EMLSAT00000001262, EMLSAT00000001262-697109 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000001262
Unique Name	EMLSAT00000001262-697109
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1206	supercontig	LSalAtl2s1206:25785..30904 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000001262 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000001262	EMLSAG00000001262-684028	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000005491	EMLSAE00000005491-714419	Lepeophtheirus salmonis	exon
EMLSAE00000005492	EMLSAE00000005492-714420	Lepeophtheirus salmonis	exon
EMLSAE00000005493	EMLSAE00000005493-714421	Lepeophtheirus salmonis	exon
EMLSAE00000005494	EMLSAE00000005494-714422	Lepeophtheirus salmonis	exon
EMLSAE00000005495	EMLSAE00000005495-714423	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto769715	auto769715	Lepeophtheirus salmonis	polypeptide
EMLSAP00000001262	EMLSAP00000001262	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s1206:25785..30904+

protein sequence of EMLSAP00000001262

>EMLSAP00000001262 ID=EMLSAP00000001262|Name=EMLSAP00000001262|organism=Lepeophtheirus salmonis|type=polypeptide|length=191bp
MIRAILVFNNRGKPRVNKFYEYYTETDQQQIIKETFQLVSKRDDNVCNFL
EGGSLIGGSDFKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKC
FENVCELDLIFHMDKVHFILNELVMGGMVLETNMTEILQRIEEQSKLEKE
EAGLSAAPTRAITAVKNMNIPQQIKDIKLPEITQAIKDLKL

mRNA from alignment at LSalAtl2s1206:25785..30904+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000001262-697109 ID=EMLSAT00000001262-697109|Name=EMLSAT00000001262|organism=Lepeophtheirus salmonis|type=mRNA|length=5120bp|location=Sequence derived from alignment at LSalAtl2s1206:25785..30904+ (Lepeophtheirus salmonis)
TAAATTTAAGCTACCCTTCATTTAAAACTCTTATTAATTAATGTATTCTA
ATATCTAATTAACTATTGGGGATTTTTTAAATTTTTACCACTAATAGTTG
TAGAGCCCTACTAAAGCTTAAAGCTCAACTATCTAGCTATAGTGAATGAT
GGCCGACCGGCAGRTGAAATAATAAGTTAGTGTTGTGTTGGAGAGTAAAC
AATGAAAAGAGAAGAGTTCGAATCAATACATCCGTCGGTGGCCTTTTCTT
TTTGTTATTATGACATATTATTCATCCAACAATAAGTAACAACTGCCTGA
TTTGTATTTGACACTTTTGATGCAAGTGGTCTAGTGAAGTTAAAGTTGTA
AGGTGGCATAGCAGAGGGAGTCGGGTGCAACAGGAGTTTCAACAACGACA
TGATTCGAGCAATTCTTGTTTTTAACAATCGTGGTAAACCTAGAGTCAAT
AAGTTTTATGAATATTATGTAAGTTCTTTATATTTAATATTATATTTTAT
CCATTTACCGATTTTTCAAATGTTTTTCATTTACTTTTAGACAGAAACGG
ATCAGCAGCAAATCATCAAAGAGACATTCCAGCTTGTCTCCAAAAGAGAC
