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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s120 | supercontig | LSalAtl2s120:605976..611280 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001276 >EMLSAP00000001276 ID=EMLSAP00000001276|Name=EMLSAP00000001276|organism=Lepeophtheirus salmonis|type=polypeptide|length=1515bp
MKFVVHTFILVIGVVSGNIFEDGMEYIFDTESSAVVGTMDHAPHSSGYSY
KYTMRMQVHGDSIKFGISDMIFSQFNGKHEAGEHPFGSTNFISVNRELPS
FEVKLDSHGLFSSLTLSPKSTIFQRNLVKGLVQKFQLNMDKIKDHGHGFK
SEEASIFGDCETLYSVTHDKIIKSVSHTKDCKNRVHVLVDDWNGHRCNID
PDHPESRENPNGLYSASNTVFMYEKKGDRFSPKAIVGSSSVVAQFFGNEG
VSFIAHSNSTSFLRKVQSSSGDIVVSGETVTDLKYEFEDKDYTWKSERDL
KAREKNLPSGEFFEDKMSNLVEFVKKRLDKVSYIFNDMSTDETYISQAHY
YGMNNXYPAMAEMDYDTLKSVSEGVQADKSEEGVRKYNLFNELLGSLGTS
ASAMLIRDMVMENKFDNYRDAVRVLTAVPFHIRHPSKQLLEEYEKLYDHE
GHQLLKDTIPLVIGHLARVTCEHAGVPHSPASKECFTSVVDKYTDKYLQK
ILSSSDHGKQVQYVSMLFNLRYGNLAEKLKPLIYGETDIKCGHIRSLAFQ
AAVWGAIYNGKGAEYILPIFADTTNSHELRVTALSYFMEANPSTTHFNTI
LAVLYKEHDYEVINFAFTLFEKYSLNIDPCKQKVSSLAKYFMKFLKQYSD
FETSYGIGVSKTYSRQFYQKKYEYSGXYNYWIVGSHKSTMPLVVAMCIDT
SLYGGYSANAMCVHLRIEGLSKAIVRKFKTMSNDVWKVDELQKILMSDMD
IKARPDQPIRVEFMLSFKGALVAFRQYDENSIKEGGALKKLFEDMKSTGD
SYSINHQRAMRIGSLLYQQPLEIGVPVTYINSFTGVFDIQASVKRGNSRG
LMYRDVKYKMNVFAQGSRMMMIQNPYHKNSYGIIQDRIYGSHFPRNFVIG
VNPLKKEFKLSVERPSYKNPLMMMMHAQTTILTRSQYVDDNQDISKYCEN
CKTQTTLSYSPTSVKNRVFMDRECDVTGSYLHGEYFDCEMPSSRGRVLYY
LWRSMMPYNKSPKTFGNGIRMGIRQVRAYFTFFPRAEKCGAMLRWSQSKS
KPVKEIEITMRATAGPNGEKLFFRGRKWAITTIVKAKGEPQDRVYKIIIG
HEFTPGYLKNTFKLKFQRKGVSGIMSDYSMCMNYQNEYPDFSDEFMDYEK
DAIMKLTGQAKVQYGPNEDCNSSPGEIKVSFEHLTTEEARNDMKNTWYYK
KCMEQKNLPSWQGRGDRFPQTEACYLTVWDATTARKYSYKVDFVKMTDRM
NAIVSQFQSIMKTGLLPYWDIDPEIIPSSNAEPHMNFDVTFKENDKMVDV
YMETSQGGHHYDEIPLNFNWYPIMRNLKFTSTLKRLMKYKLIDACTVTTD
SVMTLDNVTYPYTPTSCWTLASGHCSTHPNFAVFTKKSSGSHIDTKIYVG
GHYIEFQSSGPKKIKVMVDGEAXIVGXKEXVHZKDGTQIFKILKWGSTYN
VYSFLKVWVTYDGHYMNVIPAPSVTGQHCGLCGNYNKNKYDEFEGKNSQI
