|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1211 | supercontig | LSalAtl2s1211:177823..184435 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001280 >EMLSAP00000001280 ID=EMLSAP00000001280|Name=EMLSAP00000001280|organism=Lepeophtheirus salmonis|type=polypeptide|length=1687bp
METNSRLDRLFILLKSGSSATRESAATQLGRLQSTNPEGLPHLLTRLSSV
FKSPDWEARIAAGNALSAIFKSLEAWDPLEWKXENGERNEDCFSLKGGSS
FLSVLDEEENISFESLNLDSILQRGTFLRSESKNQESPQSSSLQDQRKHL
DDTLGIKSQQLVTNEDLVPEASTPEEDVLAPPPPKRFKWDFESKEQSPND
SPLQPFIQIMFKDLFHESWEIRHGAATALREVLKYHGSSGGKVMNVSACE
NDRFHRIWLRELSVKIICLIALDRFGDFASDTVVAPVRETGAQALGYAIK
VMIEEDVQIVVDILLSLMERREWQCRHGGLLAVKYLLALREANRKKLLAQ
IFPSVFSGLQDTMDDVVSVAASSLLPVAELLPSTLSSSQLSDLTARLWDS
LLDLDDLTASTHSLIKLLSSLLVSLKSDLYVMHSTSSLKDLVPRIYPLLS
HSSSLVRQSALEALETLTSRQDLACSFLPHIIRDLSLHLFQRCLLEHYSR
NLELIESVWKCTCSNTPIGDLLLATCPLYGPWLILISQPPNWPLQLNNNS
NTHFFLGGPDAQLITDLEEKSAYMMRARILAAKLLGFLAGFVVQRVPNMT
YTEDPMNQFVGKIILPNLLNTRSAYHRTTVCLVISEWNSLCSFDKSSLPD
SLKTSFIRFLTEAVSYDETISAFTALQNEASDLLANLKHYNVNINNMDIS
GPLTYEHIQNIIEISDESINKNNKIRPKMKTSLIERKHNVMTTLSSVKKD
QSILGTMTLAAIAGSAVSLCALPEKLHPLIKPLMESIKKESNVQLQNKSA
DKLADVMEICTERSPTSNDKIIKNLIAFVSSDSVLTPQLIQEVEDSGIIT
HFVREKSKLSYSARKKNYGSSKTTQSEEELTTSIVKMKNEIQRRGAIVAL
QAIVKKFGNLIELKIPKLWDSTIAKSFVPPEEDSSNPSDLVNALQALEVM
ISSLHIDLYSTLETSVNCLCNYHAKNVSSSLRYMTARVVAEIASISPKVV
MTTVIKTILPSLEXSHLAHRRGAIEVIICILDKLGVKIVPYIVLLLVPVL
GRMSDTDSQVRLLASNCFATLVRLMPLDSGXXDKEXNCDLFSKEILEKKK
SERKFIHQLMDAKNAEYFHIPERVMDTELLRSYQRSGVNWLAFLNRYKLH
GILCDDMGLGKTLQSICILAGDHYNRINQNMENIPSLVICPPTLRWHWKE
EILKFTKGKFLSPLLYNGNTVNRSSTRTFIEKNNILITSYDIVRKDIEFL
KEIKWNYIILDEGHIIKNAKAKTTIAIKSLSSNHRLILSGTPIQNSVLEI
WSLFDFLMPGYLGSEREFSSKFSKPIIASRESKCSKRDKEAGALATESLH
RQILPFVLRRMKEDVLKDLPPKITQDYYCDLSPLQIRLYEEYTLKQKLDD
LDXNSIKPTSKSHIFQALQYLRKVCNHPKLVSNELSVTQSQDISVAAKLP
ALKELLLECGIGIVEGEDNQLCLASQHRALIFFQLKSMIDIVENDLLKNL
MPSVTYLRLDGSVPTNMRHEIVQRFNNDVSIDILLLSTSVGGLGLNLTGA
DTVIFAEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNTIEEKILGLQ
KFKLKTANTVISSENSSIESMATDQIFDLFSLEENEDQKRRSPESSSRGG
GVKSILQSLPELWDEKQYEEEYDINTFISKSKPSSSS back to topmRNA from alignment at LSalAtl2s1211:177823..184435+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001280-697127 ID=EMLSAT00000001280-697127|Name=EMLSAT00000001280|organism=Lepeophtheirus salmonis|type=mRNA|length=6613bp|location=Sequence derived from alignment at LSalAtl2s1211:177823..184435+ (Lepeophtheirus salmonis)
