EMLSAT00000001287, EMLSAT00000001287-697134 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001287
Unique NameEMLSAT00000001287-697134
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s12140supercontigLSalAtl2s12140:100..1160 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001287 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001287EMLSAG00000001287-684053Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005635EMLSAE00000005635-714563Lepeophtheirus salmonisexon
EMLSAE00000005636EMLSAE00000005636-714564Lepeophtheirus salmonisexon
EMLSAE00000005637EMLSAE00000005637-714565Lepeophtheirus salmonisexon
EMLSAE00000005638EMLSAE00000005638-714566Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767912auto767912Lepeophtheirus salmonispolypeptide
EMLSAP00000001287EMLSAP00000001287Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001287

>EMLSAP00000001287 ID=EMLSAP00000001287|Name=EMLSAP00000001287|organism=Lepeophtheirus salmonis|type=polypeptide|length=185bp
MAAFLTVERMKTSVKNLDELVQQSKINFSVVRNSTVHGYFLNLAKAEDDI
YTAWKDISLKKGAGTVSNEDEGFERVLKDENGLFAFIHDVYNVGYQFYSS
CSYSSISETFGXYSLAIAVRQGSTLSRELSEALIILRNNNFFNDLENXXW
NSSWRDECTAENDSEGITLRSLGGAFICTIIGIIF
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mRNA from alignment at LSalAtl2s12140:100..1160+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001287-697134 ID=EMLSAT00000001287-697134|Name=EMLSAT00000001287|organism=Lepeophtheirus salmonis|type=mRNA|length=1061bp|location=Sequence derived from alignment at LSalAtl2s12140:100..1160+ (Lepeophtheirus salmonis)
AATCCCTTTTTAAGTTTATGGAAGTTCTAAAAAAGGAAGTTTGGGCTCTT
TATTGTAGGTGCTCTTATTTTAAAAGCGTTTCTCCTTTGGTTTCTTGAAA
AATACTCACCCTTTTCTGCTCAAAACAATTTGGACAAATACAATGAGCCT
GTAAGAGTATTTGATCTTAAGGAATCATTTTGGTTTGCAACAACCTCATT
TACACCTCAGGGAGGAGGTAAGGATTTGCCTCCTGCATGTGTGTATCTAT
GTCAAAACTTATTTTTAATTTAATCAGGAGATTTACCAAAACATATATCA
GGACGAATTCTATCATCTACCTACTGGCTCTTTGTCGTTCTAATCCTTGC
AACTTTTACTGCAAATATGGCAGCTTTTTTAACCGTTGAAAGAATGAAAA
CATCCGTCAAAAATTTGGACGAACTTGTACAACAATCCAAAATTAACTTT
TCTGTAGTGAGGAACTCTACTGTACATGGTTATTTTTTGAATTTGGCAAA
AGCTGAGGATGATATTTATACGGCATGGAAGGACATTTCCTTGAAGAGTA
AGAAAAATATTTATTCACGCGTTTGGAATTATCCAGNCGAAGCCAAAATT
TCAACAACTTYTAGAGGYAATAGAAGGAGCTGGTACAGTTAGTAAYGAGG
ATGAAGGATTTGAAAGGGTTCTAAAGGATGAGAATGGACTTTTTGCATTC
ATYCATGATGTGTACAACGTAAATATTCAACTTTCTCTCCCTCAATGGAA
TAATAATTGTCATTCTATCACCCACCTGATAGGTCGGTTATCAATTTTAT
TCAAGTTGCAGTTACTCATCTATAAGTGAAACCTTTGGTGASTATTCCCT
AGCAATAGCTGTTCGTCAAGGAAGTACTTTATCTCGAGAGCTCTCAGAGG
CATTAATTATTCTACGAAATAATAATTTTTTCAATGACCTCGAAAATRAA
WATTGGAACTCCTCCTGGAGAGATGAATGTACAGCTGAGAATGACTCTGA
AGGGATTACACTACGATCTTTGGGAGGTGCTTTCATATGTACTATTATTG
GAATCATATTT
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