LSNSDQLVEEYKWKC back to topmRNA from alignment at LSalAtl2s120:605976..611280+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001276-697123 ID=EMLSAT00000001276-697123|Name=EMLSAT00000001276|organism=Lepeophtheirus salmonis|type=mRNA|length=5305bp|location=Sequence derived from alignment at LSalAtl2s120:605976..611280+ (Lepeophtheirus salmonis)
ATTTTTGTGTATAAAAACTAGGTACTTTCTCAAATGAAGAACATTGAGGA
ATAGCTTCTCTGATCAAGATGAAGTTCGTTGTTCATACATTTATTTTGGT
CATTGGTAAGGATCCTGACATTATACATGTAGCAAATCAATCAATTTATT
CTATGATTTAGGTGTGGTAAGTGGGAACATCTTTGAAGATGGAATGGAAT
ATATCTTTGACACGGAATCTTCAGCTGTTGTTGGAACCATGGATCATGCT
CCTCACTCATCTGGATATTCTTACAAATACACAATGAGAATGCAAGTTCA
CGGAGACTCTATCAAATTTGGGGTATGTTTTCTTAAAATAAGAAGAATAA
TCATTTTGAAATGCTTTTGCTATATGTAGATCTCGGATATGATATTTTCT
CAATTTAACGGAAAGCATGAGGCTGGAGAACATCCCTTTGGTAGTACTAA
TTTCATTTCTGTTAATCGGGAGTTACCTTCATTCGAAGTGAAGTTAGATT
CACATGGTCTTTTTTCATCATTGACTCTTAGTCCAAAATCGACCATCTTT
CAAAGAAATCTCGTCAAGGGTCTTGTTCAAAAGTTTCAATTGAACATGGA
TAAAATCAAGGATCATGGACATGGATTTAAGTCTGAGGAGGTTAGCACGA
TAAATAAAAAATTGCATAACAGAAATGATATAAATATATTCTTAGGCCTC
TATTTTTGGAGATTGTGAGACTCTGTACTCTGTCACTCATGACAAGATTA
TTAAATCTGTGAGTCACACTAAAGACTGCAAAAATAGGGTTCATGTTTTA
GTTGATGACTGGAATGGTCATCGCTGTAACATTGATCCAGATCACCCTGA
GAGCAGAGAAAATCCTAATGGTCTTTACTCAGCCTCTAATACTGTATTTA
TGTATGAAAAGAAAGGAGATAGATTTAGTCCCAAGGCCATTGTAGGATCA
TCATCTGTTGTAGCTCAATTCTTTGGAAATGAAGGAGTTTCATTCATAGC
TCACTCCAAGTAAGGATTTGACTTGAGTAGCAGAATTATGAAACAACAAT
TAAGTTCTACATCTTTTTTTTCCTTAGTTCAACCTCCTTTTTGAGAAAAG
TTCAAAGTTCCTCTGGAGATATTGTGGTGAGTGGTGAGACAGTAACTGAT
CTTAAGTATGAATTTGAAGACAAGGACTATACTTGGAAGAGTGAAAGAGA
TTTGAAGGCTAGAGAAAAAAACCTGCCTTCCGGAGAATTTTTTGAGGACA
AAATGTCTAATCTTGTCGAATTTGTTAAGAAAAGACTAGACAAAGTCTCA
TATATTTTCAACGACATGTCCACTGATGAGACATATATTTCTCAAGCCCA
CTACTATGGAATGAATAATWTTTATCCAGCCATGGCTGAAATGGACTACG
ACACATTGAAGGTATGTACCTAGATATTATATGTATACCTACATCATACA
GATTTACAATTAAACTTACTTTCAAGTCGGTATCTGAGGGAGTTCAAGCT
GATAAATCAGAAGAAGGTGTTCGTAAATATAATTTATTCAATGAATTATT
GGGAAGTTTGGGTACAAGTGCGTCAGCCATGCTTATTCGTGACATGGTTA
