTCTCTTCGCAAGGTTTTTGG
GTTTGGCCCTCTTTTAAAAGAGGTAAAAACATTACAGGAGGATCTGTCAC
ATGTATCAAATTCCAATTATTTTGATTTTCAATATTCTTCTGCTCAGGCT
CCCAAATCAGGCTAACTGATGACTTATGTGAAAAAATAAGGTATCCTCCT
GGTTTAACAACTCGAATCCATTCATTTAGTACAAATGGTTTAATATAAGT
TGTAACCGATATACATAAAAGTATATCGAAGACGTTACTTTTAAATGGGA
GAGTATGGAGTAGATCCCCCTGATGCAATGTGTCGTATATGTTCTTTTCT
TTGCATTTAGAAAGCATAGAAAATGAAAAATCGAAGCCTGTTAGATTATT
AAATCCCTCATCATGAAACACCTGACCAATCAATCCATCACCACAACCCA
AATCCAAAATTTTCGAACTTTTAGGTGGCAATGGGGAAATGGCTTGTACA
AAAGACTTGAACACTAGTCTAGGCAAGAAGTACCCCCATTTTTTCATATT
TTTCTCATAATTGACGGCAAAATCTTCATAATACTCTTTGACATCCGTAA
TTTTCATTATAGTTTCATCGTAATTAGTCTGCAGATTCTCATCAAAGAAC
CAAGGATTTCCCTCTACTTTTCCCCACTGCAAGGATAGTCCAACAAAAGA
CTTCTCCTTAGAGATAAATTGGATGCATCGGGGTTCAGAAGAATTAAAAA
ATCTGGAGTTTCTCTCTGTGAGGTCCTCTGTTCCCATGGAAACTCTACCA
GAAACTCCTATTAAAAATTCATCAGATAGTATTCCCCATGGACTCCCAAC
TTGATCTTCTTTCTGGTGGTACACTTTAAGAGCTATATTCTTGGAAGAAA
TGAAGGATTCTTTATCTGGGCCAATGATGGATCCAATAGAAAAAATATAA
TTCGTCTTGCAATCACGAATCTCTTGCCAGTCTAAGAATGGAAGTATCTC
ATTTAAACCATAACAATCATTTAGATTTAATTGCATTGGGACCTCCTTTG
GAATATCAGAGGTCAGTGTATATAGATCGAGATTCAAAGTATCTAAGGAA
TTAATTATGTCTATAAGGCTTTTATGGTAATGATTCAACACTTC
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