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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s1214 | supercontig | LSalAtl2s1214:48338..54824 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000001291 >EMLSAP00000001291 ID=EMLSAP00000001291|Name=EMLSAP00000001291|organism=Lepeophtheirus salmonis|type=polypeptide|length=867bp
MAFLADEMGLGKTIQTIALITYLMEKKKNMGPYLIIVPLSTLSNWILEFG
KWAPSVQIVPYKGSPGSRRKAQSQMRATKFNVLVTTYEYVIRDKSVLAKI
RWKYMIIDEGHRMKNHHCKLTQILNTYYTSNNRLLLTGTPLQNKLPELWA
LLNFLLPSIFKACNTFEQWFNAPFAVTGEKVELNEEETILIIRRLHKVLR
PFLLRRLKKDVESQLPDKVEYIVKCEMSALQRVIYSQMAETGVLITEDRR
DRKGNSGTKALMNTIMQLRKLCNHPFMFQKLEEAYAKHTGLPTNIVTGPD
LYRSSGKFELIDRILPKLKKSGHRVLMFCQMTQCMTIIEDYFNFRGFKFL
RLDGTTKSEERGEMLATFNEKNSEYFIFLLSTRAGGLGLNLQTADTVIIF
DSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNSVEERILAAARYKLNM
DEKVIQAGMFNNRXTGSERRELLXSILRADXADEEEENEAPDDEVVNQMI
ARTEDEFELYQKMDIDRRREEAAAGNQRKARLIEETELPPFLLNQVDEEE
SETPVVPEPNLDLGRRSRTKKDKNYDDQLSDKDWLKVIGVEDEDFEEEED
ENEMSLKKFAKRGKRKRRDDDESSIQQGKSGGGGGNNRRKKRGGGAVTPT
SSSSEQKYIQKKMKKLMDIVIKYQDQDQRVLSDPFIKLPSRKELPDYYEI
IRRPVDISKILQKIEDVKYENLDALEKDFMLLCTNTQKYNEDGSLIYEDS
IVLRSVFTNARERLELETDDEEEIKNTDEDTQSFDSPLNNSGNSKSAEGN
QGNSNNEDQDAMEDDDEEDDEEYIVSRSASKKKKKDKDSAGTPAAKAKKK
KSKKSNYSDEDEEFDDI back to topmRNA from alignment at LSalAtl2s1214:48338..54824+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000001291-697138 ID=EMLSAT00000001291-697138|Name=EMLSAT00000001291|organism=Lepeophtheirus salmonis|type=mRNA|length=6487bp|location=Sequence derived from alignment at LSalAtl2s1214:48338..54824+ (Lepeophtheirus salmonis)
CTCGCTGCTCACGGAAAAAGGGACATGACTGGAAACATTCCCCAGAACCA
AACCAATTCACATCTCTATAACACAAACATCCCGCCAAACCCTAACAGTC
CCAACAACACTCCAAACTCGGGACCCCCCAATAGTAGCAGTCCTAATCCC
AACGGTCCCAGTGCTCCCAATACCAACAATGGTCCCAATGCAAACTCTCG
AATGGCTCCTCATTCCTTCAACATGAATCACTCTCCTTCCTCTAGGCCAC
AGGGCCCGAGTACGCTTAACAGTGGGGGAATGCCCTCTTCGACCAACGCA
AATGCCCCTCCTGCTGCTCCAACTCATCAGGGACCTATACTCACAAGCAA
GTYTAGCCGTATTACGTCTGTACCTAAACCATCTGGAATTGACCCTGTCT
CCCTTCTCAATGAAAGAGAAAACAGGCTAGCTGCTAAAGTTGCTAGTAGG