TGGAAAATAAGTTTGACAACTATAGGGATGCAGTTAGAGTTCTGACAGCA
GTTCCATTTCATATTCGTCACCCCTCTAAGCAGCTTTTGGAGGAGTACGA
AAAATTGTATGATCATGAAGGACATCAGCTTTTGAAGGATACAATTCCTT
TGGTCATTGGACACTTGGCAAGAGTAACCTGTGAACATGCAGGTGTTCCT
CATTCTCCTGCCTCCAAGGAATGCTTTACTTCAGTGGTTGATAAATACAC
CGATAAATATTTACAAAAAATCCTTTGTAAGCTATCCGAATACTCTTAAT
TTTGGAACCAACCAGTTAATTTTTTTATTCATTGCATTTAGCTTCTTCTG
ACCATGGTAAGCAAGTCCAGTATGTCAGTATGCTGTTTAATCTCCGTTAT
GGAAATTTGGCTGAGAAGCTGAAGCCCTTGATCTATGGAGAAACTGACAT
AAAATGTGGACATATTCGTTCGCTTGCATTTCAGGCTGCTGTTTGGGGAG
CCATTTATAATGGAAAGGGAGCAGAGTATATTTTGCCCATTTTTGCAGAC
ACAACAAACTCTCATGAGCTCCGTGTAACTGCTTTATCCTACTTTATGGA
AGCAAATCCTTCTACCACTCATTTTAATACCATTCTTGCTGTCCTTTATA
AAGAACACGACTATGAAGTAATTAATTTTGCCTTCACTCTATTTGAAAAA
TATTCCCTCAACATCGATCCTTGCAAACAAAAAGTGTCATCCCTTGCCAA
ATACTTTATGAAGTTTCTAAAGCAATACAGCGACTTTGAAACTAGTTATG
GCATTGGTGTCTCAAAAACCTATAGCCGTCAGTTCTATCAAAAGAAGTAT
GAATATAGTGGTAGSTACAATTACTGGATTGTTGGATCTCACAAATCAAC
TATGCCTTTGGTTGTGGCAATGTGTATTGATACTTCTCTCTACGGAGGAT
ATTCTGCAAATGCAATGTGTGTGCATCTTCGTATTGAAGGCTTATCAAAA
GCAATCGTTCGTAAGTTTAAGACTATGAGCAATGATGTTTGGAAAGTTGA
CGAACTGCAGAAAATCCTTATGTCAGACATGGACATTAAAGCTCGCCCTG
ACCAGCCCATCAGAGTTGAATTCATGCTTTCCTTCAAAGGAGCCCTTGTT
GCATTCAGGCAATATGATGAGAACTCAATCAAAGAAGGAGGTGCTTTAAA
GAAACTTTTTGAAGATATGAAGAGTACTGGAGATTCTTACTCTATCAATC
ATCAGAGAGCAATGAGAATTGGAAGTCTTTTATACCAGCAACCCTTGGAA
ATCGGTGTGCCTGTTACCTATATCAATTCATTCACCGGAGTTTTTGATAT
TCAAGCAAGTGTGAAGAGAGGAAACTCCAGAGGTCTTATGTATAGAGATG
TAAAATATAAAATGAATGTATTTGCTCAAGGCTCAAGAATGATGATGATT
CAAAATCCTTATCATAAAAACTCCTATGGAATCATTCAAGATCGTATCTA
CGGATCTCATTTCCCAAGAAACTTTGTCATTGGTGTTAATCCTCTAAAAA
AAGAATTTAAATTATCTGTTGAAAGACCCTCATATAAAAATCCTTTAATG
ATGATGATGCATGCCCAAACAACTATTCTCACTAGGTCTCAGTATGTTGA
TGATAACCAAGATATTTCTAAATACTGTGAGAACTGTAAAACTCAAACTA
CCCTCTCCTATTCCCCAACATCAGTCAAAAATAGAGTCTTTATGGATCGT
GAATGTGATGTGACTGGTTCTTATCTCCATGGTGAATACTTTGACTGTGA
AATGCCTTCAAGTAGAGGAAGAGTTCTGTACTATTTGTGGAGGTCCATGA
TGCCATATAACAAAAGTCCTAAAACATTTGGTAATGGAATTCGAATGGGT