GTCGATGAGTATTAGGAAATTAATCTATTCGACTGTGTCTATATATGTGA
GCTAACTGGATGTATAATAATCACAGTTATTAGTATTTATTCAGTGTTCT
ATTAATTAAAAATAACAGCATTCCTTTTCTCCATAATGATATACTGTAAG
TTGAAATATTTTCAGTGAAATTATGATGTATAAAAAGAGCTACTAAAATA
GTTATTATAATATAGAACGGAAGAAGAATATGAAGCTAAAGCTGGAGCAG
AGTATGTATTAATAAATAATGTTTTATTGTGTGTTTTACGATGATTTAAT
TTAATATAGGAAGCTGGAACAAGGAAAATATGTATAATTATATGTATAAT
TTTCTTGTCCCAGTTCTTATTCGATCATGAATCATTAATGATTATTTTTG
TCTAGCTGTGGGCAGCTGTGGCTATAGATTTGAAAACTGTGAAAAAGTGC
GTTAGATGGCGTCTCTGGAACTCTCTGTTTTTTTATATATGAAATGGAGA
CAAATTCTCGGTTGGATCGACTTTTCATACTATTGAAATCTGGATCCAGT
GCAACACGAGAAAGTGCAGCGACTCAGCTTGGGAGGCTCCAATCCACCAA
CCCTGAGGGACTACCTCATTTGCTCACTCGCTTGTCCAGTGTGTTTAAAT
CTCCGGATTGGGAGGCACGAATCGCAGCCGGGAATGCTTTGTCCGCAATA
TTCAAGTCCCTGGAGGCATGGGATCCCCTGGAGTGGAAGGRGGAGAATGG
GGAGAGGAATGAGGATTGCTTCAGTTTGAAAGGAGGTTCTTCCTTCTTGA
GTGTCCTGGATGAGGAGGAAAACATTTCCTTCGAGTCTCTCAACCTTGAC
TCCATCCTTCAAAGAGGCACGTTCCTTCGTTCCGAGTCAAAAAATCAAGA
ATCTCCTCAATCCTCCTCCTTGCAAGATCAGCGAAAGCATTTGGATGATA
CTTTGGGCATCAAATCTCAGCAATTAGTTACTAATGAAGATCTCGTGCCC
GAAGCCTCCACTCCGGAAGAAGATGTTCTTGCTCCTCCTCCTCCAAAGAG
ATTCAAGTGGGATTTTGAATCCAAGGAACAGAGTCCCAATGACTCTCCTC
TACAACCTTTCATTCAAATTATGTTTAAAGACTTATTTCATGAATCATGG
GAGATTCGCCATGGGGCAGCGACGGCTCTTAGGGAAGTACTCAAATATCA
TGGAAGCTCTGGAGGAAAAGTCATGAATGTATCCGCCTGCGAAAATGATC
GTTTTCATAGAATTTGGTTAAGAGAACTCTCTGTCAAAATCATTTGTCTT
ATTGCATTAGATCGTTTTGGAGATTTTGCTTCCGACACTGTTGTGGCACC
TGTTAGAGAAACGGGTGCTCAGGCATTAGGCTATGCCATTAAGGTTATGA
TAGAAGAAGACGTGCAAATTGTTGTAGATATTCTTTTGTCCCTTATGGAA
CGGAGAGAATGGCAGTGTCGTCATGGCGGGCTCTTAGCAGTGAAATATCT
TTTAGCATTGAGAGAGGCAAACAGAAAAAAACTTTTAGCTCAAATCTTTC
CCTCCGTTTTTAGTGGTCTTCAAGATACGATGGATGATGTCGTGAGTGTT
GCGGCTTCGTCTTTACTCCCTGTAGCTGAACTACTTCCCTCCACATTAAG
TTCAAGTCAATTATCAGATTTAACTGCACGCTTGTGGGATTCACTTCTTG
ATTTAGACGATCTAACAGCCTCAACTCACTCTCTCATCAAATTACTCTCA
AGTCTTTTAGTTTCATTGAAGAGTGATCTCTATGTCATGCATTCTACCTC
ATCATTAAAAGATTTAGTTCCAAGAATTTATCCTCTTCTGTCACATTCAT
CTAGTCTCGTTCGTCAATCGGCGCTCGAAGCTTTAGAGACACTTACCTCT
CGGCAAGATCTGGCATGCTCATTTTTACCTCACATAATAAGAGATCTCTC
ATTACATCTTTTTCAGCGCTGCTTACTCGAACATTATTCTCGCAATTTAG
AATTAATTGAATCCGTATGGAAGTGTACCTGTAGTAATACTCCAATAGGA
GACTTACTTCTTGCCACATGCCCCTTGTACGGACCTTGGCTCATTCTGAT
TTCACAGCCTCCTAATTGGCCTCTTCAATTAAACAATAACTCCAATACAC