GACAATGTTTGTAACTTTTTGGAAGGAGGAAGGTTTGACGAATTCTCTTA
AGTCATTCTCTAATTGAATGTTATTTCTTCTTTATCCTTCATAGTTTGAT
CGGAGGCTCGGATTTCAAACTCATTTATCGTCATTATGCGACTTTATATT
TCGTGTTTTGTGTGGACAGCTCAGAGTCTGAATTAGGGATATTAGATCTA
ATACAAGTATTTGTAGAAACCTTGGACAAATGCTTTGAAAATGTTTGTGA
ACTGGACCTTATCTTCCATATGGACAAAGTATGGTATTATTAAGAATATT
TGATACTCTAAAATTGTTTGTTTCTGAATTTCTAGGTTCACTTTATTCTC
AATGAACTGGTAATGGGGGGCATGGTCCTTGAAACAAATATGACCGAGAT
CTTACAGCGTATTGAAGAGCAAAGTAAACTTGAGAAGGAGGAGGTAGGGT
GATCTCTTGATTTATTTTCTTATTATTATAAGTTCCTTTGTATGTTCGGA
TCTCCCCATCTTTTTATTTCAATTCACGCTCTTTAAAGCCTTTTTTTAAA
GTTGTGCAGATAAAAATGACAGCTCTAATTTATTTTAAAACACCCATTCC
TAATATTCGTGTTTAACCCATATACATAACAAAAAGTCTTAACATACACA
CTAACAAGTTTAAGTAGGACTTTCGTTTTGAATCATATCTTAAAATCAAA
TGGGCAAAATAACTCAAAATAGTTTAGCACTTTGCACTAATTGTGAAGTC
GAAACTTGACGCATTTGTTGTGATTTAACAAAAGATTAATAAAAAGTCAA
ATTTTCTCGCAAATACTGTTCATTTTGTAAAATGTTATACTAAAACTGAA
CAAGAATAAATTAATTACTACTATCTAGATAAATAGTAATGTGGCTTTAA
GTTTAAGTGTTGCCACGATGCTAATATGTTTTATAGCGGTTCTGCTACCA
AAAATAGGGTAGGTATTTCGATACTTTTTCGACTAAAAATGTCATTAAGG
GTAATTCACACACACTTACCGAGAGATTGCAGGACTTTTTTGGGGAATGG
TGAGGGAGGGTTAGCTCGGAAATTTGATGGCTTTATGAAAGGACAATTTT
CCAGTTTAATTTTTTTTTTTTGGGAGGGTGGAGGGTACGTTATCGGCGTA
AATATTTCTTAATGACGTAATAGTATAGGAAGAACTGGTTCCAATATCAA
TTTAGTACAGTACCATTTCGGCATTCTGAACAACACTACATAGTGGTTTC
TTAGATGACACCGTTTCACTGATATCTTTGTAGTTTGGTTGGAGTATGTT
TTTTATTCATTATTTATTGTGTCGTGGTTTTTTAGTTATGATTGTATGGT
ATAATTAGATGTAGCCATCAAAAATACATTAGGTTAGTTATTGGTTTAGT
AATAAACATAAACTATATTAGACTCGCCTTATGAAAGTCCTACAATGTAT
AGTACACACTATCACTTTTTATCAGAGAGTAATCGTAAACTGGATGATTG
ATTGAACTATTAATAATATAATTTATTTAAAGGAATAATTTAAGTGTATT
ATGCAAAATATTTGCTGAGTATTAATTGTATATTGTAGATCCCATAACGC
ACATGAATGAAAAAAGCAGTTAATTGTTGCACCTCCTATAAAATTGATTA
TGTATGTAAGACTCGGCAGTTTATGTAATTATGCCTATGTGATTGGTTCG
ACACAATCTTAATGAAACACTGACTCAAATTGTCTAAAATATGAATAAGA
ACATTATTTTTTAAATGAAGGACAAGCATGCTTCAGTTTAATTAATTCCC
ACTCCTATAATTAATTAATTCATTGACTCCTTCCTTTTGTAGGCAAACCT
TCGATATTACATTGACAAAGTAAAGAAAATACGAGATAAATTTGATTTCA
AGTACCATTATATAATTATTTGTATTTTGTCCTTGGATGTGGTGTTCTTT
TGTACGAGGAGCAGAATGGGTTCATTCAATCGATAACCTATTTTTTTATA
TTGTGTGAATGGGGTTGGGTTGATATATATATATATTGTACATCTTCAAA
CACTAATTAGTCTCAAAAATGAATTTATATCCATCCATCTACTAAAACAA
GTTTAGAATATTATTTACATTTCTTCTAAAAATATTCGCAATACCTTGTA
ACTTGAATATCAAGAAATCTGTTTTTCATTTAGTCTTATTTTTTTTTTTT
TTTTTTTGACCGATTAATTAGTGCGAGATGATGTATTTTACTCATATTGT
GTTTTTCTAGAAAATTGGAAGAAGTAATGCTCTGAGAAGGAGAGCTATGT