ATTCGTCAAGTACGTGCATACTTTACATTCTTTCCAAGAGCTGAGAAATG
TGGTGCTATGCTCCGATGGTCACAATCTAAAAGCAAGCCTGTCAAAGAAA
TTGAAATCACAATGCGTGCCACGGCTGGACCAAATGGTGAAAAACTTTTC
TTCAGAGGCCGCAAATGGGCCATCACAACCATTGTGAAGGCAAAGGGAGA
ACCTCAAGATAGAGTTTACAAGATCATCATTGGACATGAGTTCACTCCTG
GATATCTCAAGAATACATTTAAACTCAAATTCCAGAGAAAGGGAGTATCG
GGAATTATGTCTGACTACTCCATGTGTATGAACTATCAAAACGAATATCC
TGATTTCTCTGATGAATTTATGGACTATGAAAAAGATGCTATCATGAAAC
TCACTGGACAAGCTAAAGTTCAATATGGGCCTAATGAAGACTGTAATTCG
TCACCTGGAGAAATTAAGGTATCCTTTGAACATCTCACCACTGAAGAAGC
TCGTAATGATATGAAAAACACTTGGTATTACAAAAAGTGCATGGAACAAA
AGAACCTTCCTTCATGGCAAGGACGAGGTGATCGATTCCCCCAAACAGAA
GCATGCTACTTAACAGTATGGGATGCAACAACAGCAAGAAAATACTCATA
CAAGGTCGATTTCGTAAAGGTACTTCAATCTGAGACGAACAGAAACATAT
TATTTATAACGAATTTATTTTCAGATGACTGATCGTATGAATGCCATCGT
ATCTCAATTCCAAAGTATTATGAAAACTGGTCTTCTGCCTTATTGGGACA
TTGATCCCGAAATCATTCCCTCCTCCAATGCAGAGCCTCACATGAATTTC
GATGTTACATTCAAAGAAAATGATAAAATGGTGGATGTCTACATGGAAAC
TAGTCAAGGAGGACATCATTACGATGAGATTCCTCTCAATTTCAACTGGT
ATCCTATTATGAGGAATTTGAAATTCACCTCAACTTTGAAACGACTCATG
AAATATAAGCTGATTGATGCTTGCACTGTGACAACTGATAGTGTGATGAC
TCTGGACAATGTGACATATCCATACACACCTACCTCATGCTGGACTCTTG
CTTCTGGACATTGTTCTACACATCCAAACTTTGCAGTCTTTACTAAAAAA
TCATCTGGATCCCATATAGATACCAAGATTTACGTAGGAGGTCATTATAT
TGAATTTCAATCAAGTGGTCCAAAGAAAATCAARGTAATGGTTGATGGAG
AGGCTGMTATTGTTGGCGYGAAAGAANAWGTCCACSAAAAGGACGGTACC
CAGATTTTCAAGTATGCCTTGATAAATTAGAAACTATCTAAATAATATAA
CTAACTTTTTATTTCAATAGGATCTTGAAGTGGGGATCGACCTACAATGT
GTATTCCTTCCTCAAGGTATGGGTCACTTATGATGGACATTATATGAATG
TGATTCCTGCACCATCTGTCACAGGCCAACACTGTGGTCTTTGTGGAAAT
TATAACAAAAATAAATATGATGAATTTGAGGGCAAAAATAGTCAGATACT
CTCCAATTCAGATCAACTTGTTGAGGAATATAAATGGAAATGCTAAGCAC
CATCTTGCTACCATATTATGTGTATGACTTATGTTTGGAAATAGTCGCTT
ATAATTCAATTTTTTGAATATTTTAATGAATAAAACATAGAAGTACATTC
AAACTTGTTTGACTTTTTGTTGAAGGGATTTATTTATTATGATATAGATA
TTTACATATCATAATATGATTTTAAAGTATGATCAAAACGTTTAATAAAT
CTCTA back to top
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