ATTTTTTCCTTGGTGGCCCAGATGCTCAGCTTATCACTGATCTAGAAGAG
AAGTCTGCTTACATGATGCGTGCTCGAATTTTGGCCGCTAAGCTCTTAGG
ATTTTTAGCTGGTTTTGTTGTTCAAAGAGTTCCTAATATGACGTATACAG
AAGACCCCATGAATCAATTTGTTGGTAAAATAATTCTTCCCAATCTACTT
AATACACGATCTGCATATCATCGAACTACTGTTTGTCTCGTTATATCTGA
ATGGAACTCACTTTGTTCTTTTGATAAATCTTCATTACCAGATTCGTTAA
AAACCTCATTCATAAGATTTTTGACTGAAGCAGTGAGCTATGATGAAACC
ATTTCGGCATTTACTGCTTTACAAAATGAAGCCTCTGATCTTTTGGCAAA
CCTCAAGCATTATAATGTAAATATAAACAACATGGATATTTCGGGTCCTT
TAACCTATGAACACATTCAAAATATTATTGAGATATCTGATGAATCTATT
AACAAAAATAATAAAATACGCCCCAAAATGAAAACCTCACTCATTGAAAG
GAAACATAACGTAATGACAACTCTATCCTCAGTTAAAAAGGATCAAAGTA
TTTTAGGAACTATGACTTTAGCTGCAATTGCTGGCTCAGCGGTTTCACTA
TGTGCTCTCCCAGAAAAGCTTCATCCTCTAATTAAACCTCTCATGGAATC
CATTAAGAAAGAGTCAAATGTTCAACTTCAAAACAAATCAGCGGATAAAT
TAGCTGACGTAATGGAAATTTGTACTGAAAGATCTCCAACATCTAATGAT
AAAATTATCAAAAACTTGATAGCCTTTGTTTCTTCGGATAGTGTTTTAAC
CCCTCAGCTTATTCAAGAAGTAGAAGATAGCGGAATTATTACACATTTTG
TTCGTGAAAAATCAAAATTAAGTTATAGTGCAAGGAAGAAAAACTACGGA
AGCTCCAAGACAACTCAATCAGAAGAGGAATTGACAACGTCCATTGTTAA
AATGAAAAATGAAATTCAGAGACGTGGTGCCATTGTAGCTTTACAAGCAA
TAGTCAAAAAGTTTGGGAATCTCATTGAGTTAAAAATACCAAAATTATGG
GATTCTACCATCGCCAAATCTTTTGTTCCTCCGGAAGAAGATAGTTCAAA
TCCATCAGACTTGGTCAATGCCTTACAAGCACTGGAAGTTATGATATCCT
CGTTACATATTGATTTATACTCAACTTTGGAAACATCTGTAAACTGCCTT
TGTAATTATCATGCAAAAAACGTTTCCTCTTCTCTTCGGTATATGACGGC
CAGAGTCGTAGCTGAAATAGCTTCAATATCACCTAAAGTAGTCATGACCA
CGGTAATTAAGACTATTCTTCCTTCATTGGAGGKATCTCACTTGGCACAT
CGCCGAGGAGCAATAGAAGTTATTATTTGTATTCTCGATAAATTAGGAGT
TAAAATAGTCCCCTATATTGTGCTTTTACTAGTTCCTGTTCTAGGAAGAA
TGTCAGATACTGATTCTCAAGTACGCTTATTAGCGTCAAATTGTTTTGCG
ACACTCGTGAGACTCATGCCTCTTGATAGTGGCAGKGRTGACAAAGAANT
TAACTGTGATCTTTTTTCGAAAGAAATACTCGAAAAGAAAAAATCTGAAC
GTAAATTTATACACCAACTCATGGACGCCAAAAATGCAGAATATTTTCAT
ATACCCGAAAGAGTAATGGACACTGAGCTTTTGAGATCTTATCAAAGATC
AGGGGTTAATTGGTTGGCGTTTTTGAATCGCTATAAACTTCATGGCATCC
TGTGTGATGATATGGGTCTTGGAAAAACACTGCAGTCGATATGTATACTT
GCGGGGGATCATTATAACCGGATCAATCAGAACATGGAAAATATTCCTTC
CTTAGTTATCTGTCCCCCAACACTTCGTTGGCACTGGAAGGAAGAAATAC
TTAAATTTACCAAAGGTAAATTTTTATCTCCACTTTTGTATAACGGAAAT
ACCGTGAATAGATCCTCTACACGGACTTTCATCGAAAAAAATAATATTCT
CATTACATCATATGATATTGTACGAAAGGATATTGAATTTCTAAAGGAAA
TTAAGTGGAACTATATTATTCTGGATGAGGGACACATAATCAAAAATGCA
AAGGCCAAAACTACCATAGCAATCAAATCTCTAAGTTCTAATCATAGATT
GATTTTGTCAGGTACACCCATACAAAATTCCGTTTTAGAAATATGGTCTC