TACTCTTGTGCCATCATACAATCATTCCTGCTCTGTTTAACAGACACCAT
TAATTATGTAGGGTTTTTTTTTTCAGTTTATCGACTTTTGAGAAGATTGT
ATTTTTTTTATACATCTCCAAGCCACATTCCCGTTCAGTAGGTATAAATC
ATTTTCTACAAAGAGAATGTATCACGATTGGTTTTGATTTTATTGATTTG
AAAAATCCCTGAATAAAAATTTTAATAAGAGACTATATAAATAAACTTTT
CTTCTATTAGACGGACATACTACAGAAGGGTCCAAAACTAGTTGGACTGA
TTTATATTAAGCCTAATTAATTAATGTCTATTAGAAGTATCTGGAGACGA
AAATGCTGTCTTGGATTAATAACGCCTTTACTGGAGTCTCAATCTGCTTT
CACAAGTGTAGAGATCAAGTACATATTATCAAAATGAGGCTCCTGACTGT
AATAAAAAATTTAAAAGGCCTTTTTTAATCAAACTAAACTTAAATCTTGG
ACTAATATTCACCTTTACAAAATTGTTTAAAATATGTCTCTAGAACTTTT
GTATTATGCGATAGAGGTGCATTTGTTAGTCTCTAGTATGGAACACTCTG
TAGATACATAACATGAAATGATCTTTAGTTGATAGTCTTAAAATGATTAA
TACTAAATATAGTATGTTTTATTTCTAAGAACATCTTCGATTTCAATGGT
CAAAGTTCAATTTATAATGACAAGGCTTGTTGTCGCCTATAATAATTAAT
TATATTATTTTAATGACGAGTCTTTTCTATAATGTGTGTATTTTTATACA
TGCATTTAATGAGGATTTGCTTTGTGATAACATAAATTTGAAACGTTTTT
GAGACCATTTATATTTATACTTGTGTAACCTGGAGATAAAGTATTTATTT
TGTCCTTGATTTAATGTTAATGATTCAATTTAATTAACTCATGACTTATT
AACTCTCATTCTTCCAATAGGCTGGGCTTTCAGCAGCCCCAACTCGAGCC
ATCACTGCTGTAAAGAACATGAATATTCCTCAACAGATAAAAGACATTAA
ATTACCCGAAATTACTCAGGCCATCAAGGATTTGAAATTATGATACACGC
CGGAAGTGTGCACCAAAGAGGGACTCATCCAACATTCCCTCTCATCTTCT
CTCAACTAAATGCAGAGAATGACGTGCACATTTCCAAGATAACGAGAAAC
TACCAAAAATAAAGAAGATTGCCCAACAATTCATTTCATCAATTTAATTA
ATTTCATCCCTAAATTGGTTTGGTAAAAAAACCATGTTTTTAGGCTTAAT
GATTCTGAAAATATGTCATTGATTCTACTTCTAAGAAACGCAATTTTTTG
ATATTTTACGCGTCAAAACTTTTAGATGCATTTAGTGAATGTTTCACTGT
ATTATTTCCTTGTTAATTAATTATTTAAAATACCCAATTTTTCAAGTTTT
TATATTTTTGTATCAATGTTATTTTTTTTTCTTTAAAAATAGTTTAATAG
AACACGAATTTTTATTACTAAATGTACATTCATACATATTTTAAGTATAT
GTATGCCATATATTGATCTAATTTATCTTACAACTTATGAAACACTCATT
GATAGGTCGTTTTTACCTTTTTATATTTCAGTGGTTTTGATATTGTGGCA
TACAATTTTATTTCACTATATAGATATAACAATTGTTTGTAAATGAGAAA
AACCAACTTGAGGTTTGAAGTTTCCTTGTCAAAATCCCTAAGTGTCTCAA
TTCATAATAAAATTTATTATTGGTTTTTTATTTCACGATTTGGTAGATTT
TTTATTAGTCGCATTCATCATCTGAACTTTTGAATAAATCATCATCTGAA
GGAATTTCAATGTTCAAATCATCAAATTCGGGTGCATGGGCCTAGATATC
AAAATATGAGTATTTATGAGTACCTAATATGTAAAACAATTATCTAATAA
ATCTTACAATTTTTGCTAGCATGGCAATACATCTGGTGACCTTGGGAATA
TTTTTCATTTCAAGGAGTTCCTCTGGCTTGAATAGGTACTCTTCAGGAAC
CCCGTACTTTCGAAGATATTTTAATAGTATGTCCACCCTCTCTTGCTTCG
TTTCAAGTATCGTTGTTGGACCTCCCTCCTTAGGAACTGAGTTAAAAATG
ACGTGCTGCAGGACTAAAAAAGGAGATAATATTGTTGCATTTTGTTATAT
ACGGAGTGGTACATTAAAAT

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