ATTGACGAGCTCAGCAATTTGCCTGGTACTATCGAAGATGATACACGTAT
GAAGGCAGAGATTGAGTTGAGAGCCTTACGTTTATTGAACTTTCAAAGAA
AGTTGAGAGCTGAATTTGTTGCATGTACTAATAGGGACTCTACATTAGAG
ACAGCAATTAATTTTAAAGCTTACAAGCGTACAAAAAGGCAAGGTCTGAG
AGAAGCAAGAGCCASGGAGAAGTTGGAAAAGCAGCTGCGTCTGGAAGCCG
AAAGAAAAAGAAGGCAAAGGCATCAAGAATATTTGAATGCTGTTTTAGCA
CACGCCAGGGAGTTTCAGAATTTCCATAAAAATAATCAAACTAAGGTTCA
GAAACTCAACAAATCAATACTCGTGTGGCATCTAAATGCGGAGAGGGAAC
AAAAAAAAGAAGCCGAAAGACTTGAAAAAGAGCGTTTACGAGCTTTAATG
GCGGRAGAWGAAGACGCTTACCGAAAACTGATTGATCAAAAGAAAGACAA
GCGATTGGCATTCTTATTGAGTCAAACGGATGAATATATCAATCAACTCA
CTGATATGGTGAAGCAACATAAGAAGGATCAGAAGAAATTAAAACGAGAA
GCCAAAAAGAAACAAAAACAAGAAGAGATGTTGGGAATTTTGGATGATAA
TTCTCAGGCCTCGGATATCAGAATACCTGTTAAAGAAATATCATCTGGTA
AAATTTTGAGAGGAGAAGAGGCACCTCTAGCCTCTGAATTAGAATCCTGG
TTGGAAAAAAATTTAGACTATGTTGAAGTTCCCAGAGATGAAGACTCTGA
AGATGATTCGGATGACGATAATGATAAAATTAAGGAGGATGGCTCAATCA
CAGCTGAAGATGTGATTGAGAAAGCAAAAAAAGAAGACGATGATGCTGTT
GGAGCTCTTCAAGAGGACTATTACTCCATTGCTCACACTGTAACAGAGGA
GATTCATGAACAACCGGCTATACTCATTGGAGGAACTTTAAAAGAATATC
AAGTCAAAGGGTATTTATGACTCTTCTATACTCGATGATTTTATTTTGTT
ATTGTTTTTAAATATAGGCTTKAATGGCTTKTGTCACTGTACAATAATAG
TCTTAATGGCATTTTTAGCCGATGAGATGGGTCTTGGAAAGACTATTCAA
ACAATTGCACTCATTACTTACTTAATGGAAAAGAAGAAAAACATGGGCCC
TTACTTAATCATCGTGCCTCTATCCACATTGTCTAATTGGATATTAGAAT
TTGGTAAATGGGCTCCGTCTGTACAAATTGTTCCATATAAAGGATCTCCT
GGCTCACGTAGGAAGGCTCAGAGTCAAATGCGTGCAACTAAATTTAACGT
TCTTGTAACTACTTATGAATATGTAATTCGAGATAAGTCAGTGTTAGCTA
AGGTAACTACAATTCGTCTTCAATTTTTATAATATTTTTTTTATGTATAA
TTAATTAAAATTATCATTACCTATTTATAGATTCGCTGGAAGTATATGAT
CATTGATGAAGGGCATCGTATGAAAAATCACCATTGCAAGCTAACGCAGA
TTTTAAATACCTATTATACTTCAAACAATAGATTATTATTAACCGGGACT
CCTTTGCAAAATAAACTTCCAGAGTTGTGGGCTTTATTGAACTTTTTGCT
ACCCTCCATCTTTAAAGCTTGTAATACATTTGAGCAATGGTTCAATGCTC
CATTTGCAGTGACTGGTGAAAAAGTTGAATTAAATGAAGAAGAAACTATT
CTTATTATTCGAAGACTTCATAAAGTCCTCAGGCCCTTCCTTCTTCGTCG
GTTAAAAAAAGATGTTGAATCTCAATTACCTGATAAAGTGGAATATATTG
TAAAGTGTGAAATGTCTGCTCTACAGCGTGTTATTTATTCGTAAGTATTT
AAACATTATTCGGTCATCAATTGTTGATTATTTAAACTTTTATACAGGCA
AATGGCGGAAACTGGAGTACTCATTACAGAAGACAGGAGAGATCGTAAAG
GAAATTCTGGAACAAAAGCTCTAATGAATACAATTATGCAACTTAGGAAA