TTTTTGATTTCCTTATGCCTGGATATCTAGGCTCAGAGAGAGAATTTAGT
TCGAAATTTAGTAAGCCTATTATAGCAAGTAGAGAATCCAAGTGTTCCAA
GAGGGACAAAGAAGCTGGAGCTCTAGCGACAGAGTCATTACATCGTCAAA
TACTGCCTTTTGTTCTAAGACGCATGAAGGAAGACGTTCTTAAGGATCTA
CCTCCTAAAATTACTCAAGACTATTATTGTGATTTAAGTCCGTTACAAAT
TCGTTTGTATGAAGAATATACTTTAAAGCAAAAACTTGATGACTTGGATG
RGAATAGTATAAAACCGACGTCAAAGTCTCATATTTTCCAAGCACTGCAA
TATTTGCGCAAAGTTTGCAATCATCCTAAGCTTGTTTCGAATGAATTAAG
TGTTACTCAAAGTCAAGATATATCCGTCGCTGCTAAATTGCCTGCCTTGA
AGGAGCTTTTGCTTGAATGTGGTATTGGGATAGTCGAGGGAGAAGATAAT
CAATTATGCTTGGCAAGTCAGCATAGAGCCCTAATTTTTTTCCAGCTCAA
ATCAATGATAGACATTGTTGAAAACGATTTGTTAAAGAATTTAATGCCTT
CAGTCACCTATCTTCGGTTAGATGGGTCCGTTCCCACTAACATGCGACAT
GAAATCGTTCAACGCTTTAATAATGATGTGTCTATTGATATTCTTCTTCT
TTCAACGTCAGTTGGTAATAATCGAATTTTAATTTATTTATCTTCCTACT
GGTGAACAGTTATTTTAATTAATGTTTGTTTATTTTTATAGGTGGATTAG
GGTTAAATCTAACTGGAGCAGATACTGTCATTTTTGCTGAGCATGACTGG
AATCCTATGAAAGATCTACAAGCAATGGACAGAGCTCACCGTATTGGTCA
GAAAAAGGTTAAAAATTCATTTTCTTATTCTATGTGATTATTCATTTTGA
TCCATGTCTACATAGGTAGTCAATGTATATCGACTTATAACGAGAAACAC
AATCGAAGAAAAGATCCTTGGACTGCAAAAGTTCAAATTGAAGACTGCAA
ATACTGTCATTTCTTCAGAGAATTCATCAATAGAATCCATGGCAACGGAT
CAGATATTTGATTTGTTTTCATTGGAAGAGAACGAAGATCAAAAGAGACG
TTCTCCCGAGTCCTCTTCAAGGGGTGGAGGAGTGAAGTCAATTCTGCAAA
GTCTACCAGAGCTATGGGACGAAAAACAATATGAAGAGGAATATGATATA
AACACTTTCATATCCAAGAGCAAACCATCCTCATCCTCATAATATTATTG
GACTTATATATTTTTAATCCATCTCTCTCTCTCTCTTTATAACTATTTAT
CCATTTCAATCAAGTGATTAATCTCATTTGTCTCATTTCAAATGAGTTTT
GAAGGAATAGAAATGTGTACTCATTCGTCTTTATCCTCTTGCTCAGTCAA
AACTACCCATTCATTTATTTTTCTTATAATATACTTATAAACTTTTTATA
TATTTCGAAATGAAGTACAAGAAAATTTATTTTGATAGGTAGATAGAAAT
ACATTTAATCATAGAATAAATATATGTTTTTATGAATGTAACTATACATT
AAAAAATCATTGACAAAAAAATAATGTTCCTTTGCTACTACGACTTTATT
GTTCCTCTTAATATTTAGTTCAAAATCTTTTTCAGAGTCCTCTTTTCTTT
TTAATAGAAAAAAAACCAATCCTTAGAATAATTTATTATTATTAGTACAG
CACATCGTTTGCATACGATTCAATACAATATGCATGTCCTAGGTATTCAG
AAATTTCAAAATATATACGTACAGTAGATATTAACAATCATCTATTTATG
CACCCTTGCGTCATTATTTATTATATTAATTTTTCGGGACTACCTTTTTT
ATATTATTTATAATATTCAAAAACGGTATTCCCTCACCCTATTTTGCTAT
GTATTCTTTGTAAATATATTTAAAAAAATTATTATTGTTTTTTGTCGAGT
CATTAGAATAAAGTAATAAATATATTTCTTTTAGTCATAACTAAGTAACA
ACAACCACTTTTATGACGTCTTGTTTGGAGATAAACATAAGTTTTTATAA
TATCCTTTCCTTCAAAAACTTTGGACCATAAAATATTTTATGTAACCCTT
CAACCTGACTGTTTCGTAAAAGGATTTATGTATATTAGTATTTCCTTATA
AATTGTATGTCAG back to top
|
