EMLSAT00000001270, EMLSAT00000001270-697117 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001270
Unique NameEMLSAT00000001270-697117
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1209supercontigLSalAtl2s1209:74589..75491 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001270 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001270EMLSAG00000001270-684036Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005536EMLSAE00000005536-714464Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771452auto771452Lepeophtheirus salmonispolypeptide
EMLSAP00000001270EMLSAP00000001270Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001270

>EMLSAP00000001270 ID=EMLSAP00000001270|Name=EMLSAP00000001270|organism=Lepeophtheirus salmonis|type=polypeptide|length=300bp
MDIMDLDLGSVSNTSILSLLECPVCLDHITPPIKQCTKGHLVCIDCFPRL
HHCPTCRGNMCEERNLVMEQVSRLLHYPCRYHPMGCKRAFPLSKKGAHEK
DCAYLQLKCPFHGQCAFNGSLSEVVPHLAADHAVNPVPVQPAGTLFYRAK
QFYRRNLWNLIYIWDNNLFRFIVKHIHADIVGRSENCNLLIAHIQYIGPE
SMAARYAYGISLFDANNRRTGHKFEGLVSSTLKALESQCAKDDVFVTTFH
HASNYTDIWGNLNFIIQMKKIVDEVPIDESSTTTPAPSTSPVSAPVLDTS
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mRNA from alignment at LSalAtl2s1209:74589..75491-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001270-697117 ID=EMLSAT00000001270-697117|Name=EMLSAT00000001270|organism=Lepeophtheirus salmonis|type=mRNA|length=903bp|location=Sequence derived from alignment at LSalAtl2s1209:74589..75491- (Lepeophtheirus salmonis)
ATGGATATTATGGACTTAGACCTCGGCTCTGTGTCGAACACTTCAATACT
ATCTTTATTGGAGTGCCCAGTCTGTTTGGATCATATAACACCGCCAATTA
AGCAATGTACTAAGGGGCATCTAGTCTGCATTGACTGTTTCCCAAGGTTG
CATCACTGTCCAACATGCCGTGGCAATATGTGCGAAGAGAGGAATTTAGT
AATGGAGCAAGTATCTAGATTGCTTCATTATCCTTGCCGTTATCATCCCA
TGGGTTGTAAACGTGCGTTTCCATTGAGCAAGAAAGGGGCTCACGAAAAA
GACTGTGCGTACTTGCAGTTAAAATGTCCTTTTCATGGACAATGTGCTTT
TAATGGTTCATTAAGTGAAGTGGTTCCTCATCTTGCAGCCGATCATGCTG
TTAACCCCGTTCCAGTACAACCTGCCGGAACATTATTCTACCGTGCAAAG
CAATTTTACCGTCGTAACCTTTGGAATTTGATTTATATTTGGGACAATAA
CCTATTTCGTTTTATTGTTAAGCATATCCATGCGGATATTGTTGGAAGGA
GTGAAAATTGTAATCTACTCATTGCTCATATACAATACATTGGGCCAGAA
TCTATGGCTGCTCGATACGCCTATGGAATTTCTCTATTCGATGCAAATAA
TAGACGAACGGGTCACAAATTTGAGGGACTCGTCTCTTCCACACTCAAAG
CCCTTGAAAGTCAATGTGCCAAAGATGATGTTTTCGTGACAACATTCCAT
CATGCAAGTAATTACACAGACATATGGGGAAACTTAAACTTCATCATACA
AATGAAAAAAATTGTGGATGAAGTCCCCATAGATGAGAGCAGCACAACAA
CTCCAGCCCCAAGTACATCTCCTGTATCTGCTCCTGTTCTAGATACTTCA
TGA
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