CTCTGCAACCATCCTTTTATGTTTCAAAAACTCGAAGAAGCTTATGCTAA
ACATACTGGACTTCCCACAAATATCGTGACAGGTCCAGATTTGTATCGCT
CTTCTGGGAAATTTGAACTTATTGATAGAATTCTTCCAAAGCTGAAAAAA
TCAGGCCATAGAGTCCTTATGTTTTGCCAAATGACTCAGTGTATGACAAT
TATTGAGGATTATTTTAACTTCAGAGGTTTCAAGTTTCTCCGTCTCGATG
GAACTACAAAGTCTGAAGAGAGGGGTGAAATGTTGGCGACGTTCAATGAG
AAAAATTCAGAGTATTTTATTTTCCTTCTTTCAACGAGAGCTGGCGGATT
AGGTTTAAATCTACAAACCGCTGATACTGTCATCATTTTTGACTCTGACT
GGAATCCCCATCAGGATCTACAAGCTCAAGATCGAGCCCATCGTATTGGC
CAAAAGAATGAAGTGAGAGTTCTTAGACTAATGACTGTAAATTCTGTTGA
AGAGAGAATTTTGGCTGCTGCACGTTATAAATTAAACATGGATGAGAAAG
TTATCCAAGCCGGAATGTTTAACAATAGAYCCACRGGATCTGAGAGAAGA
GAGCTCCTTMAAAGTATTCTAAGAGCTGATRAAGCCGATGAAGAAGAAGA
GAATGAAGCTCCAGATGATGAGGTAGTCAATCAAATGATTGCCAGAACAG
AAGACGAATTTGAATTGTATCAGAAAATGGACATTGACCGGCGACGTGAG
GAAGCTGCTGCAGGAAATCAACGAAAGGCAAGGTTAATAGAGGAGACTGA
ACTTCCTCCCTTTTTATTAAATCAAGTGGATGAGGAAGAATCAGAGACGC
CTGTTGTCCCTGAACCCAATTTAGATCTCGGAAGAAGAAGTCGAACCAAG
AAAGATAAGAATTATGACGATCAGTTGTCAGATAAAGATTGGCTCAAAGT
GATCGGGGTAAGGAGGATAGTGTTGTTGGATGGGATTGTGGTTTCATTTC
AGGTTTATTTTTTAGGTTGAAGATGAAGACTTTGAAGAGGAAGAAGATGA
GAATGAGATGTCCCTCAAGAAATTTGCTAAAAGGGGTAAGAGGAAGCGTC
GTGATGATGATGAAAGCTCCATTCAGCAGGGTAAAAGTGGTGGCGGNGGT
GGKAACAATAGGAGGAAGAAAAGAGGAGGTGGAGCAGTGACTCCAACTTC
ATCATCATCCGAACAAAAATATATTCAGAAGAAAATGAAAAAGCTGATGG
ATATTGTTATCAAATACCAGGACCAAGATCAAAGAGTGTTGAGTGATCCA
TTTATCAAGCTTCCCTCTCGAAAGGAACTACCAGACTACTACGAAATCAT
TCGGCGCCCAGTTGATATATCTAAAATTTTACAAAAGATTGAAGATGTAA
AGGTAATTTAAACTGTTGAAAAGGATGTTTGTTCATGAAAATGTTTTTTC
TATTTATAGTATGAAAATTTGGATGCACTAGAAAAGGACTTTATGCTTCT
TTGCACCAACACTCAAAAGTACAACGAGGATGGATCCCTCATTTATGAGG
ATTCAATTGTACTTCGCTCTGTCTTTACAAATGCTAGAGAAAGACTAGAA
CTAGAAACCGACGACGAAGAAGAAATCAAAAACACGGACGAAGATACTCA
AAGCTTTGATTCTCCTTTGAACAATTCAGGAAACTCAAAATCTGCGGAAG
GGAATCAAGGGAATAGCAACAACGAGGATCAGGATGCAATGGAAGATGAC
GATGAAGAGGATGATGAAGAGTATATTGTTTCCAGGAGTGCTTCGAAAAA
GAAGAAAAAAGACAAAGACTCGGCAGGRACTCCTGCAGCTAAGGCAAAAA
AGAAAAAATCCAAGAAGAGCAATTACTCTGATGAGGATGAGGAGTTCGAC
GATATATAGAAATTGGGAGTCGTGTATTTTATGAATATACCTCTCTTTCT
CTCATCTACTCCTCTTCCTAGTCATTTGTAAAAAGAACAATTATTGGTGG
