EMLSAT00000001278, EMLSAT00000001278-697125 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001278
Unique NameEMLSAT00000001278-697125
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1211supercontigLSalAtl2s1211:157318..159950 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001278 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001278EMLSAG00000001278-684044Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005566EMLSAE00000005566-714494Lepeophtheirus salmonisexon
EMLSAE00000005567EMLSAE00000005567-714495Lepeophtheirus salmonisexon
EMLSAE00000005568EMLSAE00000005568-714496Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773496auto773496Lepeophtheirus salmonispolypeptide
EMLSAP00000001278EMLSAP00000001278Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001278

>EMLSAP00000001278 ID=EMLSAP00000001278|Name=EMLSAP00000001278|organism=Lepeophtheirus salmonis|type=polypeptide|length=145bp
MQLIKCFNYRLLAHLAVLFNILSISSSLGNQIEKRFRPMGFNGGPYSWIG
SSEGPMTSYFAGIKDKRNYVDLQCRGMYDQGMFAQLDRICEDCYNLYKDA
EVHGFCRSDCFSSHTFKQCLQSLLLEKESEFYLEMVEIIGKRRKK
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mRNA from alignment at LSalAtl2s1211:157318..159950+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001278-697125 ID=EMLSAT00000001278-697125|Name=EMLSAT00000001278|organism=Lepeophtheirus salmonis|type=mRNA|length=2633bp|location=Sequence derived from alignment at LSalAtl2s1211:157318..159950+ (Lepeophtheirus salmonis)
TTGAGAATTGCCTGAGATTTGTGGAATTATTTGTATTTTAGTCTATGGGA
TACCCATGAAAGCATTGGGATCAACATTCGCTCTTCTTCAATGATTCCTA
TTATTCATTGTAATACATACATAACTATTCAGAATTTGCTTCKCCTTACM
GGGGGAGTTTAARCAGCCATAAGAGGACTTATTGAGACGTTCAACTCCTT
CTTCAATCTTCAACTCACCACAGTATGGTAAGGAAAGCCTTCAAAAATAC
TTGAGATCAGGGAAGGGCTGCAATTTTTAATTAGCCTTGGAAGTCGTCTT
TGATATATTGACCACCACTCATTTACTTTGCTCGTTTGAGTATCCAAGTA
CTTGAGTTACTTATCCCCTCTTCCTTCCCTCCCCATTATTTCCTTGTTAT
ACAGCGGTGCTCTTAATAATTACACACTTATTTGTCAGAGAAAGCCAAAA
GAAGGGAAGGGAACTTATAAAAACCCTGTTGATCATTCTCTTCCCGCTTT
TATTCAAATTCATCGCGATGACTGATAAGACCGTAAATTTTATTTCATTT
TATCTTGAACAATGTTTTCACATACTATCTGCTTTATTTCTTTTTATTTG
GATTTTATCTTTAATTTTTCCATGTTACAGCAACTCATCAAGTGTTTCAA
TTATCGACTCCTCGCTCATTTAGCGGTCCTTTTCAACATTTTGAGCATCT
CTTCATCGCTTGGAAATCAAATAGAAAAGAGATTTCGTCCTATGGGCTTT
AATGGAGGACCTTATAGTTGGATTGGGTCCTCTGAGGGACCCATGACGTC
CTATTTTGCTGGTATCAAGGATAAAAGAAACTACGTTGATCTTCAATGTC
GTGGAATGTACGATCAAGGAATGTTTGCGCAATTGGATAGGATTTGTGAG
GATTGTTATAATTTGTACAAGGATGCTGAAGTTCATGGGTTTTGTAGGTA
AGGAATCGTCGTTCATTTCCTTTCATAAAGTATGCTATACATTGGGTGAC
ATTGCATTCTTTTTACATCCTGTACAAGGATTTTTTTGTAAGTTTAAATT
GCACATTTGAAAAGTCTATAACTTTCCCAAATAAATATCTTTTTAAAAAT
GAAATCAATATTTTATACAAATGAATATTTAGGATTTCAATCTACTCATA
AAGTAGAAATCCCCTTAGCACAAATACAAGATATAATTTTTCTTTCTCTT
AAAATTGTATTTGGATTACATTGTATTTTCCAACAAATTATCGTCAATTT
ATATCAACAAATCATTCTGATTAATCCCTTGGAGGCACCGTAATTTGTAC
TTACAGTAGCAAAAGTTCATATGCAGAATGAAAGGATCAGAAATTGATAA
TCTAATTTGAAAGGACATATCCAGACTTAATTAAGTATCATTTATCAAAT
GATGACTCTAAAAAATTGATAATATTTTTGAGTTTTTACAAATTTCCATT
GAAATTTGAATACAAAGCCTATAGTGGACAAAAATATGTCTATGAAATAT
TGCGATTGTTTTTGTATTAGGTAACCATATCTATTTTAATGCAACAAGGG
TTGTTCGTATGTCAGTTGGAATGAAAAACAGTCATTTTTGATCAAATGAA
ATCTTGCGTCGAGTGTGTAGCCAGGGTGCACTGTATATAATGCTCCCTGA
TGTATATAATATTCATATGTATTTTTTTAATCTAAGAAATAACAATGTAG
TCATATTAAAGAAAACCGGGAGGAGTTTTGCATGTAGCATCTAGTGTATG
TAACTTAAGCTCAGCCAGGTAGCGCTCTAAAGACTAAAGTACTCCTTGAT
TCATCATTGATGAATAATAACGTCATCCTATTATTTTTCTCAAGATGATA
GTGTTATTCTTTTATTCTTGAGGAAAAAATATAGTTTAATTGAGTAACGA
CGCGTGTGTTTGCTCATAAAATACTATGTGCAACACCGAAGATTTCTTGA
GTAGTTATCTTCTATATTTTTAGACAAGGCTTGTCTCTTCGCCGACGCCT
AATAACTCCCAGGMAGGACTGTTAGTATATACAAACAAGTTATAAGTACT
AAGAATTTCAAGACACTCATTCTTAAGATTTGAAAAGTTTACTCTCATTA
TTTACACATTTAATGAATCATTCATTCATTGACTCAATTGAGGATTAAGA
TCATTTCAAAAATCAAATAAATGTACTAGAATATTTGAAAAATTACAAGA
ATGTCTTACATTTACGTGTTCTTGACAGCTGGGTATAAATTTAAGGAATT
TGTACATATTTTCTCTACTCTATAAATAATACATACTCTAAGTCCCAAAT
TACTTTTTATTCCATCCATGATATGTTGTAGATCTGACTGCTTCAGCTCG
CATACATTCAAGCAATGCCTTCAATCCCTGTTATTAGAAAAAGAGTCTGA
ATTCTACTTGGAAATGGTGGAAATCATTGGAAAACGCAGAAAAAAATAAG
AAGAATATCCTAGCATCTCCTTGAATGTGTATCACAACAGCAAAATGAAT
TAAAAACATCTTAAAATTCTGAGCTTTTCCTTCATTTCTATCACATTAAC
TCCTTAAATTAATTTAATTATATACCATAGTTAATATTATTACAAATATG
GATAATAAATAAATCATTATTATTATTGTAGAA
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