EMLSAT00000001334, EMLSAT00000001334-697181 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000001334
Unique NameEMLSAT00000001334-697181
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1223supercontigLSalAtl2s1223:259586..261245 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000001334 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000001334EMLSAG00000001334-684100Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000005820EMLSAE00000005820-714748Lepeophtheirus salmonisexon
EMLSAE00000005821EMLSAE00000005821-714749Lepeophtheirus salmonisexon
EMLSAE00000005822EMLSAE00000005822-714750Lepeophtheirus salmonisexon
EMLSAE00000005823EMLSAE00000005823-714751Lepeophtheirus salmonisexon
EMLSAE00000005824EMLSAE00000005824-714752Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775457auto775457Lepeophtheirus salmonispolypeptide
EMLSAP00000001334EMLSAP00000001334Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000001334

>EMLSAP00000001334 ID=EMLSAP00000001334|Name=EMLSAP00000001334|organism=Lepeophtheirus salmonis|type=polypeptide|length=282bp
MAMPFSILLLIITLHFDFTLGLTEEIETFGTLNPSLNQLDQEDPFLINIL
KDKYIVKPPSPETPYNLSYPPDDFPIKYMSGQFRQPVIVNSILKNKKNGF
FVEAGAADGQMFTNTLLFELFHKWTGLLVEPNPDFYESLSYKHRRAYTFP
QCLSTKTTPEIVSWYHRRTIKVQCFPFYSILMAIGNPRIDYFSLDIEGAE
MPVLRTLPWDKVDIGIIDIEVNHMGKVFNGSVSDLTEYMDSVGYKHIETA
GIDYLFRKKSEIKKKKRKRKQIKRIVGDFFYN
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mRNA from alignment at LSalAtl2s1223:259586..261245-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000001334-697181 ID=EMLSAT00000001334-697181|Name=EMLSAT00000001334|organism=Lepeophtheirus salmonis|type=mRNA|length=1660bp|location=Sequence derived from alignment at LSalAtl2s1223:259586..261245- (Lepeophtheirus salmonis)
ATGGCAATGCCTTTTTCAATACTTCTCCTGATAATAACTTTACATTTTGA TTTTACTTTGGGATTAACTGAAGAAATCGAAACATTTGGCACTCTAAATC CCTCTTTAAATCAACTAGATCAAGAGGATCCCTTTCTGATTAATATATTA AAAGATAAGTATATTGTGAAACCTCCATCTCCAGAGACTCCGTACAATTT ATCATACCCTCCAGATGATTTTCCTATTAAGTATATGAGTGGACAATTTC GMCAGCCTGTGATTGTTAACAGCATTTTAAAGTGAGAGCCGGCGTCATCA ATATATCCTGTAGATAATTAATTAAGTGATTATATTGACAATGTTTTATT TAGGAATAAGAAAAATGGATTCTTTGTTGAGGCTGGAGCTGCAGATGGRC AAATGTTCACAAATACTCTCTTGTTTGAACTCTTTCACAAAGTAAGTACA TTACTACTGTTCGAATCAAATAAATGAACAAATCATCATATTTTTTCTAT TTTTTGAAGTGGACAGGTTTGTTGGTGGAACCCAATCCAGACTTTTATGA GTCACTCTCATATAAACATCGGAGAGCCTATACTTTTCCTCAATGCCTAT CAACTAAAACTACACCTGAAATTGTTTCGTTTGATGCATCAGGACTGATC GGAGGAATCATCGAACCAGGTGAGGTCAAAATTAGACACGGACTGATATC AAAATACTTTCCAATTCGATATCACCTCACCAATTAAATAGTGGATTTTT TTAGGCCACTCATTATTGAAGTGCAAAAGTTTTGTAAAGCCGAAAGATAT TTGTATTTTTATGTGGTTTTGCATTGATTTGAACCAGTTCTTGGATCATC ATTTCGCTTACTAGACTACAATTTTTCATCCACCAGTTTTTTATTATATT CCTCAAGCTAGATATTCTTTCAATTGAGGGCATGTTTTCCAAAGATTTGT CGTATTAGCAGTAGCAACTACTTTGCAGTAATCACAGATTTGCTATTGGA GGGCTTGGGCCCCAGTGATTACGACACTGAACTTATTTAACACGATATAA GAATCTGATTGCATCATTTATAATATATATTATATTTTTCCCCAACACAT GAGTTTTCTGATTTCGATCCGTTATATCAGTCCACGTCTAGTGATAATCA TATAAGCTATGTTTACATACTAAAATTTACATTTAATAATAGATAAAATT AAACCTGGGGATATTGATAGACCACCGGATTTAAATCGAAGATGGTATCA TAGGAGAACGATTAAGGTCCAGTGTTTCCCTTTTTACTCCATACTTATGG CTATAGGAAATCCAAGAATTGATTACTTTAGTTTGGATATAGAAGGAGCA GAAATGCCAGTACTCAGAACACTGCCTTGGGATAAGGTTAGACTTGACAC ATATCTACTTATCACAATTGTCTGAATTATTCTCATTCTTATAGGTGGAT ATTGGAATTATTGATATCGAAGTCAATCATATGGGAAAGGTTTTCAACGG ATCTGTATCGGATTTGACGGAATATATGGACAGTGTAGGGTATAAACATA TTGAAACGGCAGGGATTGATTACCTATTCCGTAAGAAATCCGAAATAAAA AAGAAAAAACGCAAAAGAAAACAGATCAAACGAATTGTAGGCGATTTTTT TTATAATTGA
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