TGAATTTGCATTTTCTATCGGGGGATTTTGTTTACTAGTATTAAGACATT
CTTATTTTGTGTGTTTGTATCCCTTGTCAATGTTGAAAAAAATCAGATAC
ATTAATTTTTCCTTTTTTATATATGAAAAAGAAAAAATCATTTTGATTCA
ATTTGATTACTAATATTATTTGGTATATGGACATTAATATTGTTATTTAT
TAGTTACATACCGCAAACACTTATTCTCAAAATATCACGGTATATTTTAA
AAAAATGAAAAAAAAGTTTTTCATTCAATAAACACAAGATGCATGAAAAA
AAGTACTCAATAAAAAGAAAATCCGATGTCGCATTTACATATTTGTTTTA
AGGTTTTATAAAAAGAAAAAAATCGAAGTTAATTAGAATAATAGACCTCA
AGAAAAAAAACCAATCAATCACTGACAAGTCAATTTTGATGCTTTTACAC
ATGAAAGTCTATTGTGAGGTTTATTTAATTAAGAACAAAAATGAATAAGA
GTGTAGATCTTCTACATAGTGATTTTATTTAATAAAATAAGGACATCATA
TTTGCGTTAATATATTAATAAATTGATTTTTATGAGGGGTGAATAAACAG
TAAAATGACGACTTTTGGAGTGAGCTCCAGGGTGATGATGATGATCAACG
GACTCAGCTCCTACTTCCGTTGTGGGATTTGTGACTAGAGTTGTACTTTT
TATTCTTCTGTGAAGGGGCCAAAGAAGGGGAAGATGACTCTGACTTGAGC
TGTTGAAGCTCGTGATTTTTTATATCTAATTCTGTTCTCATATCACGAAG
TCGATCGCGCAATTGATCAACTGAAATTCGAMAAGCCTCTTTTAATGACT
CAAATTGTCCTTTTACGAATTGAAGATCCTTTTCCAATAAAAGGATCTTT
CCAGAATTGACTTCATTTTTTGAAGTGAACTGGGATTGTAGGTCCCTCAG
TTCCAATTCTAGCTCCAGTCTTTTTCTTTCAGAAGATTCTAACTTCAAAA
CTGAGTCTTCATAGTTTGAACGTAGATTGAAGAGCTCCTGAACTTTTTCT
TCGAAAAGGTTCAAATAACGGGATCGTATGGACTCCTTCGTCTCTTCATT
CGTTACATTCATTTCCTCTAAACGGGCATTCATTTCCACCTGCATCTCAG
ACATTTGATTCTCATAAAATGACACTTTTTCCACAAGTTGAGTGTCTTTT
TCAGTTAGACTTGATTGCAATCCCTGAATCTGTTCTTTGAGGTMCTCAAT
CTCTACAAGCCCCTGATTTTTTTCCTCAATAACCTTGCTCAATTTAGTCT
CAACCACTTTTTTCCCTTCACGAAGAGCTCTTAAAATATCATTAATGTCA
CAGTATTCATCAATAGCCTTGTTTTTCTCATCTGAGCGAGACTGAAGCTC
AGCTCTACAATTCTCAAGCTCATTTTCAAGTACTAGGACCTGACGCAGAA
CATTGATTTTTTCAGTTTCGTAGCGTTGAAATCTCTCCATGAATTCCTGT
CGCTCCACATCCTTGGCAACTATTTCGTGATTTTTGTCTTCTAACAGAGA
TTCAAGCTCATTCAATCTCAGATTCAAATCCCCAAGTTTAGATTGAAGTT
CGACTCGATCTGACACTAGGAAATGATAGTCTTCTTTTATGGGGCTCTTT
AAACTCTCCTGGAAACTCTCCTTCTCAAGCTTCATTCGTTCCAGTTCGCT
CAAGATCTCTGCCTTTTGACTCTCCAGCTCCGAGAGTCGAGATGAATAAT
TAGGAATCTGCATAGGAGAACTCTGGTTCTTCGTCGTCTCCTCCAGCAAA
TCCTGGAGGATCCCATCCACTGAATGTAAACATTGGCGAAGCCCCTCCAA
AGAATGAGTCTCCTCTTCTCCTTGCGGTGACATTCCCAAGCATTCACTTC
CTAATTAATTAATTGTCTATTGAAGAAAACTGAAAATAGAGGAGTAGGAG
AAACCAAACTTAAAACTATGATGACTAAAGAGTAGAC back to top
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